Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is 190571432
Identifier: 190571432
GI number: 190571432
Start: 1111417
End: 1112814
Strand: Reverse
Name: 190571432
Synonym: WPa_1045
Alternate gene names: NA
Gene position: 1112814-1111417 (Counterclockwise)
Preceding gene: 190571435
Following gene: 190571431
Centisome position: 75.07
GC content: 38.2
Gene sequence:
>1398_bases ATGAACAATATAAACTTTTTAAAATTCATTGAATTATGCTTTCAAACGGTAGTACCGGGGTGTGAGTATAATGATTATCA ATATATAAAAGTCATAGCGGATAGGCTTGAAGCGGCAAGTTCAGGTGAAGTGAAAAGAATAATATTCAATATGCCTCCGC GTTCAATGAAGTCTATTTGTGTAAGTGTTGCATGGCCCGCATGGATACTCGGAAATCAGCCAACTGCAAGAATAATAGTT GCAAGTTATTCTCGGCTCCTCAGCGAAAAGCACTCACTCGATACCAGGTGCATAATGCAATCTGATTGGTATAGAGAGCT ATTTCCGAAAGTAGAATTATGCAAAGATCAAAACACTAAATATAAATTTCAAACAGTGCAAAGAGGATGTAGGATTGCAA CATCAGTTGGGGGAACATTAACCGGTGAAGGTGGAGATTTCATTATCGTGGATGATCCACTAAGTCCCGCACAAGCTTTG AGCGAAACATTTAGAAAGCGTGCTGCAAACTGGTTTGATCAGGCTTTAGTAACCAGGCTCAACGACAGAAAAAAAGGAGT TATCGTTCTTGTGATGCACAGACTCCATTTAGAAGATTTAACTGGTCACCTCCTCTGTAAACCAAGAAACATATGGCATC ATGTCTGTTTACCAATAATAGCTGAAGATAAGGAGATTATTTATTCAGTTAATAATCATATTCCAGAGCATGAACAGGAA ATATACTCAAGAAAAGAAGGTCAATTGTTGTATTCCCTAACTGAAGGAAAAGAAGAAATTGAGATGATAAAAGCTGAACT TGGGAGTTATGGTTTTGCTGCTCAATACCAACAAAACCCTCTACCACTTTCAAGTGCTATAATTAAACGAGAGTGGTTGA AGCGCTATAAAAATTTTCCTGATAGCCTCTTGCATGTAACACAAAGTTGGGATACTGCAATTTCAACAAACAATACAAGT GACTTTAGTGTCTGCACTACCTGGACAAAAGTAGATAATACATTCTATTTACTCGATGTATATCGCGCAAAACTTGAATA TCCAAAACTTAAAGAGAAAGTTCTGTCGCTGGCTGCAAGGTGGAAGCCACACGCAATTTTAATCGAAGCAAAAGCAAGCG GTCAGCAATTGGTTCAGGAGCTCAGGAAAAACAGTGATTTACCTATTATTCAAATAGTACCACATGATGACAAATTAACT CGATTTCACCGAATTGTCCCAATTATAGAATCTGAGCGGGTTTTTCTCCCTAACCAAGCAGTATGGCTTAGCGACTTTGA GTATGAGATTTTAATGTTTCCAGAAATCCGTCACGACGATCAAGTAGACAGTACCGTGCAATATCTTCAGTGGGTGAGAA ATAATATTGCTAGAGTGGTAGCTATACGTTCATTGTAG
Upstream 100 bases:
>100_bases TATAAATTCTCTCTCAGTTTGCTCTCTTGTTTCTTTCATATTTTAACTCTCACTATAATTATACAAAAAAATCTTAAAAA ATCAACAAAATCTCAATTTT
Downstream 100 bases:
>100_bases CTTGAAAAGGTTCCTCGGAATTGTGTATAATTTTTTTAACTGAGTTTTATCCATTTTCTGAATGATATTTTAGGGTTTAT TGAAATAAATACTACGCAAA
Product: phage uncharacterized protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MNNINFLKFIELCFQTVVPGCEYNDYQYIKVIADRLEAASSGEVKRIIFNMPPRSMKSICVSVAWPAWILGNQPTARIIV ASYSRLLSEKHSLDTRCIMQSDWYRELFPKVELCKDQNTKYKFQTVQRGCRIATSVGGTLTGEGGDFIIVDDPLSPAQAL SETFRKRAANWFDQALVTRLNDRKKGVIVLVMHRLHLEDLTGHLLCKPRNIWHHVCLPIIAEDKEIIYSVNNHIPEHEQE IYSRKEGQLLYSLTEGKEEIEMIKAELGSYGFAAQYQQNPLPLSSAIIKREWLKRYKNFPDSLLHVTQSWDTAISTNNTS DFSVCTTWTKVDNTFYLLDVYRAKLEYPKLKEKVLSLAARWKPHAILIEAKASGQQLVQELRKNSDLPIIQIVPHDDKLT RFHRIVPIIESERVFLPNQAVWLSDFEYEILMFPEIRHDDQVDSTVQYLQWVRNNIARVVAIRSL
Sequences:
>Translated_465_residues MNNINFLKFIELCFQTVVPGCEYNDYQYIKVIADRLEAASSGEVKRIIFNMPPRSMKSICVSVAWPAWILGNQPTARIIV ASYSRLLSEKHSLDTRCIMQSDWYRELFPKVELCKDQNTKYKFQTVQRGCRIATSVGGTLTGEGGDFIIVDDPLSPAQAL SETFRKRAANWFDQALVTRLNDRKKGVIVLVMHRLHLEDLTGHLLCKPRNIWHHVCLPIIAEDKEIIYSVNNHIPEHEQE IYSRKEGQLLYSLTEGKEEIEMIKAELGSYGFAAQYQQNPLPLSSAIIKREWLKRYKNFPDSLLHVTQSWDTAISTNNTS DFSVCTTWTKVDNTFYLLDVYRAKLEYPKLKEKVLSLAARWKPHAILIEAKASGQQLVQELRKNSDLPIIQIVPHDDKLT RFHRIVPIIESERVFLPNQAVWLSDFEYEILMFPEIRHDDQVDSTVQYLQWVRNNIARVVAIRSL >Mature_465_residues MNNINFLKFIELCFQTVVPGCEYNDYQYIKVIADRLEAASSGEVKRIIFNMPPRSMKSICVSVAWPAWILGNQPTARIIV ASYSRLLSEKHSLDTRCIMQSDWYRELFPKVELCKDQNTKYKFQTVQRGCRIATSVGGTLTGEGGDFIIVDDPLSPAQAL SETFRKRAANWFDQALVTRLNDRKKGVIVLVMHRLHLEDLTGHLLCKPRNIWHHVCLPIIAEDKEIIYSVNNHIPEHEQE IYSRKEGQLLYSLTEGKEEIEMIKAELGSYGFAAQYQQNPLPLSSAIIKREWLKRYKNFPDSLLHVTQSWDTAISTNNTS DFSVCTTWTKVDNTFYLLDVYRAKLEYPKLKEKVLSLAARWKPHAILIEAKASGQQLVQELRKNSDLPIIQIVPHDDKLT RFHRIVPIIESERVFLPNQAVWLSDFEYEILMFPEIRHDDQVDSTVQYLQWVRNNIARVVAIRSL
Specific function: Unknown
COG id: COG5410
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004921 [H]
Pfam domain/function: PF03237 Terminase_6 [H]
EC number: NA
Molecular weight: Translated: 53828; Mature: 53828
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNINFLKFIELCFQTVVPGCEYNDYQYIKVIADRLEAASSGEVKRIIFNMPPRSMKSIC CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHH VSVAWPAWILGNQPTARIIVASYSRLLSEKHSLDTRCIMQSDWYRELFPKVELCKDQNTK HHHCCCCEEECCCCCCEEHHHHHHHHHHHHHCCCHHEECCCCHHHHHCCHHHHHCCCCCC YKFQTVQRGCRIATSVGGTLTGEGGDFIIVDDPLSPAQALSETFRKRAANWFDQALVTRL CHHHHHHHHHEEECCCCCEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH NDRKKGVIVLVMHRLHLEDLTGHLLCKPRNIWHHVCLPIIAEDKEIIYSVNNHIPEHEQE CCCCCCEEEEEEHHHHHHHCCCCEEECCCHHHHHHHHHHEECCHHHEEEHHCCCCHHHHH IYSRKEGQLLYSLTEGKEEIEMIKAELGSYGFAAQYQQNPLPLSSAIIKREWLKRYKNFP HHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCC DSLLHVTQSWDTAISTNNTSDFSVCTTWTKVDNTFYLLDVYRAKLEYPKLKEKVLSLAAR HHHHHHHHCCCCEEECCCCCCCEEEEEEEECCCEEEEEEHHHHHCCCHHHHHHHHHHHHC WKPHAILIEAKASGQQLVQELRKNSDLPIIQIVPHDDKLTRFHRIVPIIESERVFLPNQA CCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCEECCCEEECCCCE VWLSDFEYEILMFPEIRHDDQVDSTVQYLQWVRNNIARVVAIRSL EEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECC >Mature Secondary Structure MNNINFLKFIELCFQTVVPGCEYNDYQYIKVIADRLEAASSGEVKRIIFNMPPRSMKSIC CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHH VSVAWPAWILGNQPTARIIVASYSRLLSEKHSLDTRCIMQSDWYRELFPKVELCKDQNTK HHHCCCCEEECCCCCCEEHHHHHHHHHHHHHCCCHHEECCCCHHHHHCCHHHHHCCCCCC YKFQTVQRGCRIATSVGGTLTGEGGDFIIVDDPLSPAQALSETFRKRAANWFDQALVTRL CHHHHHHHHHEEECCCCCEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH NDRKKGVIVLVMHRLHLEDLTGHLLCKPRNIWHHVCLPIIAEDKEIIYSVNNHIPEHEQE CCCCCCEEEEEEHHHHHHHCCCCEEECCCHHHHHHHHHHEECCHHHEEEHHCCCCHHHHH IYSRKEGQLLYSLTEGKEEIEMIKAELGSYGFAAQYQQNPLPLSSAIIKREWLKRYKNFP HHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCC DSLLHVTQSWDTAISTNNTSDFSVCTTWTKVDNTFYLLDVYRAKLEYPKLKEKVLSLAAR HHHHHHHHCCCCEEECCCCCCCEEEEEEEECCCEEEEEEHHHHHCCCHHHHHHHHHHHHC WKPHAILIEAKASGQQLVQELRKNSDLPIIQIVPHDDKLTRFHRIVPIIESERVFLPNQA CCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCEECCCEEECCCCE VWLSDFEYEILMFPEIRHDDQVDSTVQYLQWVRNNIARVVAIRSL EEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]