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The map label for this gene is 190571712

Identifier: 190571712

GI number: 190571712

Start: 1414493

End: 1415413

Strand: Direct

Name: 190571712

Synonym: WPa_1340

Alternate gene names: NA

Gene position: 1414493-1415413 (Clockwise)

Preceding gene: 190571710

Following gene: 190571716

Centisome position: 95.42

GC content: 35.5

Gene sequence:

>921_bases
ATGGCAAAATACATCCTTTCAGTTGACGGCGGAGGCATAAGAGGCATCATACCAGCCATAATATTAGCAGAAATAGAAAA
AAGAACAAGAAGAACTATAGCTGAAATCTTTGATTTAATGGCAGGAACCTCAACCGGTGGGATTATTGTTGCTGGACTTT
GTAAAAGCAATAAACTTCAATACTCTGCCAATGATTTGGTTGAACTTTATCAAGAGTATGGAGCATATATCTTTCAATCA
TCATTTTGGAGAAAATCAATTGCTTCTTGGCTGAGTGGTTCTCAGTACTCATATAGAAATATGGAATTTATTCTCAACAA
ATACTTTGGTGAAAGTACTATGGCCGATGTTGCGAGTAATCTACTACTCACCAGTTATGACATTCACAATAGTTGTGAAT
TTTTCTTCAAAAGTTGGAAAGAAAAAAACATTAAGTTGAAAGATGCACTCAGAGCTACAACAGCTGCTCCAACGTACTTC
ACACCAAAACGTCTAAAAATTAGCCAAACAGAGAGAGTGTTGATAGATGGCGGAGTGTTTGCTAATAATCCAGCGGCTTG
TGCATATGCAAGTGCTAAGAGGTTATTTCCAAATGATGAGATTATACTGCTATCAATAGGCACTGGTAGAACAGATAGAA
GTATAAAGTATGCTAACTCAAGGAAATTTGGCAAAATAGGGTGGGTCAAGCCACTACTGAATGTGATGTTTGCCTCTGGA
TTGGATTGCGTTGATTATCAACTAGAACAAGTAATAGACGATAAATATATACGTATACAATCGCAACTAAAAATAGCATC
ACCTGACATGGATAATATTACATCAAAAAATATCAAATCTCTTCAGCAAGAGGCAAAGGCAATGATAGAGGACAATCAGA
AAGTGATAGAAAAATTCTGTATAGATATATTAAATATATAA

Upstream 100 bases:

>100_bases
GGTGCAATTTTCTCCAGGCGTGAAGCAGACTGTGGCTTTTGGGCAGGAAACACATCCCGATAAAAGCGAACAAGTTAATA
AAATCAATAAATACCTAACC

Downstream 100 bases:

>100_bases
CTATTCTCTCTAATATTTTAATATATTATTTATGAGTCAGTAAACTACTGCTGTTTTTAACCCAGATTAAGTTTTGAAAG
CATAATTTTCAAGCTCCTCA

Product: patatin family protein

Products: NA

Alternate protein names: Patatin Family Protein; Patatin-Like Phospholipase; Patatin-Like Protein; Phospholipase Patatin Family; Patatin-Related Protein; Patatin-Like Phospholipase Family

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MAKYILSVDGGGIRGIIPAIILAEIEKRTRRTIAEIFDLMAGTSTGGIIVAGLCKSNKLQYSANDLVELYQEYGAYIFQS
SFWRKSIASWLSGSQYSYRNMEFILNKYFGESTMADVASNLLLTSYDIHNSCEFFFKSWKEKNIKLKDALRATTAAPTYF
TPKRLKISQTERVLIDGGVFANNPAACAYASAKRLFPNDEIILLSIGTGRTDRSIKYANSRKFGKIGWVKPLLNVMFASG
LDCVDYQLEQVIDDKYIRIQSQLKIASPDMDNITSKNIKSLQQEAKAMIEDNQKVIEKFCIDILNI

Sequences:

>Translated_306_residues
MAKYILSVDGGGIRGIIPAIILAEIEKRTRRTIAEIFDLMAGTSTGGIIVAGLCKSNKLQYSANDLVELYQEYGAYIFQS
SFWRKSIASWLSGSQYSYRNMEFILNKYFGESTMADVASNLLLTSYDIHNSCEFFFKSWKEKNIKLKDALRATTAAPTYF
TPKRLKISQTERVLIDGGVFANNPAACAYASAKRLFPNDEIILLSIGTGRTDRSIKYANSRKFGKIGWVKPLLNVMFASG
LDCVDYQLEQVIDDKYIRIQSQLKIASPDMDNITSKNIKSLQQEAKAMIEDNQKVIEKFCIDILNI
>Mature_305_residues
AKYILSVDGGGIRGIIPAIILAEIEKRTRRTIAEIFDLMAGTSTGGIIVAGLCKSNKLQYSANDLVELYQEYGAYIFQSS
FWRKSIASWLSGSQYSYRNMEFILNKYFGESTMADVASNLLLTSYDIHNSCEFFFKSWKEKNIKLKDALRATTAAPTYFT
PKRLKISQTERVLIDGGVFANNPAACAYASAKRLFPNDEIILLSIGTGRTDRSIKYANSRKFGKIGWVKPLLNVMFASGL
DCVDYQLEQVIDDKYIRIQSQLKIASPDMDNITSKNIKSLQQEAKAMIEDNQKVIEKFCIDILNI

Specific function: Unknown

COG id: COG3621

COG function: function code R; Patatin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17544092, Length=233, Percent_Identity=31.7596566523605, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17551040, Length=247, Percent_Identity=25.9109311740891, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17567809, Length=193, Percent_Identity=30.0518134715026, Blast_Score=67, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34441; Mature: 34310

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKYILSVDGGGIRGIIPAIILAEIEKRTRRTIAEIFDLMAGTSTGGIIVAGLCKSNKLQ
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCE
YSANDLVELYQEYGAYIFQSSFWRKSIASWLSGSQYSYRNMEFILNKYFGESTMADVASN
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
LLLTSYDIHNSCEFFFKSWKEKNIKLKDALRATTAAPTYFTPKRLKISQTERVLIDGGVF
HHHEECCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEECCCCEEEEECCEE
ANNPAACAYASAKRLFPNDEIILLSIGTGRTDRSIKYANSRKFGKIGWVKPLLNVMFASG
CCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCC
LDCVDYQLEQVIDDKYIRIQSQLKIASPDMDNITSKNIKSLQQEAKAMIEDNQKVIEKFC
CCHHHHHHHHHHCHHHEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IDILNI
HHHHCC
>Mature Secondary Structure 
AKYILSVDGGGIRGIIPAIILAEIEKRTRRTIAEIFDLMAGTSTGGIIVAGLCKSNKLQ
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCE
YSANDLVELYQEYGAYIFQSSFWRKSIASWLSGSQYSYRNMEFILNKYFGESTMADVASN
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
LLLTSYDIHNSCEFFFKSWKEKNIKLKDALRATTAAPTYFTPKRLKISQTERVLIDGGVF
HHHEECCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEECCCCEEEEECCEE
ANNPAACAYASAKRLFPNDEIILLSIGTGRTDRSIKYANSRKFGKIGWVKPLLNVMFASG
CCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCC
LDCVDYQLEQVIDDKYIRIQSQLKIASPDMDNITSKNIKSLQQEAKAMIEDNQKVIEKFC
CCHHHHHHHHHHCHHHEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IDILNI
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA