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The map label for this gene is yfhC [C]

Identifier: 190571610

GI number: 190571610

Start: 1306819

End: 1307244

Strand: Reverse

Name: yfhC [C]

Synonym: WPa_1233

Alternate gene names: 190571610

Gene position: 1307244-1306819 (Counterclockwise)

Preceding gene: 190571611

Following gene: 190571608

Centisome position: 88.18

GC content: 37.79

Gene sequence:

>426_bases
ATGTTTAAGTACCAATACATGGCACTTGCCATAGAGCAAGCAAAACTTGCTCAGAAAGATGGCGAAGTGCCAATAGGTGC
TGTAATAGTTAATGGAAACAATATCATCTCCTCTGCACACAATATATCTAATGATCCAACTGCACATGCAGAAATGTTAA
CAATTAGACAAGCATTTTCAACTTCCACGCTTTATGAAGCTGAAATGTACGTAACGTTAGAGCCGTGCCCGATGTGCGCT
CAAGCTATCTCTTTTGCAAAAATTAAACGTCTGTACTTCGGGGCTTACAATCCCAAAGGTGGAGGAGTTGAAAACGGCAC
TAGAATATTTCAATTCTGTAACCACATACCTGAAGTTTATGGTGGAATATTAGAAACAAAATGTTCTCTTTTGTTAAAAG
ATTTCTTTGAGAAATTGAGAACTTAG

Upstream 100 bases:

>100_bases
TAGATAGCCTTGTAAAAAGGACAATAGTCCTTAGTGAATTCTATAACCTAGAAAAAATAGAAAAGCCAAGAAAAGAAAAT
TATATTTACCCAAGCACCTA

Downstream 100 bases:

>100_bases
TTTAAGATGTGTGAGATTGTTTCAATATTTTTGGGAGTGTTAAATAAACTGTGTCAAACCGCATTTTTAGTTCAACTCAA
TTTTCAATCTGCCAGGAAAG

Product: cytidine and deoxycytidylate deaminase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MFKYQYMALAIEQAKLAQKDGEVPIGAVIVNGNNIISSAHNISNDPTAHAEMLTIRQAFSTSTLYEAEMYVTLEPCPMCA
QAISFAKIKRLYFGAYNPKGGGVENGTRIFQFCNHIPEVYGGILETKCSLLLKDFFEKLRT

Sequences:

>Translated_141_residues
MFKYQYMALAIEQAKLAQKDGEVPIGAVIVNGNNIISSAHNISNDPTAHAEMLTIRQAFSTSTLYEAEMYVTLEPCPMCA
QAISFAKIKRLYFGAYNPKGGGVENGTRIFQFCNHIPEVYGGILETKCSLLLKDFFEKLRT
>Mature_141_residues
MFKYQYMALAIEQAKLAQKDGEVPIGAVIVNGNNIISSAHNISNDPTAHAEMLTIRQAFSTSTLYEAEMYVTLEPCPMCA
QAISFAKIKRLYFGAYNPKGGGVENGTRIFQFCNHIPEVYGGILETKCSLLLKDFFEKLRT

Specific function: Mutation In This Protein Makes E.Coli Resistant To The Toxic Proteins Encoded By The Gef Gene Family. [C]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI124107608, Length=110, Percent_Identity=35.4545454545455, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI145693172, Length=148, Percent_Identity=39.8648648648649, Blast_Score=103, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17541138, Length=145, Percent_Identity=32.4137931034483, Blast_Score=79, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17554608, Length=114, Percent_Identity=34.2105263157895, Blast_Score=74, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21355527, Length=144, Percent_Identity=29.1666666666667, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 15678; Mature: 15678

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKYQYMALAIEQAKLAQKDGEVPIGAVIVNGNNIISSAHNISNDPTAHAEMLTIRQAFS
CCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEHHCCCCCCCCCHHHHHHHHHHHHC
TSTLYEAEMYVTLEPCPMCAQAISFAKIKRLYFGAYNPKGGGVENGTRIFQFCNHIPEVY
CCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
GGILETKCSLLLKDFFEKLRT
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFKYQYMALAIEQAKLAQKDGEVPIGAVIVNGNNIISSAHNISNDPTAHAEMLTIRQAFS
CCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEHHCCCCCCCCCHHHHHHHHHHHHC
TSTLYEAEMYVTLEPCPMCAQAISFAKIKRLYFGAYNPKGGGVENGTRIFQFCNHIPEVY
CCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
GGILETKCSLLLKDFFEKLRT
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA