Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
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Accession | NC_011027 |
Length | 2,289,249 |
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The map label for this gene is 193212972
Identifier: 193212972
GI number: 193212972
Start: 1434327
End: 1434884
Strand: Direct
Name: 193212972
Synonym: Cpar_1322
Alternate gene names: NA
Gene position: 1434327-1434884 (Clockwise)
Preceding gene: 193212970
Following gene: 193212973
Centisome position: 62.65
GC content: 52.51
Gene sequence:
>558_bases ATGTCATCTATCGAACAAACGCTCGCCTGGACTGAAACCCCTCTGCCCGAATCCCTCAAAACGCTTGATGCTGAAGCACA GGAAGCACTCGCGGGTTATGTTAAAGACGTGGTGAACAATAAAACCGACGGCTTTGACGAACTCTATCACGCCATTGGCT CGATCGTGCGATTCATTCCGCACTTCATCGTCATACCGCTCATGGTCGAACACATCCGCCCGCAGATTTCAGCCGGCGTT TGCCGGACTATGGGCGTCGACCAGGCTGTAGGTTACGCCAACGACCTCCCGCTCGAATACTTCAGCGAAGTTTCACGTCA TATCGATGACGAACTTATGGCCCGCATTTTCGAAAAGATGAAGCGCAACCAGGCCGAAAAAGTGATTCTGTTCGAACTGC TGCACCATCGCTCTCACATGCTTGGCATCGCCGAACACCTCGATGGCCGCCTGCTCCAATTCGTAGCCAAAAACCTCGAA CTGAACGGCTTCTCTGAAAGTGATCCGGATATTTCCACCCACAAAGTGCTGCTGGAAAAAATCCGCGACCTGCGCTGA
Upstream 100 bases:
>100_bases CCATTATTTTGAATACCATTATTGAACGCAGTACTGCGCCGAAAAGCAACCTGCCCGGCATCAACTCCGGCTTTCTGTCG CCGGACAATACTATCCTCCT
Downstream 100 bases:
>100_bases ACAGATCGGTAGCAAAAGGCAAAGCTTGACCCATGCAAGCACTGTTCTCAGCCCGCTGAAAAAGATTTTTTTACGCAAGT GAAAGAAATCGCCAGACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MSSIEQTLAWTETPLPESLKTLDAEAQEALAGYVKDVVNNKTDGFDELYHAIGSIVRFIPHFIVIPLMVEHIRPQISAGV CRTMGVDQAVGYANDLPLEYFSEVSRHIDDELMARIFEKMKRNQAEKVILFELLHHRSHMLGIAEHLDGRLLQFVAKNLE LNGFSESDPDISTHKVLLEKIRDLR
Sequences:
>Translated_185_residues MSSIEQTLAWTETPLPESLKTLDAEAQEALAGYVKDVVNNKTDGFDELYHAIGSIVRFIPHFIVIPLMVEHIRPQISAGV CRTMGVDQAVGYANDLPLEYFSEVSRHIDDELMARIFEKMKRNQAEKVILFELLHHRSHMLGIAEHLDGRLLQFVAKNLE LNGFSESDPDISTHKVLLEKIRDLR >Mature_184_residues SSIEQTLAWTETPLPESLKTLDAEAQEALAGYVKDVVNNKTDGFDELYHAIGSIVRFIPHFIVIPLMVEHIRPQISAGVC RTMGVDQAVGYANDLPLEYFSEVSRHIDDELMARIFEKMKRNQAEKVILFELLHHRSHMLGIAEHLDGRLLQFVAKNLEL NGFSESDPDISTHKVLLEKIRDLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21049; Mature: 20918
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIEQTLAWTETPLPESLKTLDAEAQEALAGYVKDVVNNKTDGFDELYHAIGSIVRFIP CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH HFIVIPLMVEHIRPQISAGVCRTMGVDQAVGYANDLPLEYFSEVSRHIDDELMARIFEKM HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHH KRNQAEKVILFELLHHRSHMLGIAEHLDGRLLQFVAKNLELNGFSESDPDISTHKVLLEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH IRDLR HHCCC >Mature Secondary Structure SSIEQTLAWTETPLPESLKTLDAEAQEALAGYVKDVVNNKTDGFDELYHAIGSIVRFIP CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH HFIVIPLMVEHIRPQISAGVCRTMGVDQAVGYANDLPLEYFSEVSRHIDDELMARIFEKM HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHH KRNQAEKVILFELLHHRSHMLGIAEHLDGRLLQFVAKNLELNGFSESDPDISTHKVLLEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH IRDLR HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA