Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is 190571628
Identifier: 190571628
GI number: 190571628
Start: 1324188
End: 1325213
Strand: Reverse
Name: 190571628
Synonym: WPa_1252
Alternate gene names: NA
Gene position: 1325213-1324188 (Counterclockwise)
Preceding gene: 190571629
Following gene: 190571625
Centisome position: 89.39
GC content: 33.14
Gene sequence:
>1026_bases ATGCCAGTAGCAGTAAATACACCAGGTAACATACAAAGAATGTCGAAATTTAAAAAGGCAAGAGATATTTTACTAGCCCC TGTGAGATGGCTAGTCATTGGTTTAGCTGTAGTATTACTCATAGCATTTATTGTTTTTGTCATAGCGTTAATTCTAGTTG CTCAAGCATTGGGTAAGCTATATCTTCTTGCAGGAGGCAAATTACCAGAATGGTTAGAGCAAAGAACTGAAGCATTTATG GAGGCAGTGCGTGTCCCACAAACAACGCATGATACTAATGTAAATGATGCAATTAATATTAACGTTCAAAAGCTAAAAGA AAACTATGGCGAGCCTGATGTTGATGATAAGTTTATAGAGGAAATAAAAGGATTTATTGATCAGTTAGAGTGTATAGCAA ATGGTACACAAAAAGCTGTGGATAAAGATCAACTCACAGAAGATGAGAAAAAACATGCACTTAAGTGCTTGGAGCGTATA AAAAACAACCCTGATACACATAGTGGAAGCGGATTAACATTGAAGCAAGTTTTAAATTTGGTTTGGAAAGCTTGTAAAGA TGAAAATAAAAAAAGTGCTGATGATAATATAGATATTAATACCCGCATATCACAGAGAAAATATCAACTGGTTAAACATT TAGTAGAATCGCAAACAGAATATGGAGTACTTGTTGGCAGTGCATGTTTTACTGGTACCTTTAACAGTATTGTCTCTTCC TTGTACACTTTTGAAGAATTTTTCTTCTTGCAAAGAGCGGATAAGGCTACTGTAAAACAAGAGTTTGAAAATGATCTACA AAAAAAAGGTGAAGAATTATTTAATCGGCTTTCCAATGATAAAGAAAAAAAAGAAGTTGCAGAAGCTTTAAGTAATCCTT CTACAAATTTCTTTATTAGCTTTATAGAATCATTTAAAAATCACTCTGCACGTGCAGTTTTAGGCGATAAAAGATGTGAT GAACTAATAAAAGAGCATTTTGGTAATCTTCAATATAAACCAACAATATCTTGCTTTATAAAGTAA
Upstream 100 bases:
>100_bases TACTGACCTTACCGAGAAAAAGTAGAGAAGTAGAAATGTGAGTTGACAAAATAAGAGAAATATAGTATATTAATGGTAGT AAGAGTATTTAAAATTAATT
Downstream 100 bases:
>100_bases TCACTTAACTAACGGCAAAGTGATACCATGTTGATTCATATATTTTCCTTTCATATCATCATATGACTTCTCACACTCAC TTTCGCCGCTTAAAAACACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MPVAVNTPGNIQRMSKFKKARDILLAPVRWLVIGLAVVLLIAFIVFVIALILVAQALGKLYLLAGGKLPEWLEQRTEAFM EAVRVPQTTHDTNVNDAININVQKLKENYGEPDVDDKFIEEIKGFIDQLECIANGTQKAVDKDQLTEDEKKHALKCLERI KNNPDTHSGSGLTLKQVLNLVWKACKDENKKSADDNIDINTRISQRKYQLVKHLVESQTEYGVLVGSACFTGTFNSIVSS LYTFEEFFFLQRADKATVKQEFENDLQKKGEELFNRLSNDKEKKEVAEALSNPSTNFFISFIESFKNHSARAVLGDKRCD ELIKEHFGNLQYKPTISCFIK
Sequences:
>Translated_341_residues MPVAVNTPGNIQRMSKFKKARDILLAPVRWLVIGLAVVLLIAFIVFVIALILVAQALGKLYLLAGGKLPEWLEQRTEAFM EAVRVPQTTHDTNVNDAININVQKLKENYGEPDVDDKFIEEIKGFIDQLECIANGTQKAVDKDQLTEDEKKHALKCLERI KNNPDTHSGSGLTLKQVLNLVWKACKDENKKSADDNIDINTRISQRKYQLVKHLVESQTEYGVLVGSACFTGTFNSIVSS LYTFEEFFFLQRADKATVKQEFENDLQKKGEELFNRLSNDKEKKEVAEALSNPSTNFFISFIESFKNHSARAVLGDKRCD ELIKEHFGNLQYKPTISCFIK >Mature_340_residues PVAVNTPGNIQRMSKFKKARDILLAPVRWLVIGLAVVLLIAFIVFVIALILVAQALGKLYLLAGGKLPEWLEQRTEAFME AVRVPQTTHDTNVNDAININVQKLKENYGEPDVDDKFIEEIKGFIDQLECIANGTQKAVDKDQLTEDEKKHALKCLERIK NNPDTHSGSGLTLKQVLNLVWKACKDENKKSADDNIDINTRISQRKYQLVKHLVESQTEYGVLVGSACFTGTFNSIVSSL YTFEEFFFLQRADKATVKQEFENDLQKKGEELFNRLSNDKEKKEVAEALSNPSTNFFISFIESFKNHSARAVLGDKRCDE LIKEHFGNLQYKPTISCFIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38649; Mature: 38518
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVAVNTPGNIQRMSKFKKARDILLAPVRWLVIGLAVVLLIAFIVFVIALILVAQALGKL CCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLLAGGKLPEWLEQRTEAFMEAVRVPQTTHDTNVNDAININVQKLKENYGEPDVDDKFIE HHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHCCCCCCCHHHHH EIKGFIDQLECIANGTQKAVDKDQLTEDEKKHALKCLERIKNNPDTHSGSGLTLKQVLNL HHHHHHHHHHHHHCCHHHHCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH VWKACKDENKKSADDNIDINTRISQRKYQLVKHLVESQTEYGVLVGSACFTGTFNSIVSS HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LYTFEEFFFLQRADKATVKQEFENDLQKKGEELFNRLSNDKEKKEVAEALSNPSTNFFIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHH FIESFKNHSARAVLGDKRCDELIKEHFGNLQYKPTISCFIK HHHHHHCCCCHHHHCHHHHHHHHHHHHCCCCCCCCHHEECC >Mature Secondary Structure PVAVNTPGNIQRMSKFKKARDILLAPVRWLVIGLAVVLLIAFIVFVIALILVAQALGKL CEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLLAGGKLPEWLEQRTEAFMEAVRVPQTTHDTNVNDAININVQKLKENYGEPDVDDKFIE HHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHCCCCCCCHHHHH EIKGFIDQLECIANGTQKAVDKDQLTEDEKKHALKCLERIKNNPDTHSGSGLTLKQVLNL HHHHHHHHHHHHHCCHHHHCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH VWKACKDENKKSADDNIDINTRISQRKYQLVKHLVESQTEYGVLVGSACFTGTFNSIVSS HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LYTFEEFFFLQRADKATVKQEFENDLQKKGEELFNRLSNDKEKKEVAEALSNPSTNFFIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHH FIESFKNHSARAVLGDKRCDELIKEHFGNLQYKPTISCFIK HHHHHHCCCCHHHHCHHHHHHHHHHHHCCCCCCCCHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA