Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is 190571662
Identifier: 190571662
GI number: 190571662
Start: 1368243
End: 1369070
Strand: Direct
Name: 190571662
Synonym: WPa_1288
Alternate gene names: NA
Gene position: 1368243-1369070 (Clockwise)
Preceding gene: 190571661
Following gene: 190571664
Centisome position: 92.3
GC content: 32.0
Gene sequence:
>828_bases ATGTCAAAAAAAATAGTTAACGCATTGAAATCTGAAGTAAAAAAGCTCAAGTATTCTGATTTAAAATCTATACCAATGAA ATCAGGTGGTTGGAGTAGCATAAACTCTGGTTACAACACATATATTGACCTTGATAGATCACACAACCTTACTATCAACA AACAAAAAATAACCAATGAGCTTATCGAGGAGCTATATTCAAAACATAAAGATCTCATTTTAGGGAATGAAAAAGGGAAA AGAAACTATTGTTTGTTTCTTAAAGTAGTCTTTATGGAAATGTTTATACGTGTTGGTGCAACAGTTCCAAATGACTCTAT TATAGAAGAATTGATAACTAGTTATCATCAAGAAGGATATAATCATTTTTTGTTTCTGCATTTATTAAAGGCTCTTTTTC CACTTGGCTTGCTTGTGTTAGATTCTGATATAATAATAACTTATAGTATGGATTGCCATAGTTCCAATTGTCTAAAACTC AGTTTTAGCATGGAATGTATAAGGGTACTTAGCAGTGATCTTGCTAGTGATATCAAAACACCAGGTTTTTACAGTTCAGT AGAATTTAAACTGAACTGTAAGGGTAGAAATGTAACATATGAAGATGGTAAAGTGTCTCTTATTATTCCGAAAGAGCTGA AAAATTATAAAGCAAGTGGTAGAAGTTTGTGTGACATTACTATTGAGTATTTTCAAGAATTTTTTGGAAATTTGGGATTT AAATTTGAGACAAAAGTGGAACATAGTCTAGGGGAGCCACTGAAGGTGTTAAATGATGTAAGTGTGCTTTGCTCTCAGTT AGAATGTATCCGTTCAGCAGAGTGGTAA
Upstream 100 bases:
>100_bases TTTTAATAAGGTGAGTATAATAAAAAGTAAATCAAGTTTTACAGAAAACCTTTACTTATGATGAAAAGTACGTAATACGT ATATAATATAAGATTGTGAT
Downstream 100 bases:
>100_bases AATAAATTAGACGAAACTAATAAGTGGGTATCATGAAAATCCAGTCTTTTCATGCAAAAAAAAATGATGTCATTCCAGCG CGTGACCAGTTCTGATTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MSKKIVNALKSEVKKLKYSDLKSIPMKSGGWSSINSGYNTYIDLDRSHNLTINKQKITNELIEELYSKHKDLILGNEKGK RNYCLFLKVVFMEMFIRVGATVPNDSIIEELITSYHQEGYNHFLFLHLLKALFPLGLLVLDSDIIITYSMDCHSSNCLKL SFSMECIRVLSSDLASDIKTPGFYSSVEFKLNCKGRNVTYEDGKVSLIIPKELKNYKASGRSLCDITIEYFQEFFGNLGF KFETKVEHSLGEPLKVLNDVSVLCSQLECIRSAEW
Sequences:
>Translated_275_residues MSKKIVNALKSEVKKLKYSDLKSIPMKSGGWSSINSGYNTYIDLDRSHNLTINKQKITNELIEELYSKHKDLILGNEKGK RNYCLFLKVVFMEMFIRVGATVPNDSIIEELITSYHQEGYNHFLFLHLLKALFPLGLLVLDSDIIITYSMDCHSSNCLKL SFSMECIRVLSSDLASDIKTPGFYSSVEFKLNCKGRNVTYEDGKVSLIIPKELKNYKASGRSLCDITIEYFQEFFGNLGF KFETKVEHSLGEPLKVLNDVSVLCSQLECIRSAEW >Mature_274_residues SKKIVNALKSEVKKLKYSDLKSIPMKSGGWSSINSGYNTYIDLDRSHNLTINKQKITNELIEELYSKHKDLILGNEKGKR NYCLFLKVVFMEMFIRVGATVPNDSIIEELITSYHQEGYNHFLFLHLLKALFPLGLLVLDSDIIITYSMDCHSSNCLKLS FSMECIRVLSSDLASDIKTPGFYSSVEFKLNCKGRNVTYEDGKVSLIIPKELKNYKASGRSLCDITIEYFQEFFGNLGFK FETKVEHSLGEPLKVLNDVSVLCSQLECIRSAEW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31378; Mature: 31247
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKIVNALKSEVKKLKYSDLKSIPMKSGGWSSINSGYNTYIDLDRSHNLTINKQKITNE CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEHHHHHHH LIEELYSKHKDLILGNEKGKRNYCLFLKVVFMEMFIRVGATVPNDSIIEELITSYHQEGY HHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC NHFLFLHLLKALFPLGLLVLDSDIIITYSMDCHSSNCLKLSFSMECIRVLSSDLASDIKT CHHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHCCC PGFYSSVEFKLNCKGRNVTYEDGKVSLIIPKELKNYKASGRSLCDITIEYFQEFFGNLGF CCCCCEEEEEEEECCCCEEECCCEEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC KFETKVEHSLGEPLKVLNDVSVLCSQLECIRSAEW EEEECHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SKKIVNALKSEVKKLKYSDLKSIPMKSGGWSSINSGYNTYIDLDRSHNLTINKQKITNE CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEHHHHHHH LIEELYSKHKDLILGNEKGKRNYCLFLKVVFMEMFIRVGATVPNDSIIEELITSYHQEGY HHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC NHFLFLHLLKALFPLGLLVLDSDIIITYSMDCHSSNCLKLSFSMECIRVLSSDLASDIKT CHHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHCCC PGFYSSVEFKLNCKGRNVTYEDGKVSLIIPKELKNYKASGRSLCDITIEYFQEFFGNLGF CCCCCEEEEEEEECCCCEEECCCEEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC KFETKVEHSLGEPLKVLNDVSVLCSQLECIRSAEW EEEECHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA