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The map label for this gene is 193212924

Identifier: 193212924

GI number: 193212924

Start: 1386314

End: 1386868

Strand: Direct

Name: 193212924

Synonym: Cpar_1274

Alternate gene names: NA

Gene position: 1386314-1386868 (Clockwise)

Preceding gene: 193212923

Following gene: 193212926

Centisome position: 60.56

GC content: 60.36

Gene sequence:

>555_bases
ATGATCCGTTCCGTCACCGTCTATTGCAGCTCCAGCAACCTCGCGCCCGAACCCTACTTCAGCCAGGCCGAAGCGCTTGG
CCGCGGACTTGCCGAGCGGAAGATCGATGTGGTCTTCGGTGGCGGAAACGTCGGGCTGATGGGCCACACCGCTGACGCAG
CTCTGAAGGCTGGCGGCACGGTGAAAGGCATCATCCCGCGCTTCCTCGAAGAGCGCGAGGTGGCTCACTCCGGACTGACC
GAGCTGCACGTGGTCGAAACCATGCACCAGCGCAAAATGCTGCTCACCGACTGGGCGGACGCCTTCGTGATTTTACCGGG
CGGACTCGGCACGCTCGACGAGCTGATGGAAATCCTCACCTGGAAGCACCTCGGCCAGCACCACAAACCGATCATCCTGC
TCAACACGGAAGGCTTCTGGGATCAGCTTTTACAATTCTTCGAACGAATCGCTGCCGACCGGATGGTCAAGCCCGGTTAC
GAAAACTACTACGAAGTCTGCAACTCTGCCAGCGACGTGCTCGCGCTGATCGACCGGCAAAACACCAACGCCTGA

Upstream 100 bases:

>100_bases
CCGCCCAACGCCATCGCGTTCTGAAGATCGACGAACCTGCGACCTACCTCTACCGGCGCTCGCCGGACAGCATCACCGGA
ACCTACAAACCAGCCAAATC

Downstream 100 bases:

>100_bases
AAAAATTCAAAGCGAAAAAAAGAAAGGCCGGAACGTCAAATCCCGGCCTTTTCTGTTTCAAATTTTCCGCGCACTAACAC
TACACCGGCGGAACGTTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MIRSVTVYCSSSNLAPEPYFSQAEALGRGLAERKIDVVFGGGNVGLMGHTADAALKAGGTVKGIIPRFLEEREVAHSGLT
ELHVVETMHQRKMLLTDWADAFVILPGGLGTLDELMEILTWKHLGQHHKPIILLNTEGFWDQLLQFFERIAADRMVKPGY
ENYYEVCNSASDVLALIDRQNTNA

Sequences:

>Translated_184_residues
MIRSVTVYCSSSNLAPEPYFSQAEALGRGLAERKIDVVFGGGNVGLMGHTADAALKAGGTVKGIIPRFLEEREVAHSGLT
ELHVVETMHQRKMLLTDWADAFVILPGGLGTLDELMEILTWKHLGQHHKPIILLNTEGFWDQLLQFFERIAADRMVKPGY
ENYYEVCNSASDVLALIDRQNTNA
>Mature_184_residues
MIRSVTVYCSSSNLAPEPYFSQAEALGRGLAERKIDVVFGGGNVGLMGHTADAALKAGGTVKGIIPRFLEEREVAHSGLT
ELHVVETMHQRKMLLTDWADAFVILPGGLGTLDELMEILTWKHLGQHHKPIILLNTEGFWDQLLQFFERIAADRMVKPGY
ENYYEVCNSASDVLALIDRQNTNA

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LOG family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322406, Length=203, Percent_Identity=35.4679802955665, Blast_Score=120, Evalue=9e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 20398; Mature: 20398

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSVTVYCSSSNLAPEPYFSQAEALGRGLAERKIDVVFGGGNVGLMGHTADAALKAGGT
CCCEEEEEECCCCCCCCCCHHHHHHHHCCHHHCEEEEEECCCCEEEECCCHHHHHHCCCC
VKGIIPRFLEEREVAHSGLTELHVVETMHQRKMLLTDWADAFVILPGGLGTLDELMEILT
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHH
WKHLGQHHKPIILLNTEGFWDQLLQFFERIAADRMVKPGYENYYEVCNSASDVLALIDRQ
HHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCC
NTNA
CCCC
>Mature Secondary Structure
MIRSVTVYCSSSNLAPEPYFSQAEALGRGLAERKIDVVFGGGNVGLMGHTADAALKAGGT
CCCEEEEEECCCCCCCCCCHHHHHHHHCCHHHCEEEEEECCCCEEEECCCHHHHHHCCCC
VKGIIPRFLEEREVAHSGLTELHVVETMHQRKMLLTDWADAFVILPGGLGTLDELMEILT
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHH
WKHLGQHHKPIILLNTEGFWDQLLQFFERIAADRMVKPGYENYYEVCNSASDVLALIDRQ
HHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCC
NTNA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 2116366 [H]