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The map label for this gene is 190894978

Identifier: 190894978

GI number: 190894978

Start: 696619

End: 697656

Strand: Reverse

Name: 190894978

Synonym: RHECIAT_PC0000644

Alternate gene names: NA

Gene position: 697656-696619 (Counterclockwise)

Preceding gene: 190894979

Following gene: 190894977

Centisome position: 63.92

GC content: 66.38

Gene sequence:

>1038_bases
ATGAACTGGGAGCGCAGCCTCGACCTGCTGCAAGTCCACTGCCAGGGCGAGATCGGCAAGGTCATCGTCGCAGGCGCGCC
CGAAATACCGGGCGCGACCATGCTCGACAAGATGAACCACATCAACACCGTCGACGACAGCCTGCGCCGCTTCGTCACCT
TCGAGCCGCGCGCCAACGTCGCCATGTCGGTGAACCTGCTGGTCGAGCCGACCCGCGCCGACGCCGATGCCGGCTTCATC
GTGCTGCAGGCCGACCGCGCCCACCCGATGTCCGGCAGCAATTGCATCTGCGTCGTCACCGCACTGCTCGAAAGGGGCCG
GGTGCCGATGTCGGAGCCGGAGACGGTGGTGCGGCTGGACACGCCGGCTGGCCTGATCGTCGCGCGCGCCACCTGCCGCG
ACGGCCGCTGCCTGTCGGTCAGCCTCGACAATGTGCCGAGTTTTGCCGAAGCGCTCGACAGTGAGGTGGAGACGCCGAAA
TGGGGCCGCATCAAGGTCGATGTCGCCTTCGGCGGCGTCTATTACGCGCTGGTCGATTTCGATCAGCTCGGCCTCGATAT
CGCTCCGGCCAATGCCCGGCTGCTGGCGGAGGCCGGCATCGAGCTCAAGTCGCTTCTTCCCGGGCAGATCTCGGTCGCCC
ATCCCGTTTTAACCGGCGTCAACGAGATCGCCTATGTGATGTTCCGTGGGCGGGAGGCTGACGGTGCAATCAGGACCTGC
ACGACGCTGCAGCCCGGCCGCGTCGACCGCTCGCCCTGCGGAACCGGAAGCTCGGCCAACCTGGCGACGCTCTATGCCCG
TGGCGAAGTCTCGGTAGGAGACCGCAGAATGTCGCGATCGATCATCGGCGGCGAGTTTCTGGCGGAGGCGATCGGCGAAA
CCGAGGTGGGCGGCCGCCGCGCCGTGTTGCCAAGAATAACCGGCCGCGCCTATGTCTATGGCCGCGAGCAGCTTCGTATG
TCCGACGACGATCCCTTCGCCGCGGGCTTTGCGCTTTCTGATACATGGGGGCCGCAGGTCGTCGGCCTGCTCGGATAG

Upstream 100 bases:

>100_bases
TCGGCCGCTGGGGCCTCGACAACTATCTCGAGACCAAGCAGATCACCCGCTTCGTCAGCGAGGATCCCTGGGGCTGGTAC
ATCAAGCCGGAGGCGGCCGA

Downstream 100 bases:

>100_bases
GAGCCTGCAATGTCTCAGCTTCAACCTCTGACCGGCCAGACTGTCCTCGTCACCGGGGCATCCGGCGGAATCGGCGCAGC
CATCGTCGAGCGTCTTTCGG

Product: putative proline racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MNWERSLDLLQVHCQGEIGKVIVAGAPEIPGATMLDKMNHINTVDDSLRRFVTFEPRANVAMSVNLLVEPTRADADAGFI
VLQADRAHPMSGSNCICVVTALLERGRVPMSEPETVVRLDTPAGLIVARATCRDGRCLSVSLDNVPSFAEALDSEVETPK
WGRIKVDVAFGGVYYALVDFDQLGLDIAPANARLLAEAGIELKSLLPGQISVAHPVLTGVNEIAYVMFRGREADGAIRTC
TTLQPGRVDRSPCGTGSSANLATLYARGEVSVGDRRMSRSIIGGEFLAEAIGETEVGGRRAVLPRITGRAYVYGREQLRM
SDDDPFAAGFALSDTWGPQVVGLLG

Sequences:

>Translated_345_residues
MNWERSLDLLQVHCQGEIGKVIVAGAPEIPGATMLDKMNHINTVDDSLRRFVTFEPRANVAMSVNLLVEPTRADADAGFI
VLQADRAHPMSGSNCICVVTALLERGRVPMSEPETVVRLDTPAGLIVARATCRDGRCLSVSLDNVPSFAEALDSEVETPK
WGRIKVDVAFGGVYYALVDFDQLGLDIAPANARLLAEAGIELKSLLPGQISVAHPVLTGVNEIAYVMFRGREADGAIRTC
TTLQPGRVDRSPCGTGSSANLATLYARGEVSVGDRRMSRSIIGGEFLAEAIGETEVGGRRAVLPRITGRAYVYGREQLRM
SDDDPFAAGFALSDTWGPQVVGLLG
>Mature_345_residues
MNWERSLDLLQVHCQGEIGKVIVAGAPEIPGATMLDKMNHINTVDDSLRRFVTFEPRANVAMSVNLLVEPTRADADAGFI
VLQADRAHPMSGSNCICVVTALLERGRVPMSEPETVVRLDTPAGLIVARATCRDGRCLSVSLDNVPSFAEALDSEVETPK
WGRIKVDVAFGGVYYALVDFDQLGLDIAPANARLLAEAGIELKSLLPGQISVAHPVLTGVNEIAYVMFRGREADGAIRTC
TTLQPGRVDRSPCGTGSSANLATLYARGEVSVGDRRMSRSIIGGEFLAEAIGETEVGGRRAVLPRITGRAYVYGREQLRM
SDDDPFAAGFALSDTWGPQVVGLLG

Specific function: Unknown

COG id: COG3938

COG function: function code E; Proline racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proline racemase family [H]

Homologues:

Organism=Homo sapiens, GI21389361, Length=339, Percent_Identity=30.9734513274336, Blast_Score=158, Evalue=8e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008794 [H]

Pfam domain/function: PF05544 Pro_racemase [H]

EC number: NA

Molecular weight: Translated: 36967; Mature: 36967

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWERSLDLLQVHCQGEIGKVIVAGAPEIPGATMLDKMNHINTVDDSLRRFVTFEPRANV
CCCCCCCEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHEEEECCCCCE
AMSVNLLVEPTRADADAGFIVLQADRAHPMSGSNCICVVTALLERGRVPMSEPETVVRLD
EEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEE
TPAGLIVARATCRDGRCLSVSLDNVPSFAEALDSEVETPKWGRIKVDVAFGGVYYALVDF
CCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEEH
DQLGLDIAPANARLLAEAGIELKSLLPGQISVAHPVLTGVNEIAYVMFRGREADGAIRTC
HHHCCEECCCCCEEEECCCCHHHHCCCCCEEEHHHHHHHHHHEEEEEEECCCCCCCEEEE
TTLQPGRVDRSPCGTGSSANLATLYARGEVSVGDRRMSRSIIGGEFLAEAIGETEVGGRR
ECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCE
AVLPRITGRAYVYGREQLRMSDDDPFAAGFALSDTWGPQVVGLLG
EECEEECCCEEEEEHHHEECCCCCCCEECEEECCCCCCEEEEECC
>Mature Secondary Structure
MNWERSLDLLQVHCQGEIGKVIVAGAPEIPGATMLDKMNHINTVDDSLRRFVTFEPRANV
CCCCCCCEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHEEEECCCCCE
AMSVNLLVEPTRADADAGFIVLQADRAHPMSGSNCICVVTALLERGRVPMSEPETVVRLD
EEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEE
TPAGLIVARATCRDGRCLSVSLDNVPSFAEALDSEVETPKWGRIKVDVAFGGVYYALVDF
CCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEEH
DQLGLDIAPANARLLAEAGIELKSLLPGQISVAHPVLTGVNEIAYVMFRGREADGAIRTC
HHHCCEECCCCCEEEECCCCHHHHCCCCCEEEHHHHHHHHHHEEEEEEECCCCCCCEEEE
TTLQPGRVDRSPCGTGSSANLATLYARGEVSVGDRRMSRSIIGGEFLAEAIGETEVGGRR
ECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCE
AVLPRITGRAYVYGREQLRMSDDDPFAAGFALSDTWGPQVVGLLG
EECEEECCCEEEEEHHHEECCCCCCCEECEEECCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]