Click here to switch to the map view.

The map label for this gene is ftsY [H]

Identifier: 190571642

GI number: 190571642

Start: 1343304

End: 1344215

Strand: Reverse

Name: ftsY [H]

Synonym: WPa_1267

Alternate gene names: 190571642

Gene position: 1344215-1343304 (Counterclockwise)

Preceding gene: 190571647

Following gene: 190571641

Centisome position: 90.67

GC content: 37.61

Gene sequence:

>912_bases
TTGAGTTTATTCAGTAATCTTTATCAAGGACTATTAAAAACCTCCTCCCGTTTTAGTGGTGGAGTAAAAAATATTTTTTC
TGGCAAAAAAAAATTAGATCAGTCGCTTTTAGATGATCTGGAAGAGCTGCTGATTAGCATGGATATAGGTCATAAAACTT
CTAGATTGCTTATTGATAAGCTCGCAAGTATCAAATTTGAATCAGAAGTTGAGCATAGCGTTATCACACAGCAGTTAATG
AGCGAAATAGAGTCGATATTAAACCCTGTAGTGCAGCCGCTCATTTTGAATAAAAAACCACACATAATAATGGTGTGCGG
AGTGAATGGTAATGGAAAAACTACAACTATAGGTAAACTTGCCTATAAATATAAGGAAAAAGGGAAATCCGTTATGCTTG
TTGCGTGCGACACATTCAGAGCTGCTGCGAGTGAGCAACTAAATATTTGGGCAGAACGTTCTGATTGCTCTATTGTTACT
GGAGAACACGGTAGCGATTCTGCAAGTGTGGCATATAGAGCTGTAAATCAAGCGATAAAAGATAGCGTTGATGTTGTTTT
AATTGATACAGCAGGAAGGCTACAAAACAATGTAAATCTCATGCAAGAGCTGTCAAAAATACATAGAACGATAAAGAAAT
TGGATGATACTGCTCCTCATGATGTTATTTTGGTTCTTGATGCAACTACTGGCCAAAATGCTTATAGCCAATTAGAGGCC
TTTAGTAAAATGGTTGGTGTTACCGGGTTAATTGTAACAAAGCTAGATGGTACTGCCAAAGGTGGAGTAGTGATTGGGCT
TGCAGAAGCTTATAAGGTGAAATTACACGCTATAGGAATTGGTGAAAGTATAGAAGACCTGAGGGAATTTACTGGCAAAG
AGTTTGCTGAAGCGCTGTTTAAATGTGATTGA

Upstream 100 bases:

>100_bases
ACATTTTACTCACAAAATATATAGGTTACGAGTGTATTTACTTTACAAATACATATAGTGCATGTCATTCTTTATATGGT
AATTTTGAAAGGAGTATTTC

Downstream 100 bases:

>100_bases
AGATCTCTTTAATTTTCTCATATGACCAAGCTTAATTATCATGAGAAGCCGTTTTTAGATGGTCTCATTCCAGCATGTGA
CGCTGGTTGCAAGTGATTAT

Product: signal recognition particle protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MSLFSNLYQGLLKTSSRFSGGVKNIFSGKKKLDQSLLDDLEELLISMDIGHKTSRLLIDKLASIKFESEVEHSVITQQLM
SEIESILNPVVQPLILNKKPHIIMVCGVNGNGKTTTIGKLAYKYKEKGKSVMLVACDTFRAAASEQLNIWAERSDCSIVT
GEHGSDSASVAYRAVNQAIKDSVDVVLIDTAGRLQNNVNLMQELSKIHRTIKKLDDTAPHDVILVLDATTGQNAYSQLEA
FSKMVGVTGLIVTKLDGTAKGGVVIGLAEAYKVKLHAIGIGESIEDLREFTGKEFAEALFKCD

Sequences:

>Translated_303_residues
MSLFSNLYQGLLKTSSRFSGGVKNIFSGKKKLDQSLLDDLEELLISMDIGHKTSRLLIDKLASIKFESEVEHSVITQQLM
SEIESILNPVVQPLILNKKPHIIMVCGVNGNGKTTTIGKLAYKYKEKGKSVMLVACDTFRAAASEQLNIWAERSDCSIVT
GEHGSDSASVAYRAVNQAIKDSVDVVLIDTAGRLQNNVNLMQELSKIHRTIKKLDDTAPHDVILVLDATTGQNAYSQLEA
FSKMVGVTGLIVTKLDGTAKGGVVIGLAEAYKVKLHAIGIGESIEDLREFTGKEFAEALFKCD
>Mature_302_residues
SLFSNLYQGLLKTSSRFSGGVKNIFSGKKKLDQSLLDDLEELLISMDIGHKTSRLLIDKLASIKFESEVEHSVITQQLMS
EIESILNPVVQPLILNKKPHIIMVCGVNGNGKTTTIGKLAYKYKEKGKSVMLVACDTFRAAASEQLNIWAERSDCSIVTG
EHGSDSASVAYRAVNQAIKDSVDVVLIDTAGRLQNNVNLMQELSKIHRTIKKLDDTAPHDVILVLDATTGQNAYSQLEAF
SKMVGVTGLIVTKLDGTAKGGVVIGLAEAYKVKLHAIGIGESIEDLREFTGKEFAEALFKCD

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=231, Percent_Identity=32.4675324675325, Blast_Score=128, Evalue=6e-30,
Organism=Homo sapiens, GI226371618, Length=231, Percent_Identity=32.4675324675325, Blast_Score=128, Evalue=6e-30,
Organism=Homo sapiens, GI23308697, Length=307, Percent_Identity=29.3159609120521, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI295424842, Length=307, Percent_Identity=29.3159609120521, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=31.8518518518519, Blast_Score=77, Evalue=1e-14,
Organism=Escherichia coli, GI1789874, Length=302, Percent_Identity=47.682119205298, Blast_Score=257, Evalue=5e-70,
Organism=Escherichia coli, GI1788963, Length=305, Percent_Identity=29.8360655737705, Blast_Score=130, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI17539958, Length=271, Percent_Identity=30.2583025830258, Blast_Score=132, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI193206261, Length=208, Percent_Identity=33.1730769230769, Blast_Score=98, Evalue=6e-21,
Organism=Saccharomyces cerevisiae, GI6325345, Length=203, Percent_Identity=38.423645320197, Blast_Score=133, Evalue=3e-32,
Organism=Saccharomyces cerevisiae, GI6320498, Length=223, Percent_Identity=30.4932735426009, Blast_Score=92, Evalue=1e-19,
Organism=Drosophila melanogaster, GI17647949, Length=272, Percent_Identity=29.4117647058824, Blast_Score=126, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24641198, Length=307, Percent_Identity=28.3387622149837, Blast_Score=105, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 33002; Mature: 32871

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFSNLYQGLLKTSSRFSGGVKNIFSGKKKLDQSLLDDLEELLISMDIGHKTSRLLIDK
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LASIKFESEVEHSVITQQLMSEIESILNPVVQPLILNKKPHIIMVCGVNGNGKTTTIGKL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEHHHHH
AYKYKEKGKSVMLVACDTFRAAASEQLNIWAERSDCSIVTGEHGSDSASVAYRAVNQAIK
HHHHHHCCCEEEEEEECCHHHHCCCHHEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHH
DSVDVVLIDTAGRLQNNVNLMQELSKIHRTIKKLDDTAPHDVILVLDATTGQNAYSQLEA
CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHH
FSKMVGVTGLIVTKLDGTAKGGVVIGLAEAYKVKLHAIGIGESIEDLREFTGKEFAEALF
HHHHHHHHHEEEEECCCCCCCCEEEEECHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHH
KCD
CCC
>Mature Secondary Structure 
SLFSNLYQGLLKTSSRFSGGVKNIFSGKKKLDQSLLDDLEELLISMDIGHKTSRLLIDK
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LASIKFESEVEHSVITQQLMSEIESILNPVVQPLILNKKPHIIMVCGVNGNGKTTTIGKL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEHHHHH
AYKYKEKGKSVMLVACDTFRAAASEQLNIWAERSDCSIVTGEHGSDSASVAYRAVNQAIK
HHHHHHCCCEEEEEEECCHHHHCCCHHEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHH
DSVDVVLIDTAGRLQNNVNLMQELSKIHRTIKKLDDTAPHDVILVLDATTGQNAYSQLEA
CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHH
FSKMVGVTGLIVTKLDGTAKGGVVIGLAEAYKVKLHAIGIGESIEDLREFTGKEFAEALF
HHHHHHHHHEEEEECCCCCCCCEEEEECHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHH
KCD
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]