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The map label for this gene is aspC [H]

Identifier: 190895064

GI number: 190895064

Start: 784807

End: 785970

Strand: Reverse

Name: aspC [H]

Synonym: RHECIAT_PC0000730

Alternate gene names: 190895064

Gene position: 785970-784807 (Counterclockwise)

Preceding gene: 190895065

Following gene: 190895059

Centisome position: 72.01

GC content: 61.08

Gene sequence:

>1164_bases
ATGCAATCCGCAATTCTCAATCGTTTCGTGGCGCGGCTTTCTCCGCCGCCTATTCCCTCGGTCTTTGCGTGGGCGCGCGA
CTATGCCGGTGCTTACGGGCCGCTGATCGACCTGTCGCAGGCCGTTCCCGGGTATCCTGCCCATCCCGAGATGCTGCGTC
TCCTCGGCGAAGCGGCGGCATCACAAGCCATGACGGGCTATGGGCCGATCGAGGGAGAAATGGTGCTGCGCGAAGTCTAT
GCGCGGCATATGAGCGACATCTACGGCGCGCCGATCCAGGCCGGCAATGTCCACATCACTTCCGGCTGCAATCAAGCCTT
CATGTGTGCCGCCATCGCCCTTGCTTGTGCCGGTGACGCGATCGCACTCACAAACCCCTTCTATTTCAATCACGAGACGA
CATTGTCCATGCTCGGCATCAATCGCATGCTTGTCGAGTGTGATGCGGCCAGCGGCTTCCTACCGGATGTTGCGTCGGCT
GAGCAGGCGCTTGCTGCCGGAGCGCGGGCGCTTGCGGTCGTCACGCCGAACAATCCGACCGGGGCCGTCTATCCGCCGTC
ACTGCTGCATGATCTTTTTGCGCTGTGCCGGAGATATGGCGCTTGGCTTGTGTTGGACGAGACCTATCGCGACTTTCTCC
AGGGCGATTACGGCCGGCCGCATGAGCTTCTGTTCGAGCCCGACTGGGAGGAGACGCTCGTTTTGCTTTACAGTTTCTCG
AAATCGTTCTGTATTCCCGGTCACAGGCTGGGGGCGGTGACGGCGGGGCCTAAGCTTTTGGGCGAGATCGCCAAGATCAT
GGACAATATGCAGATTTGCGCCCCGCGCTCCGCCCAGGTGGCGGTAGCTGCCGCCTTGCCGGTACTTGCCGATTGGCGCG
CAGGCAATCGGCTCGAAATCGCCCGCCGAGCGGAGGCGCTGAAGGCCGTTCTATCTGATATACCTGGTTGGGACATCGCC
GCGATCGGTGCCTATTTCGCGTTCGTGCGCCACCCCTTTGCCCACCAATCTTCTGTCGAGGTGGCCGAGAGGCTGGCAAA
GCAGGTGGGTATCGTCAGTATCCCCGGAAGCTATTTCGGCGTGGGACAAGAACGCTATTTGCGGCTTGCCTTCGCCAATG
CCGACGCGGCGTCCATTGGGCTCCTGTCCAATCGCCTTCGTTGA

Upstream 100 bases:

>100_bases
GGATGCGGGAACACGGTGGGAGGAGCAATATGGTCTGACAAAGAAGTTGAGATTGCTCTCGATATCGGTGTAGCAATCGG
TCTCCAAGGAACCCATCGTC

Downstream 100 bases:

>100_bases
AACAAAGCTAATTGGTATGAACGAGATCAGCCGCTGCGCCGAGCCTACGATAGCCACCGTTCCAGTATAAAAGCGGGCTG
GTATGGGGTCGCACGGCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MQSAILNRFVARLSPPPIPSVFAWARDYAGAYGPLIDLSQAVPGYPAHPEMLRLLGEAAASQAMTGYGPIEGEMVLREVY
ARHMSDIYGAPIQAGNVHITSGCNQAFMCAAIALACAGDAIALTNPFYFNHETTLSMLGINRMLVECDAASGFLPDVASA
EQALAAGARALAVVTPNNPTGAVYPPSLLHDLFALCRRYGAWLVLDETYRDFLQGDYGRPHELLFEPDWEETLVLLYSFS
KSFCIPGHRLGAVTAGPKLLGEIAKIMDNMQICAPRSAQVAVAAALPVLADWRAGNRLEIARRAEALKAVLSDIPGWDIA
AIGAYFAFVRHPFAHQSSVEVAERLAKQVGIVSIPGSYFGVGQERYLRLAFANADAASIGLLSNRLR

Sequences:

>Translated_387_residues
MQSAILNRFVARLSPPPIPSVFAWARDYAGAYGPLIDLSQAVPGYPAHPEMLRLLGEAAASQAMTGYGPIEGEMVLREVY
ARHMSDIYGAPIQAGNVHITSGCNQAFMCAAIALACAGDAIALTNPFYFNHETTLSMLGINRMLVECDAASGFLPDVASA
EQALAAGARALAVVTPNNPTGAVYPPSLLHDLFALCRRYGAWLVLDETYRDFLQGDYGRPHELLFEPDWEETLVLLYSFS
KSFCIPGHRLGAVTAGPKLLGEIAKIMDNMQICAPRSAQVAVAAALPVLADWRAGNRLEIARRAEALKAVLSDIPGWDIA
AIGAYFAFVRHPFAHQSSVEVAERLAKQVGIVSIPGSYFGVGQERYLRLAFANADAASIGLLSNRLR
>Mature_387_residues
MQSAILNRFVARLSPPPIPSVFAWARDYAGAYGPLIDLSQAVPGYPAHPEMLRLLGEAAASQAMTGYGPIEGEMVLREVY
ARHMSDIYGAPIQAGNVHITSGCNQAFMCAAIALACAGDAIALTNPFYFNHETTLSMLGINRMLVECDAASGFLPDVASA
EQALAAGARALAVVTPNNPTGAVYPPSLLHDLFALCRRYGAWLVLDETYRDFLQGDYGRPHELLFEPDWEETLVLLYSFS
KSFCIPGHRLGAVTAGPKLLGEIAKIMDNMQICAPRSAQVAVAAALPVLADWRAGNRLEIARRAEALKAVLSDIPGWDIA
AIGAYFAFVRHPFAHQSSVEVAERLAKQVGIVSIPGSYFGVGQERYLRLAFANADAASIGLLSNRLR

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI4507369, Length=328, Percent_Identity=24.6951219512195, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI95147551, Length=264, Percent_Identity=23.4848484848485, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI169881279, Length=264, Percent_Identity=23.4848484848485, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI1790797, Length=269, Percent_Identity=28.6245353159851, Blast_Score=81, Evalue=9e-17,
Organism=Escherichia coli, GI1786816, Length=358, Percent_Identity=23.463687150838, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788627, Length=252, Percent_Identity=26.984126984127, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1788722, Length=341, Percent_Identity=23.1671554252199, Blast_Score=75, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17567663, Length=321, Percent_Identity=23.6760124610592, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71994476, Length=277, Percent_Identity=23.4657039711191, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71994472, Length=277, Percent_Identity=23.4657039711191, Blast_Score=65, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6322401, Length=375, Percent_Identity=22.4, Blast_Score=84, Evalue=5e-17,
Organism=Drosophila melanogaster, GI18859735, Length=223, Percent_Identity=24.6636771300448, Blast_Score=65, Evalue=9e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 41663; Mature: 41663

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSAILNRFVARLSPPPIPSVFAWARDYAGAYGPLIDLSQAVPGYPAHPEMLRLLGEAAA
CCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHH
SQAMTGYGPIEGEMVLREVYARHMSDIYGAPIQAGNVHITSGCNQAFMCAAIALACAGDA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCE
IALTNPFYFNHETTLSMLGINRMLVECDAASGFLPDVASAEQALAAGARALAVVTPNNPT
EEECCCEEECCCCHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCC
GAVYPPSLLHDLFALCRRYGAWLVLDETYRDFLQGDYGRPHELLFEPDWEETLVLLYSFS
CCCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHCC
KSFCIPGHRLGAVTAGPKLLGEIAKIMDNMQICAPRSAQVAVAAALPVLADWRAGNRLEI
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHH
ARRAEALKAVLSDIPGWDIAAIGAYFAFVRHPFAHQSSVEVAERLAKQVGIVSIPGSYFG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEECCCHHHC
VGQERYLRLAFANADAASIGLLSNRLR
CCHHHEEEEEEECCCHHHHHHHHHCCC
>Mature Secondary Structure
MQSAILNRFVARLSPPPIPSVFAWARDYAGAYGPLIDLSQAVPGYPAHPEMLRLLGEAAA
CCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHH
SQAMTGYGPIEGEMVLREVYARHMSDIYGAPIQAGNVHITSGCNQAFMCAAIALACAGDA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCE
IALTNPFYFNHETTLSMLGINRMLVECDAASGFLPDVASAEQALAAGARALAVVTPNNPT
EEECCCEEECCCCHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCC
GAVYPPSLLHDLFALCRRYGAWLVLDETYRDFLQGDYGRPHELLFEPDWEETLVLLYSFS
CCCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHCC
KSFCIPGHRLGAVTAGPKLLGEIAKIMDNMQICAPRSAQVAVAAALPVLADWRAGNRLEI
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHH
ARRAEALKAVLSDIPGWDIAAIGAYFAFVRHPFAHQSSVEVAERLAKQVGIVSIPGSYFG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEECCCHHHC
VGQERYLRLAFANADAASIGLLSNRLR
CCHHHEEEEEEECCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11572479 [H]