Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
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Accession | NC_010997 |
Length | 1,091,523 |
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The map label for this gene is fhuA [H]
Identifier: 190895028
GI number: 190895028
Start: 751859
End: 754033
Strand: Reverse
Name: fhuA [H]
Synonym: RHECIAT_PC0000694
Alternate gene names: 190895028
Gene position: 754033-751859 (Counterclockwise)
Preceding gene: 190895031
Following gene: 190895027
Centisome position: 69.08
GC content: 59.49
Gene sequence:
>2175_bases ATGCCGCATGTTTTTTTGAATGTTTCTAAGAATCTACCAAAAATCTATAGAGATAGCCTCGCGGCTACGACAGCGATCCT GCTGATCGGTATTTCAGCATCGCCGGCTTCCGCTCAGAGCGCCACCGACGGCGACACGGCGACGACCCTGGAACCGATCG TCATTCAAGGTGCATCCTCTGATAGCAAGACCGACAGGACGTCGGTTACCGCCAAAAACAGCGCGGGGGCGACCAAGATC AGCACGCCGCTGGTCGAGACGCCGCGTTCGATATCGGTCACCACCGAGAAGGAAATCGAGCAGCGCGGCGCGCAAAGCAT CATCGAGGCGGTGCGTTATACCTCAGGCGTGACGACAGGGCCGAACGGCTTCGATCCGCGTTTCGACCAGATCTACATTC GCGGCTTCAACATCACGACAGTCGGAGACTTTCGTGACAGCCTGCGTCAGCCCTACATGAATTACGGCATGTTCCGCACC GATCCCTATCAGCTGCAGCGCGTCGAGGTGATCAAGGGACCGGTTTCCGTTCTCTACGGTGCGGGATCGCCGGGCGGCCT CGTCAACAAGATATCGAAGCTTCCAACCGAGGAACCGATCCGTGAGGTGGGCATTACCTACGGCACCAAGGACCGGCTGC AGGGGATGTTCGATTTCGGCGGGCCGATCAGCGAAGGCAACGACGATTTCCTCTATCGGATCGTCGGTCTCGCCCGTCGC GGCGACACCAATTTCGATATTGCCGACGACCGCTATTTCCTGGCGCCGTCCTTCACCTGGAAGCCCGACGAGGGCACGAC GTTCACGGTGTACGGTCTGGCGCAGTCTGACGAGACCGACTCCAACGTCGGCGCGATCACGACCTTGGACGGGAAGATCC ACGAGCTCAGGGAGAGCGATCCCGACTACGACTACCAGAAGGTCAAGCAGCAGCAGGTCGGCTATCAGTTCGAGCATGAA TTCGACAACGGCCTGACCTTCCGGCAGAACCTGCGTTATTCGCATCTCGACCTGCAGGCCCGCTATCTCGGTGTGACCGG CTGGACCGGGACCGTCGCGCATCGCGGCACGAATGCGATCCGCGACGAAATGAATGTCTTCCAGGTCGACAATCAGCTCG AGGCGAAGTTTGACACGGGTCCGTTGGCCCATACGATGCTGTTCGGGCTCGATTACACCAATCTCCAGTCAAGCTTTGGC TACGGCGCCGGCGCGTCCGATCCGGCGTTCGACTTCGATATCGCCAATCCGACCTATGGTGTCTCGGGCGCCACGCCGGA CTATAGTATCCTGGCTTCCGATGCCGACATGCGGCAGGTCGGCATTTATGCGATGGACCAGATCGAGGTCGGGAATTGGC GGTTCAACCTCGGCGGCCGGCAGACCTGGGTGAACCAGACGCGCGATGCGACTTTGCCCGCGGTCAGCTCGGAGGAGGTC GATAAGAACGCCTTCTCCTGGCAAGCCGGTGCCCTCTATCTCTTCGACAACGGCATTGCTCCCTTCGTCTCCTACGCCAC CTCGTTCGATCCGGTGACCAACCGTTCGACCTCAGGCAAGATCCTGGCGCCGACAGAGGGTGAACAGTACGAGGTCGGCG TGAAATACCAGCCGCCGGGCTCCGACATCCTGCTGTCGGCCGTTGCCTATCACATCGTTGAAAAGAACAAGCCGGTGCTG GTCGATCCGCTGTTGTTTGCCTATGGATCGATCGGTGAGGTGACCGGGAAGGGTATCGAACTCGAAGCCCGCGCGGCGGT AGCCGATGGTTGGGATCTTATTGCGGCCTACACCTACAACCAGTCAGAAGTGACGGGAGGCGGTGAAAACGAGGGCAATA CGCCAGCCCTGACACCCTCGCATGTCGCCAGCCTCTGGGCCAACTATACGTTCCAGGAAACCAACCCCTTCCATGGCCTG TCTGTCGGCACGGGTGTCCGTTATGTCAGCGAGAACTGGACGGATACGGCCAATACGTCGAAGAACCCCTCGAGCTTCTA CATCGACGCGTCCGCCGCTTATGACTTCGGCGCGGTCGACAAGAAATACGAAGGCCTGACAGCGGCCTTCAATATCCGCA ACATTGCCGATGAGCGCGACACCGTCTGCAACGAGGGCTTCTGCTACCTCGGCCAGGGCCGCAACATGACGGCAACCCTG AAGTATCGGTGGTAA
Upstream 100 bases:
>100_bases AAATTATCGATTAAAAGATGACAAAAAAAATCATCTTATGTTGACAAGGCCCATTGCGCTCCATAGGTTCCGCCCGCATC CGTGACGCAGGGACAGAGCA
Downstream 100 bases:
>100_bases CGGCATGGCGGCAGAGATGAACGGGGCGGCCTCACGCCCTTCGATTGCCGATCATCCTGTCGCCCGACAGGCCGTCGACC TCGACGGCCTGGTGGGCGAT
Product: ferrichrome-iron transporter, receptor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 724; Mature: 723
Protein sequence:
>724_residues MPHVFLNVSKNLPKIYRDSLAATTAILLIGISASPASAQSATDGDTATTLEPIVIQGASSDSKTDRTSVTAKNSAGATKI STPLVETPRSISVTTEKEIEQRGAQSIIEAVRYTSGVTTGPNGFDPRFDQIYIRGFNITTVGDFRDSLRQPYMNYGMFRT DPYQLQRVEVIKGPVSVLYGAGSPGGLVNKISKLPTEEPIREVGITYGTKDRLQGMFDFGGPISEGNDDFLYRIVGLARR GDTNFDIADDRYFLAPSFTWKPDEGTTFTVYGLAQSDETDSNVGAITTLDGKIHELRESDPDYDYQKVKQQQVGYQFEHE FDNGLTFRQNLRYSHLDLQARYLGVTGWTGTVAHRGTNAIRDEMNVFQVDNQLEAKFDTGPLAHTMLFGLDYTNLQSSFG YGAGASDPAFDFDIANPTYGVSGATPDYSILASDADMRQVGIYAMDQIEVGNWRFNLGGRQTWVNQTRDATLPAVSSEEV DKNAFSWQAGALYLFDNGIAPFVSYATSFDPVTNRSTSGKILAPTEGEQYEVGVKYQPPGSDILLSAVAYHIVEKNKPVL VDPLLFAYGSIGEVTGKGIELEARAAVADGWDLIAAYTYNQSEVTGGGENEGNTPALTPSHVASLWANYTFQETNPFHGL SVGTGVRYVSENWTDTANTSKNPSSFYIDASAAYDFGAVDKKYEGLTAAFNIRNIADERDTVCNEGFCYLGQGRNMTATL KYRW
Sequences:
>Translated_724_residues MPHVFLNVSKNLPKIYRDSLAATTAILLIGISASPASAQSATDGDTATTLEPIVIQGASSDSKTDRTSVTAKNSAGATKI STPLVETPRSISVTTEKEIEQRGAQSIIEAVRYTSGVTTGPNGFDPRFDQIYIRGFNITTVGDFRDSLRQPYMNYGMFRT DPYQLQRVEVIKGPVSVLYGAGSPGGLVNKISKLPTEEPIREVGITYGTKDRLQGMFDFGGPISEGNDDFLYRIVGLARR GDTNFDIADDRYFLAPSFTWKPDEGTTFTVYGLAQSDETDSNVGAITTLDGKIHELRESDPDYDYQKVKQQQVGYQFEHE FDNGLTFRQNLRYSHLDLQARYLGVTGWTGTVAHRGTNAIRDEMNVFQVDNQLEAKFDTGPLAHTMLFGLDYTNLQSSFG YGAGASDPAFDFDIANPTYGVSGATPDYSILASDADMRQVGIYAMDQIEVGNWRFNLGGRQTWVNQTRDATLPAVSSEEV DKNAFSWQAGALYLFDNGIAPFVSYATSFDPVTNRSTSGKILAPTEGEQYEVGVKYQPPGSDILLSAVAYHIVEKNKPVL VDPLLFAYGSIGEVTGKGIELEARAAVADGWDLIAAYTYNQSEVTGGGENEGNTPALTPSHVASLWANYTFQETNPFHGL SVGTGVRYVSENWTDTANTSKNPSSFYIDASAAYDFGAVDKKYEGLTAAFNIRNIADERDTVCNEGFCYLGQGRNMTATL KYRW >Mature_723_residues PHVFLNVSKNLPKIYRDSLAATTAILLIGISASPASAQSATDGDTATTLEPIVIQGASSDSKTDRTSVTAKNSAGATKIS TPLVETPRSISVTTEKEIEQRGAQSIIEAVRYTSGVTTGPNGFDPRFDQIYIRGFNITTVGDFRDSLRQPYMNYGMFRTD PYQLQRVEVIKGPVSVLYGAGSPGGLVNKISKLPTEEPIREVGITYGTKDRLQGMFDFGGPISEGNDDFLYRIVGLARRG DTNFDIADDRYFLAPSFTWKPDEGTTFTVYGLAQSDETDSNVGAITTLDGKIHELRESDPDYDYQKVKQQQVGYQFEHEF DNGLTFRQNLRYSHLDLQARYLGVTGWTGTVAHRGTNAIRDEMNVFQVDNQLEAKFDTGPLAHTMLFGLDYTNLQSSFGY GAGASDPAFDFDIANPTYGVSGATPDYSILASDADMRQVGIYAMDQIEVGNWRFNLGGRQTWVNQTRDATLPAVSSEEVD KNAFSWQAGALYLFDNGIAPFVSYATSFDPVTNRSTSGKILAPTEGEQYEVGVKYQPPGSDILLSAVAYHIVEKNKPVLV DPLLFAYGSIGEVTGKGIELEARAAVADGWDLIAAYTYNQSEVTGGGENEGNTPALTPSHVASLWANYTFQETNPFHGLS VGTGVRYVSENWTDTANTSKNPSSFYIDASAAYDFGAVDKKYEGLTAAFNIRNIADERDTVCNEGFCYLGQGRNMTATLK YRW
Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=760, Percent_Identity=32.5, Blast_Score=354, Evalue=1e-98, Organism=Escherichia coli, GI1787344, Length=761, Percent_Identity=22.4704336399474, Blast_Score=115, Evalue=7e-27, Organism=Escherichia coli, GI1787024, Length=697, Percent_Identity=23.3859397417504, Blast_Score=109, Evalue=6e-25, Organism=Escherichia coli, GI1790743, Length=692, Percent_Identity=22.1098265895954, Blast_Score=67, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 79212; Mature: 79081
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHVFLNVSKNLPKIYRDSLAATTAILLIGISASPASAQSATDGDTATTLEPIVIQGASS CCEEEEECCCCCHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCEECEEEEECCCC DSKTDRTSVTAKNSAGATKISTPLVETPRSISVTTEKEIEQRGAQSIIEAVRYTSGVTTG CCCCCCCEEEECCCCCCCEECCCHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCC PNGFDPRFDQIYIRGFNITTVGDFRDSLRQPYMNYGMFRTDPYQLQRVEVIKGPVSVLYG CCCCCCCCCEEEEEEEEEEEEHHHHHHHHCHHHHCCCEECCHHHEEEEEEECCCEEEEEE AGSPGGLVNKISKLPTEEPIREVGITYGTKDRLQGMFDFGGPISEGNDDFLYRIVGLARR CCCCCHHHHHHHHCCCHHHHHHHCCCCCCHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHC GDTNFDIADDRYFLAPSFTWKPDEGTTFTVYGLAQSDETDSNVGAITTLDGKIHELRESD CCCCCEECCCCEEECCCCEECCCCCCEEEEEEEECCCCCCCCCCEEEEECCHHHHHHCCC PDYDYQKVKQQQVGYQFEHEFDNGLTFRQNLRYSHLDLQARYLGVTGWTGTVAHRGTNAI CCCHHHHHHHHHCCCEEEECCCCCCEEHHCCCEEEEEEEEEEEEEECCCCCHHHCCCHHH RDEMNVFQVDNQLEAKFDTGPLAHTMLFGLDYTNLQSSFGYGAGASDPAFDFDIANPTYG HHCCCEEEECCCEEEECCCCCHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEEECCCCCCC VSGATPDYSILASDADMRQVGIYAMDQIEVGNWRFNLGGRQTWVNQTRDATLPAVSSEEV CCCCCCCCEEEECCCCCHHCCEEEEEEEEECCEEEECCCCHHHHCCCCCCCCCCCCCHHC DKNAFSWQAGALYLFDNGIAPFVSYATSFDPVTNRSTSGKILAPTEGEQYEVGVKYQPPG CCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCC SDILLSAVAYHIVEKNKPVLVDPLLFAYGSIGEVTGKGIELEARAAVADGWDLIAAYTYN CHHHHHHHHHHHHHCCCCEEECHHHHHCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEC QSEVTGGGENEGNTPALTPSHVASLWANYTFQETNPFHGLSVGTGVRYVSENWTDTANTS CCEECCCCCCCCCCCCCCHHHHHHHHHCCEEECCCCCCCCCCCCCEEEECCCCCCCCCCC KNPSSFYIDASAAYDFGAVDKKYEGLTAAFNIRNIADERDTVCNEGFCYLGQGRNMTATL CCCCEEEEECCCCCCCCCCCCCCCCEEEEEEHHHHCCHHHHHHCCCCEEEECCCCEEEEE KYRW EECC >Mature Secondary Structure PHVFLNVSKNLPKIYRDSLAATTAILLIGISASPASAQSATDGDTATTLEPIVIQGASS CEEEEECCCCCHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCEECEEEEECCCC DSKTDRTSVTAKNSAGATKISTPLVETPRSISVTTEKEIEQRGAQSIIEAVRYTSGVTTG CCCCCCCEEEECCCCCCCEECCCHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCC PNGFDPRFDQIYIRGFNITTVGDFRDSLRQPYMNYGMFRTDPYQLQRVEVIKGPVSVLYG CCCCCCCCCEEEEEEEEEEEEHHHHHHHHCHHHHCCCEECCHHHEEEEEEECCCEEEEEE AGSPGGLVNKISKLPTEEPIREVGITYGTKDRLQGMFDFGGPISEGNDDFLYRIVGLARR CCCCCHHHHHHHHCCCHHHHHHHCCCCCCHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHC GDTNFDIADDRYFLAPSFTWKPDEGTTFTVYGLAQSDETDSNVGAITTLDGKIHELRESD CCCCCEECCCCEEECCCCEECCCCCCEEEEEEEECCCCCCCCCCEEEEECCHHHHHHCCC PDYDYQKVKQQQVGYQFEHEFDNGLTFRQNLRYSHLDLQARYLGVTGWTGTVAHRGTNAI CCCHHHHHHHHHCCCEEEECCCCCCEEHHCCCEEEEEEEEEEEEEECCCCCHHHCCCHHH RDEMNVFQVDNQLEAKFDTGPLAHTMLFGLDYTNLQSSFGYGAGASDPAFDFDIANPTYG HHCCCEEEECCCEEEECCCCCHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEEECCCCCCC VSGATPDYSILASDADMRQVGIYAMDQIEVGNWRFNLGGRQTWVNQTRDATLPAVSSEEV CCCCCCCCEEEECCCCCHHCCEEEEEEEEECCEEEECCCCHHHHCCCCCCCCCCCCCHHC DKNAFSWQAGALYLFDNGIAPFVSYATSFDPVTNRSTSGKILAPTEGEQYEVGVKYQPPG CCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCC SDILLSAVAYHIVEKNKPVLVDPLLFAYGSIGEVTGKGIELEARAAVADGWDLIAAYTYN CHHHHHHHHHHHHHCCCCEEECHHHHHCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEC QSEVTGGGENEGNTPALTPSHVASLWANYTFQETNPFHGLSVGTGVRYVSENWTDTANTS CCEECCCCCCCCCCCCCCHHHHHHHHHCCEEECCCCCCCCCCCCCEEEECCCCCCCCCCC KNPSSFYIDASAAYDFGAVDKKYEGLTAAFNIRNIADERDTVCNEGFCYLGQGRNMTATL CCCCEEEEECCCCCCCCCCCCCCCCEEEEEEHHHHCCHHHHHHCCCCEEEECCCCEEEEE KYRW EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8576065 [H]