Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
---|---|
Accession | NC_010981 |
Length | 1,482,455 |
Click here to switch to the map view.
The map label for this gene is yhcG [H]
Identifier: 190571678
GI number: 190571678
Start: 1383152
End: 1384183
Strand: Reverse
Name: yhcG [H]
Synonym: WPa_1305
Alternate gene names: 190571678
Gene position: 1384183-1383152 (Counterclockwise)
Preceding gene: 190571679
Following gene: 190571677
Centisome position: 93.37
GC content: 33.72
Gene sequence:
>1032_bases ATGACAAAAATTATAGCAAAAGAATATACAGAATTTTTAGAGCAGCTGAAAGAACAGATTGCTATTAGTCGTTATAAAGC AGCAAGAACAGTAAATAAAGAGCTACTACTACTTTATCATTATATTGGAACACAGATTCTAGAAAAACAAAAGAGCCAAG GTTGGGGATCCAAAGTAATTGAGCAGTTAAGTAGAGACTTAAAGGCTGAGTTTCCAGAAATGAAAGGTTTTAGCACAAGA AATCTAAAATATATGAGGCAGTTTGCAGGGGAATATCAAGATATTGAATTTGTGCAACAACTTGTTGCCCAATTGCCATG GGGACATAATGTATTTCTGATGGACTTAGTTCGGGACAAAGAAGCGAGGCTATTCTACATAAAAGAAGCTATAGAACATG GCTGGTCAAGAAACATCATGGTAATGCAGATTGAACTTGGGTTACATAAACGTCAAGGAAAGGCTATCACTAATTTTAAA GAGAAGTTACCTTCACCTCAATCAGATCTAGCGCATTACACGTTAAAAGATCCATATATTTTTGATTTTTTAAGTATAGG AAAGGATGCTCATGAAAGAGAAGTAGAAAAAGGTCTTGTAGGACATATGGAGAAGTTTTTGTTAGAACTTGGTGAAGGCT TTGCATTTGTAGGTAGACAATTTCATTTAGATGTTGGTGATGAAGACTTCTTTGTCGATCTATTATTCTACCATCTAAAA TTACGTTGTTTTATAGTAATTGAATTGAAAGATAATAAGTTTAAACCAGAATACGCCGGTAAAATGAATTTCTACCTTTC AGCAGTAGATGACTTGCTAAAACACGAGACAGATCAACCATCTGTAGGGTTGATTTTATGTAAATCTAAAAATGATGTAC TAGCAAAATACACTCTAAAAGATATGACAAAACCAATAGGACTAGCAGAATATCGAATAACTGAAAGTCTACCAGAGAAT ATAAAGACAGCTTTACCAACGATAGAGGAATTAGAAGCTGAGTTATCTAAAGTTTCAGATAAAGAGAAGTAA
Upstream 100 bases:
>100_bases AGGCTGAGTTAAAAGTTGCAGGCATGAGGCCAAAGAGGAAAATTGTTTTTTCAACGAGTAAGGGGATCATATAATGATGA AAATCGTTGAAAGGAACCGT
Downstream 100 bases:
>100_bases TGCTACTCAAATCATTCAAACAACTATTTAGTAAGCCAAAAATCAAAAGCTCAGCCTGGGATGCAGCAGGATCAGGAAGA AGATTTTTTCACTTTCAACC
Product: phage uncharacterized protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MTKIIAKEYTEFLEQLKEQIAISRYKAARTVNKELLLLYHYIGTQILEKQKSQGWGSKVIEQLSRDLKAEFPEMKGFSTR NLKYMRQFAGEYQDIEFVQQLVAQLPWGHNVFLMDLVRDKEARLFYIKEAIEHGWSRNIMVMQIELGLHKRQGKAITNFK EKLPSPQSDLAHYTLKDPYIFDFLSIGKDAHEREVEKGLVGHMEKFLLELGEGFAFVGRQFHLDVGDEDFFVDLLFYHLK LRCFIVIELKDNKFKPEYAGKMNFYLSAVDDLLKHETDQPSVGLILCKSKNDVLAKYTLKDMTKPIGLAEYRITESLPEN IKTALPTIEELEAELSKVSDKEK
Sequences:
>Translated_343_residues MTKIIAKEYTEFLEQLKEQIAISRYKAARTVNKELLLLYHYIGTQILEKQKSQGWGSKVIEQLSRDLKAEFPEMKGFSTR NLKYMRQFAGEYQDIEFVQQLVAQLPWGHNVFLMDLVRDKEARLFYIKEAIEHGWSRNIMVMQIELGLHKRQGKAITNFK EKLPSPQSDLAHYTLKDPYIFDFLSIGKDAHEREVEKGLVGHMEKFLLELGEGFAFVGRQFHLDVGDEDFFVDLLFYHLK LRCFIVIELKDNKFKPEYAGKMNFYLSAVDDLLKHETDQPSVGLILCKSKNDVLAKYTLKDMTKPIGLAEYRITESLPEN IKTALPTIEELEAELSKVSDKEK >Mature_342_residues TKIIAKEYTEFLEQLKEQIAISRYKAARTVNKELLLLYHYIGTQILEKQKSQGWGSKVIEQLSRDLKAEFPEMKGFSTRN LKYMRQFAGEYQDIEFVQQLVAQLPWGHNVFLMDLVRDKEARLFYIKEAIEHGWSRNIMVMQIELGLHKRQGKAITNFKE KLPSPQSDLAHYTLKDPYIFDFLSIGKDAHEREVEKGLVGHMEKFLLELGEGFAFVGRQFHLDVGDEDFFVDLLFYHLKL RCFIVIELKDNKFKPEYAGKMNFYLSAVDDLLKHETDQPSVGLILCKSKNDVLAKYTLKDMTKPIGLAEYRITESLPENI KTALPTIEELEAELSKVSDKEK
Specific function: Unknown
COG id: COG4804
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789614, Length=337, Percent_Identity=29.673590504451, Blast_Score=159, Evalue=3e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009362 [H]
Pfam domain/function: PF06250 DUF1016 [H]
EC number: NA
Molecular weight: Translated: 39929; Mature: 39798
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIIAKEYTEFLEQLKEQIAISRYKAARTVNKELLLLYHYIGTQILEKQKSQGWGSKVI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH EQLSRDLKAEFPEMKGFSTRNLKYMRQFAGEYQDIEFVQQLVAQLPWGHNVFLMDLVRDK HHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCC EARLFYIKEAIEHGWSRNIMVMQIELGLHKRQGKAITNFKEKLPSPQSDLAHYTLKDPYI CHHHHHHHHHHHCCCCCCEEEEEEEECCCHHCCCHHHHHHHHCCCCHHHHCEEECCCCHH FDFLSIGKDAHEREVEKGLVGHMEKFLLELGEGFAFVGRQFHLDVGDEDFFVDLLFYHLK HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEECCCCCHHHHHHHHHHHH LRCFIVIELKDNKFKPEYAGKMNFYLSAVDDLLKHETDQPSVGLILCKSKNDVLAKYTLK EEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEHHHHHH DMTKPIGLAEYRITESLPENIKTALPTIEELEAELSKVSDKEK HHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure TKIIAKEYTEFLEQLKEQIAISRYKAARTVNKELLLLYHYIGTQILEKQKSQGWGSKVI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH EQLSRDLKAEFPEMKGFSTRNLKYMRQFAGEYQDIEFVQQLVAQLPWGHNVFLMDLVRDK HHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCC EARLFYIKEAIEHGWSRNIMVMQIELGLHKRQGKAITNFKEKLPSPQSDLAHYTLKDPYI CHHHHHHHHHHHCCCCCCEEEEEEEECCCHHCCCHHHHHHHHCCCCHHHHCEEECCCCHH FDFLSIGKDAHEREVEKGLVGHMEKFLLELGEGFAFVGRQFHLDVGDEDFFVDLLFYHLK HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEECCCCCHHHHHHHHHHHH LRCFIVIELKDNKFKPEYAGKMNFYLSAVDDLLKHETDQPSVGLILCKSKNDVLAKYTLK EEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEHHHHHH DMTKPIGLAEYRITESLPENIKTALPTIEELEAELSKVSDKEK HHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]