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The map label for this gene is 190571691

Identifier: 190571691

GI number: 190571691

Start: 1396568

End: 1398316

Strand: Direct

Name: 190571691

Synonym: WPa_1318

Alternate gene names: NA

Gene position: 1396568-1398316 (Clockwise)

Preceding gene: 190571690

Following gene: 190571694

Centisome position: 94.21

GC content: 32.76

Gene sequence:

>1749_bases
ATGGAGTTTTGCATTACTGAATCAAGACAAGAGATAAAAATGTTATTGGCTCACAATATTAAAGAGTGTCTGTCTTACTT
ATTGCCTGGTGGTAAATTTGGTTATGGGTTCTATTCTGGAAATATTAATAAAGACCACTTGATGGTAGTGGCAGAAGGTA
AGCAAACTGGCACTTGGTATAACTGTGATAAGAAAACTAACGGAGATATTATTGAACTCTGGAGCATAATAACCAATAAA
ACTGATTTTTCTGAGATTACCAGCCTTATAACCAAGTGGCTTAGTGAGCGTATAATAGCAAAATATAGCTACCTTGATAA
AAATAATGAGGCTATAGCTTATGTTTATTTGTATAAAAACAATTATAGACATATATGGAATCTAAGAACCTCTAGGAATG
GTCTGAAGCCATTATATAACATTCCCGGTATTATTAAGTCTGATGAAGTGATTATAGTTAAAGGTGAAAACCGTGCTGAT
AGTTTAATAAAGAGAGGTTTTACAGCAACAACTGCAATAGATGATGATATTGAGAAAACGGATTGGTCTATGCTAACAGA
TAAGCATATAATAATTTGGCCGGAAAAAGATGAACAATATGTTAAAAAAGTAGCAGTGGAACTAGACAATTTAGGTATGT
CCTGTGAGAATCCTGAAAGTTTAGGTATATCATCTGAGAACCGTGAAAGTTTAAGTGTATTATCTGAGAAAAAAGCATTT
CCTGCTAGTCATTATCTAAATGATAAATCTCCATCACCAGAGGATATAATTTTACCGAGAATTCTTACTCCTGGAGGACT
TTTACTACTTGGAGGAGCTCCAAAGGTTGGCAAGACTGATCTACTGCTTTCTTGGTTAGCACATCTGTCAGCGGGACTAC
CGTTTTTGAGTATGGTTCCAATTAGACCATTAAAGATCTTTTATCTTCAAACTGATCTTGAATATCCCTACATTAAGGAA
CGGCTACAACAATTGAAATTTGATGATAAATCTCTAGAATTAATATCAAAAAATTTAATTATTACACCAAAAACAAGCTT
ACTTTTGAATTCTCAAGGAGTAGAAGAAGTAAAAGATATTATAGCAGAGAGACTAGACGTTAAAACAGTTGATATCATTG
CTATAGATACACTACGTGGTGTTTTTGATTTCAATCAATATAAAGGAGAAAATAGTAATAGCTCGATGTTTTGTTTTTTA
AAAGATAGAGTTGAAAAATTGAGGTCTATAACAAACCCTAGTTGTGGAATCATTTTAACGCACAATACTAACAAGGTATC
GAAAAAGTCATTAGTAGAGGAACCATTTCAAAACTTTAGCGGAGCATCGGCTTTAAGAAGTTTTTATACTTCAGGGATAA
TGATGATCAAGCCAAACGGAGAACAAAATACTCGTCAATTGATATTTGAACTTAGAAATGGTAAATCTATTTTACCTATG
CAGATCGAAAAAGTAAATGACAGTTGGCAAACTGTATCAGAAAAACCAACTGTAAAACAACGTCGAAAAAAAAGTTATGA
CATCATTTTACGGTTAATTAATGAGAGAGCAGCTAAGGGAAAATTTTATACTAAAAGCCAATTTTGCTATTTATTTGAAG
ATACATTTGGTTTGAAGAGTTGTCATTCCATTCGTAGATATGTTAACGCATTAGTTGCTTCAGGTTATATTAAATTCTAT
GAAAAAGAAATACCAGAGCGCGTAAAAGTTATGAAAGTGGCTGAGCATTTAACGAGGAGAGATATTTAA

Upstream 100 bases:

>100_bases
TACGGTCATTACTCCTGAACAAGAGAAAAATTCAGACGCTGATTGGATACCATTCTAAATAAATTGCAACTATTTTTATA
GTAAATTAATCGGAGGTTAC

Downstream 100 bases:

>100_bases
TAACACTCATTTTTTAAGAACAATAGTAAAAGGATTAAGCCTGTAGCCATATTCCTTAGTACCTATCCCTGACCATGGCA
GAGTTTGAATAATATCGTCT

Product: putative phage related protein

Products: NA

Alternate protein names: TOPRIM Domain-Containing Protein; Regulatory Protein RepA; Bacteriophage-Related Protein; Bacteriophage Related Protein; Prim Domain Protein; DNA Primase Phage/Plasmid; DNA Primase

Number of amino acids: Translated: 582; Mature: 582

Protein sequence:

>582_residues
MEFCITESRQEIKMLLAHNIKECLSYLLPGGKFGYGFYSGNINKDHLMVVAEGKQTGTWYNCDKKTNGDIIELWSIITNK
TDFSEITSLITKWLSERIIAKYSYLDKNNEAIAYVYLYKNNYRHIWNLRTSRNGLKPLYNIPGIIKSDEVIIVKGENRAD
SLIKRGFTATTAIDDDIEKTDWSMLTDKHIIIWPEKDEQYVKKVAVELDNLGMSCENPESLGISSENRESLSVLSEKKAF
PASHYLNDKSPSPEDIILPRILTPGGLLLLGGAPKVGKTDLLLSWLAHLSAGLPFLSMVPIRPLKIFYLQTDLEYPYIKE
RLQQLKFDDKSLELISKNLIITPKTSLLLNSQGVEEVKDIIAERLDVKTVDIIAIDTLRGVFDFNQYKGENSNSSMFCFL
KDRVEKLRSITNPSCGIILTHNTNKVSKKSLVEEPFQNFSGASALRSFYTSGIMMIKPNGEQNTRQLIFELRNGKSILPM
QIEKVNDSWQTVSEKPTVKQRRKKSYDIILRLINERAAKGKFYTKSQFCYLFEDTFGLKSCHSIRRYVNALVASGYIKFY
EKEIPERVKVMKVAEHLTRRDI

Sequences:

>Translated_582_residues
MEFCITESRQEIKMLLAHNIKECLSYLLPGGKFGYGFYSGNINKDHLMVVAEGKQTGTWYNCDKKTNGDIIELWSIITNK
TDFSEITSLITKWLSERIIAKYSYLDKNNEAIAYVYLYKNNYRHIWNLRTSRNGLKPLYNIPGIIKSDEVIIVKGENRAD
SLIKRGFTATTAIDDDIEKTDWSMLTDKHIIIWPEKDEQYVKKVAVELDNLGMSCENPESLGISSENRESLSVLSEKKAF
PASHYLNDKSPSPEDIILPRILTPGGLLLLGGAPKVGKTDLLLSWLAHLSAGLPFLSMVPIRPLKIFYLQTDLEYPYIKE
RLQQLKFDDKSLELISKNLIITPKTSLLLNSQGVEEVKDIIAERLDVKTVDIIAIDTLRGVFDFNQYKGENSNSSMFCFL
KDRVEKLRSITNPSCGIILTHNTNKVSKKSLVEEPFQNFSGASALRSFYTSGIMMIKPNGEQNTRQLIFELRNGKSILPM
QIEKVNDSWQTVSEKPTVKQRRKKSYDIILRLINERAAKGKFYTKSQFCYLFEDTFGLKSCHSIRRYVNALVASGYIKFY
EKEIPERVKVMKVAEHLTRRDI
>Mature_582_residues
MEFCITESRQEIKMLLAHNIKECLSYLLPGGKFGYGFYSGNINKDHLMVVAEGKQTGTWYNCDKKTNGDIIELWSIITNK
TDFSEITSLITKWLSERIIAKYSYLDKNNEAIAYVYLYKNNYRHIWNLRTSRNGLKPLYNIPGIIKSDEVIIVKGENRAD
SLIKRGFTATTAIDDDIEKTDWSMLTDKHIIIWPEKDEQYVKKVAVELDNLGMSCENPESLGISSENRESLSVLSEKKAF
PASHYLNDKSPSPEDIILPRILTPGGLLLLGGAPKVGKTDLLLSWLAHLSAGLPFLSMVPIRPLKIFYLQTDLEYPYIKE
RLQQLKFDDKSLELISKNLIITPKTSLLLNSQGVEEVKDIIAERLDVKTVDIIAIDTLRGVFDFNQYKGENSNSSMFCFL
KDRVEKLRSITNPSCGIILTHNTNKVSKKSLVEEPFQNFSGASALRSFYTSGIMMIKPNGEQNTRQLIFELRNGKSILPM
QIEKVNDSWQTVSEKPTVKQRRKKSYDIILRLINERAAKGKFYTKSQFCYLFEDTFGLKSCHSIRRYVNALVASGYIKFY
EKEIPERVKVMKVAEHLTRRDI

Specific function: Unknown

COG id: COG0358

COG function: function code L; DNA primase (bacterial type)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66636; Mature: 66636

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFCITESRQEIKMLLAHNIKECLSYLLPGGKFGYGFYSGNINKDHLMVVAEGKQTGTWY
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECEEEECCCCCCEEEEEECCCCCCCEE
NCDKKTNGDIIELWSIITNKTDFSEITSLITKWLSERIIAKYSYLDKNNEAIAYVYLYKN
CCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEC
NYRHIWNLRTSRNGLKPLYNIPGIIKSDEVIIVKGENRADSLIKRGFTATTAIDDDIEKT
CCEEEEEEECCCCCCCCHHCCCCCCCCCCEEEEECCCHHHHHHHCCCCEEECCCCCCHHC
DWSMLTDKHIIIWPEKDEQYVKKVAVELDNLGMSCENPESLGISSENRESLSVLSEKKAF
CHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHCCC
PASHYLNDKSPSPEDIILPRILTPGGLLLLGGAPKVGKTDLLLSWLAHLSAGLPFLSMVP
CHHHCCCCCCCCCCCEEECEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHCC
IRPLKIFYLQTDLEYPYIKERLQQLKFDDKSLELISKNLIITPKTSLLLNSQGVEEVKDI
CCCEEEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHCCEEECCCHHEEECCCCHHHHHHH
IAERLDVKTVDIIAIDTLRGVFDFNQYKGENSNSSMFCFLKDRVEKLRSITNPSCGIILT
HHHHCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCCCCCEEEE
HNTNKVSKKSLVEEPFQNFSGASALRSFYTSGIMMIKPNGEQNTRQLIFELRNGKSILPM
ECCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHCCCCEECCE
QIEKVNDSWQTVSEKPTVKQRRKKSYDIILRLINERAAKGKFYTKSQFCYLFEDTFGLKS
EHEECCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCCHHH
CHSIRRYVNALVASGYIKFYEKEIPERVKVMKVAEHLTRRDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEFCITESRQEIKMLLAHNIKECLSYLLPGGKFGYGFYSGNINKDHLMVVAEGKQTGTWY
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECEEEECCCCCCEEEEEECCCCCCCEE
NCDKKTNGDIIELWSIITNKTDFSEITSLITKWLSERIIAKYSYLDKNNEAIAYVYLYKN
CCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEC
NYRHIWNLRTSRNGLKPLYNIPGIIKSDEVIIVKGENRADSLIKRGFTATTAIDDDIEKT
CCEEEEEEECCCCCCCCHHCCCCCCCCCCEEEEECCCHHHHHHHCCCCEEECCCCCCHHC
DWSMLTDKHIIIWPEKDEQYVKKVAVELDNLGMSCENPESLGISSENRESLSVLSEKKAF
CHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHCCC
PASHYLNDKSPSPEDIILPRILTPGGLLLLGGAPKVGKTDLLLSWLAHLSAGLPFLSMVP
CHHHCCCCCCCCCCCEEECEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHCC
IRPLKIFYLQTDLEYPYIKERLQQLKFDDKSLELISKNLIITPKTSLLLNSQGVEEVKDI
CCCEEEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHCCEEECCCHHEEECCCCHHHHHHH
IAERLDVKTVDIIAIDTLRGVFDFNQYKGENSNSSMFCFLKDRVEKLRSITNPSCGIILT
HHHHCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCCCCCEEEE
HNTNKVSKKSLVEEPFQNFSGASALRSFYTSGIMMIKPNGEQNTRQLIFELRNGKSILPM
ECCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHCCCCEECCE
QIEKVNDSWQTVSEKPTVKQRRKKSYDIILRLINERAAKGKFYTKSQFCYLFEDTFGLKS
EHEECCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCCHHH
CHSIRRYVNALVASGYIKFYEKEIPERVKVMKVAEHLTRRDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA