Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
---|---|
Accession | NC_010981 |
Length | 1,482,455 |
Click here to switch to the map view.
The map label for this gene is 190571688
Identifier: 190571688
GI number: 190571688
Start: 1394338
End: 1395162
Strand: Direct
Name: 190571688
Synonym: WPa_1315
Alternate gene names: NA
Gene position: 1394338-1395162 (Clockwise)
Preceding gene: 190571687
Following gene: 190571689
Centisome position: 94.06
GC content: 37.58
Gene sequence:
>825_bases ATGACTTTAAAAATAATAAATAGTGAACAAAGAGTAAAAATGGTAACAGGTGTGAAGATAGTAATCTTCGGACCATATGG AATTGGTAAGACCAGTCTGCTTAAAACTTTGAATGAACCGACACTTTGTCTTGATTTTGAAGCTGGGCTACTTGCTGTTC AAGATTGGCAAGGGGATTCTATAAGTATTCGTACCTGGAATCAAGCTCGCGATATTGCCTGCCTAATTGGTGGACCTAAT CCTGCATTAAAATCTGATTCAGCATATAGTCAAAGACACTATGAGCATGTATTCAGTAAGTACAAAGATCTAGAATTCTC TAAATATAGCTGTATTTTTATCGACAGTATTACAGTAGCCTCGCGGTTATGTCTTTTATGGGCAAAAATGCAACCAGAAG CTTTCTCTGACAGAAATGGCAAACAAGACATGAGAGCTGCATACGGGTTACTTGCTCAAGAAATGATGGCTTGGCTCAAT CAGTTTCAACATATTCCCAATAAAGATATCATTACAGTTGGTACGTTAGGTCAATATTTAGATGACTTCAATCGCCCAAC TTGGCTACCACAATGCGAAGGAGCTAAAACTGCCAGTGAAATACCTGGTATTGTTGATGAAGTAATTAGCATGGTAAGCA TCAAGAAGGATGATGGTACAGAGGTACGTTCCTTTGTTTGCCATACTATTAATTCTTGGGGATATCCTGCTAAAGATCGT AGTGGTTGCCTTGATATGGTTGAAGAGCCGCATTTAGGTAAATTACTTACAAAAATCAAAACTAAAACCTTTTCTACTTC TACTCAATTTATGCCACACAACTAA
Upstream 100 bases:
>100_bases AATACGCGCTAAACTTGCTCATCTCAAAATATATTTATGAAAATTTTTGAACAAATCGTCGTCATTTTGCGATTACATAT TATGAAGGGGTAATAAAACT
Downstream 100 bases:
>100_bases CTTTTGGAGGTTACATATGTTACAAGACTTTTTAACTACTGGTCAAAAGATTCCCTTTTTCAGTATGAAAGAATATTTGA ATGACCAATCATCTATACCG
Product: putative phage related protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MTLKIINSEQRVKMVTGVKIVIFGPYGIGKTSLLKTLNEPTLCLDFEAGLLAVQDWQGDSISIRTWNQARDIACLIGGPN PALKSDSAYSQRHYEHVFSKYKDLEFSKYSCIFIDSITVASRLCLLWAKMQPEAFSDRNGKQDMRAAYGLLAQEMMAWLN QFQHIPNKDIITVGTLGQYLDDFNRPTWLPQCEGAKTASEIPGIVDEVISMVSIKKDDGTEVRSFVCHTINSWGYPAKDR SGCLDMVEEPHLGKLLTKIKTKTFSTSTQFMPHN
Sequences:
>Translated_274_residues MTLKIINSEQRVKMVTGVKIVIFGPYGIGKTSLLKTLNEPTLCLDFEAGLLAVQDWQGDSISIRTWNQARDIACLIGGPN PALKSDSAYSQRHYEHVFSKYKDLEFSKYSCIFIDSITVASRLCLLWAKMQPEAFSDRNGKQDMRAAYGLLAQEMMAWLN QFQHIPNKDIITVGTLGQYLDDFNRPTWLPQCEGAKTASEIPGIVDEVISMVSIKKDDGTEVRSFVCHTINSWGYPAKDR SGCLDMVEEPHLGKLLTKIKTKTFSTSTQFMPHN >Mature_273_residues TLKIINSEQRVKMVTGVKIVIFGPYGIGKTSLLKTLNEPTLCLDFEAGLLAVQDWQGDSISIRTWNQARDIACLIGGPNP ALKSDSAYSQRHYEHVFSKYKDLEFSKYSCIFIDSITVASRLCLLWAKMQPEAFSDRNGKQDMRAAYGLLAQEMMAWLNQ FQHIPNKDIITVGTLGQYLDDFNRPTWLPQCEGAKTASEIPGIVDEVISMVSIKKDDGTEVRSFVCHTINSWGYPAKDRS GCLDMVEEPHLGKLLTKIKTKTFSTSTQFMPHN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30811; Mature: 30680
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKIINSEQRVKMVTGVKIVIFGPYGIGKTSLLKTLNEPTLCLDFEAGLLAVQDWQGDS CEEEEECCCCCEEEECCEEEEEECCCCCCHHHHHHHCCCCCEEEEECCCEEEEECCCCCE ISIRTWNQARDIACLIGGPNPALKSDSAYSQRHYEHVFSKYKDLEFSKYSCIFIDSITVA EEEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHH SRLCLLWAKMQPEAFSDRNGKQDMRAAYGLLAQEMMAWLNQFQHIPNKDIITVGTLGQYL HHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHH DDFNRPTWLPQCEGAKTASEIPGIVDEVISMVSIKKDDGTEVRSFVCHTINSWGYPAKDR HHCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCC SGCLDMVEEPHLGKLLTKIKTKTFSTSTQFMPHN CCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TLKIINSEQRVKMVTGVKIVIFGPYGIGKTSLLKTLNEPTLCLDFEAGLLAVQDWQGDS EEEEECCCCCEEEECCEEEEEECCCCCCHHHHHHHCCCCCEEEEECCCEEEEECCCCCE ISIRTWNQARDIACLIGGPNPALKSDSAYSQRHYEHVFSKYKDLEFSKYSCIFIDSITVA EEEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHH SRLCLLWAKMQPEAFSDRNGKQDMRAAYGLLAQEMMAWLNQFQHIPNKDIITVGTLGQYL HHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHH DDFNRPTWLPQCEGAKTASEIPGIVDEVISMVSIKKDDGTEVRSFVCHTINSWGYPAKDR HHCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCC SGCLDMVEEPHLGKLLTKIKTKTFSTSTQFMPHN CCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA