Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
---|---|
Accession | NC_010981 |
Length | 1,482,455 |
Click here to switch to the map view.
The map label for this gene is 190571434
Identifier: 190571434
GI number: 190571434
Start: 1113123
End: 1113965
Strand: Direct
Name: 190571434
Synonym: WPa_1047
Alternate gene names: NA
Gene position: 1113123-1113965 (Clockwise)
Preceding gene: 190571433
Following gene: 190571445
Centisome position: 75.09
GC content: 31.32
Gene sequence:
>843_bases TTGATACGTAGCAATAGAGTTAAATCTGGTATAGCAGTTGTAACTAACTTATTGGAAAAAGGTATAAAGCCAGATGATAT CATATTGTTTGGAGACTGCCTAGGTGGACATGTGGCTGCAGAGGTTCATAAAAATTTTAAGGGTAAGGATATACATTTAA GATGTATCGTTAGCAATGCCGCTAGTTCACTTAAACAAGCGTCTCTTTATTACTTTGGTTTTATGGCAAAGTTAAAAATT TTTCTTGCTCCGATAATCAGATTGGTACTGAAGATTTTTGGCTGCCACTGGAAGACATATAAAATCGTAAATTCAATTAC TCCTTATACAATGTACTTTAATCGAGAGGGAGATAAAACGATAAAACAGCCAGCGCAACTTGCAACAGAAATAGAAAAAA TAGATCAAAGCGGTAGAAGAAAAGATTACCAAAAAAAAGAAGTATTTGAAGGATTTGAGGAATATGAAGAATTTTTCAAG CAGCATACAACATTAAGAAAGAATGATAAATGTATTGATTCTAAAAAAGCTGATAAAGATATACATAAATTGCCAATTAC GTGTTTAAAGTCTTCCAACAAAACTGATTACACTTTTCCTGAGTTGATTAGTTTATATATTCACATTACAGATGAATATT TTTCTAAACGTGGCTCATTAAATAATGAAGAGAAAGTTAAAGCATTTAAAGAAAGTAAATTTTATAAAGATTTTTCAAGC TGTAAAAATTCAAAGGACTTTTTGCATAATTACATGAAGAAGCAAGAGATGTCATTTCAGCATGTGACAATAGAATCTGG GGAAAAAAGACCTTTCTTAACAAGTCAAAGAAGTCTAGGGTAG
Upstream 100 bases:
>100_bases TTAAGCCCTGGTAAAGATTATTCCCAAAATTGGAATTGGGCCACAGAGCAATGTACATCTTTTTAATTATCCTGGACTTG GTTTAAGTAAAAACAGTTCA
Downstream 100 bases:
>100_bases CGAGCTTTAAACTTTTGACGCATATGCTTTTTTCAACATTTTAGCCATCTGTATCTGTTCAGATGCATGCAAATATTGAA ACCAGTGTTTCTTTTCTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MIRSNRVKSGIAVVTNLLEKGIKPDDIILFGDCLGGHVAAEVHKNFKGKDIHLRCIVSNAASSLKQASLYYFGFMAKLKI FLAPIIRLVLKIFGCHWKTYKIVNSITPYTMYFNREGDKTIKQPAQLATEIEKIDQSGRRKDYQKKEVFEGFEEYEEFFK QHTTLRKNDKCIDSKKADKDIHKLPITCLKSSNKTDYTFPELISLYIHITDEYFSKRGSLNNEEKVKAFKESKFYKDFSS CKNSKDFLHNYMKKQEMSFQHVTIESGEKRPFLTSQRSLG
Sequences:
>Translated_280_residues MIRSNRVKSGIAVVTNLLEKGIKPDDIILFGDCLGGHVAAEVHKNFKGKDIHLRCIVSNAASSLKQASLYYFGFMAKLKI FLAPIIRLVLKIFGCHWKTYKIVNSITPYTMYFNREGDKTIKQPAQLATEIEKIDQSGRRKDYQKKEVFEGFEEYEEFFK QHTTLRKNDKCIDSKKADKDIHKLPITCLKSSNKTDYTFPELISLYIHITDEYFSKRGSLNNEEKVKAFKESKFYKDFSS CKNSKDFLHNYMKKQEMSFQHVTIESGEKRPFLTSQRSLG >Mature_280_residues MIRSNRVKSGIAVVTNLLEKGIKPDDIILFGDCLGGHVAAEVHKNFKGKDIHLRCIVSNAASSLKQASLYYFGFMAKLKI FLAPIIRLVLKIFGCHWKTYKIVNSITPYTMYFNREGDKTIKQPAQLATEIEKIDQSGRRKDYQKKEVFEGFEEYEEFFK QHTTLRKNDKCIDSKKADKDIHKLPITCLKSSNKTDYTFPELISLYIHITDEYFSKRGSLNNEEKVKAFKESKFYKDFSS CKNSKDFLHNYMKKQEMSFQHVTIESGEKRPFLTSQRSLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32491; Mature: 32491
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRSNRVKSGIAVVTNLLEKGIKPDDIILFGDCLGGHVAAEVHKNFKGKDIHLRCIVSNA CCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCEEEEEEEHHH ASSLKQASLYYFGFMAKLKIFLAPIIRLVLKIFGCHWKTYKIVNSITPYTMYFNREGDKT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCHH IKQPAQLATEIEKIDQSGRRKDYQKKEVFEGFEEYEEFFKQHTTLRKNDKCIDSKKADKD HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCH IHKLPITCLKSSNKTDYTFPELISLYIHITDEYFSKRGSLNNEEKVKAFKESKFYKDFSS HHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH CKNSKDFLHNYMKKQEMSFQHVTIESGEKRPFLTSQRSLG HCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MIRSNRVKSGIAVVTNLLEKGIKPDDIILFGDCLGGHVAAEVHKNFKGKDIHLRCIVSNA CCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCEEEEEEEHHH ASSLKQASLYYFGFMAKLKIFLAPIIRLVLKIFGCHWKTYKIVNSITPYTMYFNREGDKT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCHH IKQPAQLATEIEKIDQSGRRKDYQKKEVFEGFEEYEEFFKQHTTLRKNDKCIDSKKADKD HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCH IHKLPITCLKSSNKTDYTFPELISLYIHITDEYFSKRGSLNNEEKVKAFKESKFYKDFSS HHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH CKNSKDFLHNYMKKQEMSFQHVTIESGEKRPFLTSQRSLG HCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA