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The map label for this gene is oxaA [H]

Identifier: 192289066

GI number: 192289066

Start: 688744

End: 690612

Strand: Reverse

Name: oxaA [H]

Synonym: Rpal_0636

Alternate gene names: 192289066

Gene position: 690612-688744 (Counterclockwise)

Preceding gene: 192289067

Following gene: 192289065

Centisome position: 12.02

GC content: 63.3

Gene sequence:

>1869_bases
ATGTCCGACAATCGCAACACCATCCTCGCCGTCGTTCTGTCGGGCCTCGTGCTGCTCGGCTGGCAGTACTTCTTCAACAT
CCCGCAGATGGAAAAGCAGCGCGCCGCCCAGCAGGCGCAGCAGCAGGCCGCCAAGCAGCAGGCTGAAACCCAAACGCCGG
GCGCAGCTTCACCCGCCGCCGCACCGGCCGCGCCTGGCGCCCCGGGTTCGGCTCCCGCAAGCCCGCAGCAGCAGGCCGCC
GCTCCGACCGTCAGCCGCGAAGCCGCGCTTGCTGCCGGGCCGCGCATCAAGGTCGAAACTCCGCGCCTGTCCGGCTCGAT
CGCGCTAAAGGGCGCCCGGATCGACGATCTGGCGCTGATGCAATATCGCGAAACGGTCGATCCGAAGTCGCCGCCGATCG
AGCTGTTCTCGCCGTCGGGCAGCGCCCGGCCGTATTACGCCGAATTCGGTTGGGTCGGTGCCGCCGGCGCCAGCGTCAAG
CTGCCGGACCACAACACGCTGTGGGAGCAGGAAGGCACCGGGGCACTGACACCGGCCAATCCGGTCACGCTGAAATGGGA
CAACGGCGAAGGTCTCACCTTCCGCCGCCAGATCACCGTCGACGACCGCTATCTGTTCACCGTCAAGGACGACGTCACCA
ACACCGGTGGCGCCCCGGTAACGCTGTATCCGTTCGCGCTGATCTCGCGCCACGGCACCCCGCACGTCGAAGGCTACTAC
ATCCTGCACGAAGGCCTGATCGGCTATCTCGGCGACCAGGGCTTGCAGGAATACAGCTACAGCAAGATTGACGAGGCCAA
GTCGGTCGGCTTCAAGGCGACCAACGGCTGGCTCGGCATCACCGACAAGTACTGGGCCTCGGCGCTGCTGCCCGACACCA
GCGCCCAACTCCAGGCGCGGTTCTCGGCCAACAAGGTCGGCAACGTCACCACCTATCAGACCGATTATCTCGAAGACGCC
CGCACCGTTCCGATCGGCGGCACCGTCACCGCGAACGCACGGCTGTTCGCCGGCGCCAAGGAAGCGCGGGTGGTCGGCAT
CAACTTCCCGTTCGCCGGTCTCGGCGGTTACGACCGCCAGCTCGGCCTGAACCATTTCGACCTGTTGATCGACTGGGGCT
GGTTCTACTTCATCACCAAGCCGATGTTCCTGGCGCTGGACTTCTTCTTCCATCTGGTCGGGAATTTCGGCGTCGCCATT
CTGCTGGTGACGGTGCTGGTCAAGCTCTTGTTCCTGCCGCTCGCCAACAAGTCTTACGCCTCGATGGCGAAGATGAAGGC
GATCCAGCCACAGCTTGCCGCGCTCAAGGAGCGCCACCCCGACGACAAGGTGAAGCAGCAGCAGGAAATGATGGAGATCT
ACCGCAAGGAGAAGATCAATCCGGTCGCCGGATGTCTTCCGATCCTGCTGCAGATCCCGGTGTTCTTCTCGCTGTACAAG
GTGCTGTTCGTTACCATCGAAATGCGGCACGCGCCGTTCTTCGGCTGGATTCACGACCTCTCGGCACCGGATCCGACCAA
CATCTTCAACCTGTTCGGCCTGATCCCCTACGATCCGACCGCGATCCCGGTGCTCGGCCACTATCTTGTGCTCGGTGCCT
GGCCGCTGGTGATGGGCTTCACGATGTGGTTCCAGATGAAGCTGAACCCGCAGCCGCCGGATCCGACCCAGCAGATGATC
TTCGCCTGGATGCCGGTGATCTTCACCTTCATGCTGGCGCACTTCCCGGCCGGTCTGGTGATCTACTGGGCCTGGAACAA
CACTCTTTCGGTGGCGCAGCAGGCCTTCATCATGCAGCGCAACGGCGTGAAGGTGGAGCTCTGGGACAATCTGAGAACCA
GCTTCGCCAAGAAGAAAAAGCCGACCTGA

Upstream 100 bases:

>100_bases
CTGAGCCGCGACTTTGCCGTCATGCTCGGCGATCTGCGCACCGCACTCGAGCGGGTGGCGCGGCGCTCTCCCAAACCCGC
GTGAGTGACGAGACCCGACG

Downstream 100 bases:

>100_bases
GACGACCTCGTCATTCCGGGCTGCGTGCCGTGAGGCGCGCAGCTCTGGAATTTCTAGCTGCACGGCGATTCCGGTTTCGC
TGGTTTCACGAGGGCGCGGA

Product: inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 622; Mature: 621

Protein sequence:

>622_residues
MSDNRNTILAVVLSGLVLLGWQYFFNIPQMEKQRAAQQAQQQAAKQQAETQTPGAASPAAAPAAPGAPGSAPASPQQQAA
APTVSREAALAAGPRIKVETPRLSGSIALKGARIDDLALMQYRETVDPKSPPIELFSPSGSARPYYAEFGWVGAAGASVK
LPDHNTLWEQEGTGALTPANPVTLKWDNGEGLTFRRQITVDDRYLFTVKDDVTNTGGAPVTLYPFALISRHGTPHVEGYY
ILHEGLIGYLGDQGLQEYSYSKIDEAKSVGFKATNGWLGITDKYWASALLPDTSAQLQARFSANKVGNVTTYQTDYLEDA
RTVPIGGTVTANARLFAGAKEARVVGINFPFAGLGGYDRQLGLNHFDLLIDWGWFYFITKPMFLALDFFFHLVGNFGVAI
LLVTVLVKLLFLPLANKSYASMAKMKAIQPQLAALKERHPDDKVKQQQEMMEIYRKEKINPVAGCLPILLQIPVFFSLYK
VLFVTIEMRHAPFFGWIHDLSAPDPTNIFNLFGLIPYDPTAIPVLGHYLVLGAWPLVMGFTMWFQMKLNPQPPDPTQQMI
FAWMPVIFTFMLAHFPAGLVIYWAWNNTLSVAQQAFIMQRNGVKVELWDNLRTSFAKKKKPT

Sequences:

>Translated_622_residues
MSDNRNTILAVVLSGLVLLGWQYFFNIPQMEKQRAAQQAQQQAAKQQAETQTPGAASPAAAPAAPGAPGSAPASPQQQAA
APTVSREAALAAGPRIKVETPRLSGSIALKGARIDDLALMQYRETVDPKSPPIELFSPSGSARPYYAEFGWVGAAGASVK
LPDHNTLWEQEGTGALTPANPVTLKWDNGEGLTFRRQITVDDRYLFTVKDDVTNTGGAPVTLYPFALISRHGTPHVEGYY
ILHEGLIGYLGDQGLQEYSYSKIDEAKSVGFKATNGWLGITDKYWASALLPDTSAQLQARFSANKVGNVTTYQTDYLEDA
RTVPIGGTVTANARLFAGAKEARVVGINFPFAGLGGYDRQLGLNHFDLLIDWGWFYFITKPMFLALDFFFHLVGNFGVAI
LLVTVLVKLLFLPLANKSYASMAKMKAIQPQLAALKERHPDDKVKQQQEMMEIYRKEKINPVAGCLPILLQIPVFFSLYK
VLFVTIEMRHAPFFGWIHDLSAPDPTNIFNLFGLIPYDPTAIPVLGHYLVLGAWPLVMGFTMWFQMKLNPQPPDPTQQMI
FAWMPVIFTFMLAHFPAGLVIYWAWNNTLSVAQQAFIMQRNGVKVELWDNLRTSFAKKKKPT
>Mature_621_residues
SDNRNTILAVVLSGLVLLGWQYFFNIPQMEKQRAAQQAQQQAAKQQAETQTPGAASPAAAPAAPGAPGSAPASPQQQAAA
PTVSREAALAAGPRIKVETPRLSGSIALKGARIDDLALMQYRETVDPKSPPIELFSPSGSARPYYAEFGWVGAAGASVKL
PDHNTLWEQEGTGALTPANPVTLKWDNGEGLTFRRQITVDDRYLFTVKDDVTNTGGAPVTLYPFALISRHGTPHVEGYYI
LHEGLIGYLGDQGLQEYSYSKIDEAKSVGFKATNGWLGITDKYWASALLPDTSAQLQARFSANKVGNVTTYQTDYLEDAR
TVPIGGTVTANARLFAGAKEARVVGINFPFAGLGGYDRQLGLNHFDLLIDWGWFYFITKPMFLALDFFFHLVGNFGVAIL
LVTVLVKLLFLPLANKSYASMAKMKAIQPQLAALKERHPDDKVKQQQEMMEIYRKEKINPVAGCLPILLQIPVFFSLYKV
LFVTIEMRHAPFFGWIHDLSAPDPTNIFNLFGLIPYDPTAIPVLGHYLVLGAWPLVMGFTMWFQMKLNPQPPDPTQQMIF
AWMPVIFTFMLAHFPAGLVIYWAWNNTLSVAQQAFIMQRNGVKVELWDNLRTSFAKKKKPT

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=526, Percent_Identity=30.2281368821293, Blast_Score=228, Evalue=6e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 68751; Mature: 68620

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNRNTILAVVLSGLVLLGWQYFFNIPQMEKQRAAQQAQQQAAKQQAETQTPGAASPAA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
APAAPGAPGSAPASPQQQAAAPTVSREAALAAGPRIKVETPRLSGSIALKGARIDDLALM
CCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHCCCEEEEECCCCCCCEEEECCCCCHHHHH
QYRETVDPKSPPIELFSPSGSARPYYAEFGWVGAAGASVKLPDHNTLWEQEGTGALTPAN
HHHHHCCCCCCCCEEECCCCCCCCEEEECCCEECCCCEEECCCCCCCCCCCCCCCCCCCC
PVTLKWDNGEGLTFRRQITVDDRYLFTVKDDVTNTGGAPVTLYPFALISRHGTPHVEGYY
CEEEEEECCCCEEEEEEEEECCEEEEEEECCCCCCCCCCEEEHHHHHHHCCCCCCCCEEE
ILHEGLIGYLGDQGLQEYSYSKIDEAKSVGFKATNGWLGITDKYWASALLPDTSAQLQAR
EEECCHHHHHCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHCCCCCHHHHHHH
FSANKVGNVTTYQTDYLEDARTVPIGGTVTANARLFAGAKEARVVGINFPFAGLGGYDRQ
HCCCCCCCEEEEEHHHHCCCCCCCCCCEEECCCEEEECCCCCEEEEEECCCCCCCCCCHH
LGLNHFDLLIDWGWFYFITKPMFLALDFFFHLVGNFGVAILLVTVLVKLLFLPLANKSYA
CCCCCEEHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
SMAKMKAIQPQLAALKERHPDDKVKQQQEMMEIYRKEKINPVAGCLPILLQIPVFFSLYK
HHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VLFVTIEMRHAPFFGWIHDLSAPDPTNIFNLFGLIPYDPTAIPVLGHYLVLGAWPLVMGF
HHHHHEEECCCCCHHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
TMWFQMKLNPQPPDPTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWNNTLSVAQQAFIMQR
HHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHC
NGVKVELWDNLRTSFAKKKKPT
CCCEEEEHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SDNRNTILAVVLSGLVLLGWQYFFNIPQMEKQRAAQQAQQQAAKQQAETQTPGAASPAA
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
APAAPGAPGSAPASPQQQAAAPTVSREAALAAGPRIKVETPRLSGSIALKGARIDDLALM
CCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHCCCEEEEECCCCCCCEEEECCCCCHHHHH
QYRETVDPKSPPIELFSPSGSARPYYAEFGWVGAAGASVKLPDHNTLWEQEGTGALTPAN
HHHHHCCCCCCCCEEECCCCCCCCEEEECCCEECCCCEEECCCCCCCCCCCCCCCCCCCC
PVTLKWDNGEGLTFRRQITVDDRYLFTVKDDVTNTGGAPVTLYPFALISRHGTPHVEGYY
CEEEEEECCCCEEEEEEEEECCEEEEEEECCCCCCCCCCEEEHHHHHHHCCCCCCCCEEE
ILHEGLIGYLGDQGLQEYSYSKIDEAKSVGFKATNGWLGITDKYWASALLPDTSAQLQAR
EEECCHHHHHCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHCCCCCHHHHHHH
FSANKVGNVTTYQTDYLEDARTVPIGGTVTANARLFAGAKEARVVGINFPFAGLGGYDRQ
HCCCCCCCEEEEEHHHHCCCCCCCCCCEEECCCEEEECCCCCEEEEEECCCCCCCCCCHH
LGLNHFDLLIDWGWFYFITKPMFLALDFFFHLVGNFGVAILLVTVLVKLLFLPLANKSYA
CCCCCEEHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
SMAKMKAIQPQLAALKERHPDDKVKQQQEMMEIYRKEKINPVAGCLPILLQIPVFFSLYK
HHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VLFVTIEMRHAPFFGWIHDLSAPDPTNIFNLFGLIPYDPTAIPVLGHYLVLGAWPLVMGF
HHHHHEEECCCCCHHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
TMWFQMKLNPQPPDPTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWNNTLSVAQQAFIMQR
HHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHC
NGVKVELWDNLRTSFAKKKKPT
CCCEEEEHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]