Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is 190571519
Identifier: 190571519
GI number: 190571519
Start: 1223493
End: 1224002
Strand: Direct
Name: 190571519
Synonym: WPa_1138
Alternate gene names: NA
Gene position: 1223493-1224002 (Clockwise)
Preceding gene: 190571518
Following gene: 190571520
Centisome position: 82.53
GC content: 34.51
Gene sequence:
>510_bases ATGCTTGTATATGCATATATTAATCTTTGGAGGATAAAAATGAAAAAGTTACTTACTTTCTTGGCTTGCTGTTCTTTGTC AGCACCGTCTTTTGGAGTTGATTGGGTTAAAGATAGAACCTACACCTCTTCGTCGTATGGTATGCTTGGTATTAATTATG ATCTTGGCTATCATTGTACAGATAGCATTAAAATTTCATTTGGTCCTGCAGTTAAACTTGTTATGAGTGAAGGGATTTTA GACGCGGGACTTATGACAAAGCTTCATTATCATTATAAATTTGAAAATACAGATATTACTCCTTATGTTACTTTTGGTGT AGGAGGAGTTGCTAAAATTCCTCTTTCAGAAAATCAAGGGCCAGACGTAGAAGAATTTTTTTCTTATCAAATAGGTTCTG GTATTAATCTTCCACTTTCTGAGAGAACAAGTGTTTTTGCTGGCTACAAGCTGCAGAAGTTTCATGAACTTTCGCATGGG GTTGAATTTGGAATGAGTTTTAATTTGTAA
Upstream 100 bases:
>100_bases AAGATATGCCAATTTGCAATTGCAAGAGAAAGACAAATAACAAAAAAAATAAAATAATTCCAATTTTTTACTTGCAATTT ATACTATTTTTAATATTTAT
Downstream 100 bases:
>100_bases GCTCCGATTGAATGTTTTTAGTGAAGTCTGGTTTGAATTTTTGTTGAAAAAAAGCAAGTGATATAGGCTAAAATGATGAT TGCGGTAGGTAACAAAATGT
Product: Putative outer membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MLVYAYINLWRIKMKKLLTFLACCSLSAPSFGVDWVKDRTYTSSSYGMLGINYDLGYHCTDSIKISFGPAVKLVMSEGIL DAGLMTKLHYHYKFENTDITPYVTFGVGGVAKIPLSENQGPDVEEFFSYQIGSGINLPLSERTSVFAGYKLQKFHELSHG VEFGMSFNL
Sequences:
>Translated_169_residues MLVYAYINLWRIKMKKLLTFLACCSLSAPSFGVDWVKDRTYTSSSYGMLGINYDLGYHCTDSIKISFGPAVKLVMSEGIL DAGLMTKLHYHYKFENTDITPYVTFGVGGVAKIPLSENQGPDVEEFFSYQIGSGINLPLSERTSVFAGYKLQKFHELSHG VEFGMSFNL >Mature_169_residues MLVYAYINLWRIKMKKLLTFLACCSLSAPSFGVDWVKDRTYTSSSYGMLGINYDLGYHCTDSIKISFGPAVKLVMSEGIL DAGLMTKLHYHYKFENTDITPYVTFGVGGVAKIPLSENQGPDVEEFFSYQIGSGINLPLSERTSVFAGYKLQKFHELSHG VEFGMSFNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18928; Mature: 18928
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVYAYINLWRIKMKKLLTFLACCSLSAPSFGVDWVKDRTYTSSSYGMLGINYDLGYHCT CEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCEECCCCCCEEEEEECCCEEEC DSIKISFGPAVKLVMSEGILDAGLMTKLHYHYKFENTDITPYVTFGVGGVAKIPLSENQG CCEEEEECCEEEEEECCCCCCCCHHEEEEEEEEECCCCCCEEEEECCCCEEECCCCCCCC PDVEEFFSYQIGSGINLPLSERTSVFAGYKLQKFHELSHGVEFGMSFNL CCHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCCEEECC >Mature Secondary Structure MLVYAYINLWRIKMKKLLTFLACCSLSAPSFGVDWVKDRTYTSSSYGMLGINYDLGYHCT CEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCEECCCCCCEEEEEECCCEEEC DSIKISFGPAVKLVMSEGILDAGLMTKLHYHYKFENTDITPYVTFGVGGVAKIPLSENQG CCEEEEECCEEEEEECCCCCCCCHHEEEEEEEEECCCCCCEEEEECCCCEEECCCCCCCC PDVEEFFSYQIGSGINLPLSERTSVFAGYKLQKFHELSHGVEFGMSFNL CCHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA