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The map label for this gene is yrdA [H]

Identifier: 190571614

GI number: 190571614

Start: 1309620

End: 1310144

Strand: Direct

Name: yrdA [H]

Synonym: WPa_1237

Alternate gene names: 190571614

Gene position: 1309620-1310144 (Clockwise)

Preceding gene: 190571609

Following gene: 190571619

Centisome position: 88.34

GC content: 38.29

Gene sequence:

>525_bases
ATGAGCTATCAAATTTTAAAATACAAAGATTATGAACCAAAAATGGATGAAAGTTCTTTTATCGCAGATGGTGTGCGTAT
CATAGGTAACGTTGAAATAGGAAGGAATGCGAGTATCTGGTTTAATTGTGTGATCAGAGGAGATGTTGGATCAATCAAAA
TAGGCGATGGAACGAATATTCAAGATGGCACTGTAATTCATGTAGATAGAAACCCAGGTGGTGATACGATTATTGGTAGT
ATGGTGACGGTAGGACATTTTTGCGTATTACACGCATGCACGGTGCATGATAAAGCATTTATTGGTATGGGCTCTATCAT
AATGGATCATGCGATTGTGGAGTCTGGAGCTATGGTAGCTGCTGGCTCACTGGTGACACATGGAAAAGTGATAAAAAGTG
GTGAAGTATGGGCTGGCAGGCCAGCACAATTCTTCAAAAAAATGTCAGATGAGGAAATAAAACATATTACACAATCTGCA
CAAAATTATATCATGCTGATGAAAGAATATAAGGCTATATGCTAG

Upstream 100 bases:

>100_bases
AATAAAGATTTTAGGAGCATAAGGATCATAAGTCAAGAATATCTTTACCCGAGTAACTTGACTACTGGAACCCAAGTATG
TATTAAACCTTATTTAAATT

Downstream 100 bases:

>100_bases
GTTGAGAAATCTTCAGCTCTGATGCACATTCTACGTTAACTACTTCAAAAGCTTCTTCAACTATAGAATGCTTATCAATA
TAAGCTTCTTCAACTCTAGG

Product: hexapeptide transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MSYQILKYKDYEPKMDESSFIADGVRIIGNVEIGRNASIWFNCVIRGDVGSIKIGDGTNIQDGTVIHVDRNPGGDTIIGS
MVTVGHFCVLHACTVHDKAFIGMGSIIMDHAIVESGAMVAAGSLVTHGKVIKSGEVWAGRPAQFFKKMSDEEIKHITQSA
QNYIMLMKEYKAIC

Sequences:

>Translated_174_residues
MSYQILKYKDYEPKMDESSFIADGVRIIGNVEIGRNASIWFNCVIRGDVGSIKIGDGTNIQDGTVIHVDRNPGGDTIIGS
MVTVGHFCVLHACTVHDKAFIGMGSIIMDHAIVESGAMVAAGSLVTHGKVIKSGEVWAGRPAQFFKKMSDEEIKHITQSA
QNYIMLMKEYKAIC
>Mature_173_residues
SYQILKYKDYEPKMDESSFIADGVRIIGNVEIGRNASIWFNCVIRGDVGSIKIGDGTNIQDGTVIHVDRNPGGDTIIGSM
VTVGHFCVLHACTVHDKAFIGMGSIIMDHAIVESGAMVAAGSLVTHGKVIKSGEVWAGRPAQFFKKMSDEEIKHITQSAQ
NYIMLMKEYKAIC

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=175, Percent_Identity=41.7142857142857, Blast_Score=137, Evalue=3e-34,
Organism=Escherichia coli, GI1787667, Length=159, Percent_Identity=30.8176100628931, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI87081681, Length=163, Percent_Identity=31.2883435582822, Blast_Score=82, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18996; Mature: 18865

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYQILKYKDYEPKMDESSFIADGVRIIGNVEIGRNASIWFNCVIRGDVGSIKIGDGTNI
CCCEEEEECCCCCCCCCCHHHHCCEEEEEEEEECCCCEEEEEEEEECCCCEEEECCCCCC
QDGTVIHVDRNPGGDTIIGSMVTVGHFCVLHACTVHDKAFIGMGSIIMDHAIVESGAMVA
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHCCCEEE
AGSLVTHGKVIKSGEVWAGRPAQFFKKMSDEEIKHITQSAQNYIMLMKEYKAIC
ECCEEECCEEEECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SYQILKYKDYEPKMDESSFIADGVRIIGNVEIGRNASIWFNCVIRGDVGSIKIGDGTNI
CCEEEEECCCCCCCCCCHHHHCCEEEEEEEEECCCCEEEEEEEEECCCCEEEECCCCCC
QDGTVIHVDRNPGGDTIIGSMVTVGHFCVLHACTVHDKAFIGMGSIIMDHAIVESGAMVA
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHCCCEEE
AGSLVTHGKVIKSGEVWAGRPAQFFKKMSDEEIKHITQSAQNYIMLMKEYKAIC
ECCEEECCEEEECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]