Click here to switch to the map view.

The map label for this gene is speF

Identifier: 191638641

GI number:

Start: 1811209

End: 1813299

Strand: Direct

Name: speF

Synonym: LCABL_18700

Alternate gene names: NA

Gene position: NA

Preceding gene: 191638638

Following gene: 191638644

Centisome position: NA

GC content: NA

Gene sequence:

>2091_bases
ATGCACTTATATATCGGCTACTCAGAAAAAGTAGCAGCAAGGATACTGCCCACCAATTGGCGTTGTTTAACTGCGGCACC
GTTAGCTGCCTTTGGCGCAGCAATCATCGATGCCTCTGACACTGCAACGCTCACTCAGCTTGTGGCCAGCCAATTACCCT
TACCAACTTTTATCATCGGCCAGATACCAATCAGTCACACTGGTCAGCTGACAGTCACCAACATCGATACACTTAATACC
GCAACGATGGCTCAGATTACTGCTGCTGCACAAGCTTATGAGCAAACCATGGTACCAGCATTCATTCGTGACTTACTGGA
CTATGCGAAGGCGGACCCAACCAGCTTTGCAACTCCTGGCCACCACAGCGGTCACTACGACGACTTAGCACCAGCAGGTT
ACTTACTTCATCAGGCTTACGGCCCATCTTTCTTCGCTAGCGATACCAGCGATGTCGTCACTTCTTTGGGCGATATGTTA
ACACATGGGGGCACCCCGCTAGCTGCCGAAGAAGCGACCGCGCAGTTATATCATGCCGATGAAACTTATTTTGTGACCAA
CGGCACGACTGGATCGAATAACATTGTGGCAAGTGCATTGCTCACGCCAGGCGATTTGGTTTTATTCGATCGGAATAACC
ACAAATCTTTTTATAACGCGGCACTCGTTCAAAATGATGCCCGCCCGGTTTATTTGGATACACTTCGAACGAAACGTGGG
TTGATTGGTCCGATCGATTTACAGAATCTAACCCATGAAAGTCTGCGACAAATGGCGGTAGCGGTGGCTCCCGAAAAGGC
ACATCAATCGCGGCCATTTCGACTGACAATTCTTGAACTAGAAACCTTTGATGGCATTGTGCCAAATGTCCGTCAGTTAA
TCGATCTTTTTGGGCCTTTAACCGACTACATTGTTTTCGATGCTGCCTGGGGTGGTTATGAGCCGTTTACTCCAGCAATG
ACGCCCATGGATCCCCTGCAGGTACCGCTTGGGCCGACTGACCCTGGTATCATCGTCACCCAAAGTGTCCACAAACAGCA
ATCCGGGTTTGGCCAGGCATCACAGATTCATAAAAAAGATGCCCATATTAAGGGACAAGCGCGATATGTCGGTCACGAAC
AGTTCAACCACGCGTACTTAAAACATGTTACGACCAGCTACAATTATCCGCTTTACGCGTCATTAGTCGCCAACACTGCC
ATTAATCAAGGCGCTCGCGGACAAAAAATCTGGCAAGATGCCGTTCGAGCAGCACTCGTCTTTCGCCGCTCGCTCAACGA
TTCGCGACTCTTTTCTGCTTACGAACCACCTGAGTTGACAACTTTGCCTGCTGATCAGGCCATTCAGACTGCTAGGGCTT
GGTCCATGACACCACAAGCTGCATGGCATCAACTCGCAGGCCTTCAACCTGATCAAGCATTTCTTGATCCAGGTAAAGTG
ACCGTGCTATTACCTGACACAGCCGCATTTGGCATCAGCGGTTGGTTAGTAGATCGTTATTTACTTGACCACGGCATTAT
TCCGGAAAAAGCCGACCTAAATAGCCTGCTTTTTTTAGTGACGCCGGGGGCCGCTCGAACAGACTGGCAACGATTGCGCC
AAGTGTTAGCCCAGTTTGAAGCCGATTATTTTGCAAATAAAACCGTTGCTGAAAGTTTGCCAAAATTAGTCGCTGAAACT
GACGAGGCGTATGCACATCAAACATTACGCGAGCTAGGTCAGACCATGTCGGACTTTTTCCGAGAAGCGCACCTAGCTGA
GCAACAACGTGACTTGTTTACCAACACCAACGCCATCCCCACTGCCATGACCCCGCAAGCCGCCGATCGTTATTTTGTTC
GCGGTCAAATTGACACCATCCCTCTGGAGCAAGCCACGGGCCGTATCGCAGTCGACGGCGCGCTGCCCTATCCGCCCGGA
ATCTTTGTGGTTGTCCCTGGCGAACGCTGGCGACCGGAAGCGATCAGTTACTTTCAAACACTTTTTGAAGGTATACGGCA
CTTCCCCGGCTTTACCCCAGAAATCCAAGGCGTTATCGCTCGTGCAGGTGGTCAGCCATATGTTCATGTTGTCCATGAAC
AACTTTCATAG

Upstream 100 bases:

>100_bases
AGAAGGCATCGAAGACACAGTCTTTGAAGTCACTCTAAAAATTTTCCGTTTAACATTATGTTAAAATCAACTGAATCTAT
TTTGAAAGGAACTCGCAGGC

Downstream 100 bases:

>100_bases
CCGTCAAAAAACGCGATCAATTAGCTTGATCGCGTTTTTTTTGCTTAGCCTATTCTAGTTATCAAAGAAAGTGGACTGCG
CGGCTCCCATGGTCGCCAAT

Product: ornithine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>696_residues
MHLYIGYSEKVAARILPTNWRCLTAAPLAAFGAAIIDASDTATLTQLVASQLPLPTFIIGQIPISHTGQLTVTNIDTLNT
ATMAQITAAAQAYEQTMVPAFIRDLLDYAKADPTSFATPGHHSGHYDDLAPAGYLLHQAYGPSFFASDTSDVVTSLGDML
THGGTPLAAEEATAQLYHADETYFVTNGTTGSNNIVASALLTPGDLVLFDRNNHKSFYNAALVQNDARPVYLDTLRTKRG
LIGPIDLQNLTHESLRQMAVAVAPEKAHQSRPFRLTILELETFDGIVPNVRQLIDLFGPLTDYIVFDAAWGGYEPFTPAM
TPMDPLQVPLGPTDPGIIVTQSVHKQQSGFGQASQIHKKDAHIKGQARYVGHEQFNHAYLKHVTTSYNYPLYASLVANTA
INQGARGQKIWQDAVRAALVFRRSLNDSRLFSAYEPPELTTLPADQAIQTARAWSMTPQAAWHQLAGLQPDQAFLDPGKV
TVLLPDTAAFGISGWLVDRYLLDHGIIPEKADLNSLLFLVTPGAARTDWQRLRQVLAQFEADYFANKTVAESLPKLVAET
DEAYAHQTLRELGQTMSDFFREAHLAEQQRDLFTNTNAIPTAMTPQAADRYFVRGQIDTIPLEQATGRIAVDGALPYPPG
IFVVVPGERWRPEAISYFQTLFEGIRHFPGFTPEIQGVIARAGGQPYVHVVHEQLS

Sequences:
NA

Specific function: NA

COG id: COG1982

COG function: function code E; Arginine/lysine/ornithine decarboxylases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA