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The map label for this gene is hyfB [C]

Identifier: 190571420

GI number: 190571420

Start: 1097731

End: 1099290

Strand: Reverse

Name: hyfB [C]

Synonym: WPa_1033

Alternate gene names: 190571420

Gene position: 1099290-1097731 (Counterclockwise)

Preceding gene: 190571421

Following gene: 190571419

Centisome position: 74.15

GC content: 33.46

Gene sequence:

>1560_bases
GTGCAACTTTATAAATTTTTATTGCTATTTCTGTTGACTACATTAATAGTGATAGTCCTAATATTACCTGAAAATTTAGG
TACTACACTGAATTGCTCTCATCCAGTTCTAAATTTTGATTTATCTTTTCGTATCGTACTAATATCTTTTTTATCAGTTG
CATTTTTAGCTGTTCTACCAACACAAAATTTGACTTTTTCAGAGATGCTATCTTTTGCTGCTTACACTACCTGTTCACTC
TGTGCAATTTTATCCAAGCAGATGATATTGGTTATAATATTCTGTGAATTAATGACCGTCAGTGCATTTTTTACTATCGC
AGCTGGCTGTAGAGATAGTGGACCTGCAATAAGGTACGCTTGTGTACACTTTTTCGTTGGAGTTATATTAATAGCAGGAT
TGGCACTTCAAAGCACTAACCTGATAATTTGGGGTTTGTTGATAAACTGCGCTTGTTTTCCTTTTTCATTTTGGGTTGTT
GATGCATATCCTGCTGCATCGCTACATGGCACCACATATCTCTCTTTATTTACCACTAAAGTCTCTTTTTTAGTGATGCT
TTTACACACTTATAACCTATGGCAAGATTGTACTGAAATATTAGCGCTTGTAGGCGCCATCACTGCAATTTACAGTATTA
TATTTGCTTCTCTTGAGCAAAATATTCGCAGATTTTTATGCTATAACGTTGTAGGACAAATGGGCTTGCTGATTATTGCA
GGAAGTTTGCTCAGTCCTTCGGAAAAAGCAATACCAATTTTGATACTGCATATAATCTTCTCTCTTGTTTATCAATCATT
ATTGTTTGTGGTCAGTAATTCGATTATTTCACGAACAAGAACAATTAGTTTTAATGGAGTAGGTAAACTGATGTCAGTGG
AAGGCATGTGTGCTATAATTGCAATACTTACAATGGCTGCATTTCCTGGAACCGCTGGATTTATTAGTAAATCATACATT
ACAGCCGAGATTGAAGCAAGTAGTGCTAATTTAGAAGTGTATAAAAACTTATACAAGACTCTAAATTTACTGCTTTATTT
AAGCGTGGGGCTCAAGTTTCTTTACTACATATTTATTGCAAAAAGTAAGTCGAAACCTTTAGCAGATAAGGGAGGCAAAA
TGACTATGATTATTTTAGCATTTATATGCGTAATCGCTGGCAACCCTTACTTACCTATTTACAATAAACCTTCAATTTTT
GATCTGGTGTACAATACACAAAACATTTGGTCTCAGTTTTATTTATTACTATGTACCACTTTATTGTTTATTCCTTTACG
CAAGTTATTTTTGCCAAGAATAAATTTTAAAATGGATGTTGATTGGATTTTTAGAGCTTTCATACCTTATACTGTCTTGC
TGTTCAATCAACTGGTCTTTAAAGTGAGAGAAATGTCTGCCACCGTACTGCAAAACTTGACTAATTCACTTGCTAGTTTA
TACTTTAATAATATTACTAAACTTAAAGAAGTGCTGAGTTATAACTCAGTGAGTTTTGTTTCAGCTTCTTCTCTCTTTTT
AATGAGTATTCTACTAGCGCTATTATGTTTAAATCGTTAA

Upstream 100 bases:

>100_bases
CTGATATAATTATATGGTAATTAGCTTAACTAGTGGTTAATATGCAAATTGATTTTATTTGTATGTTGAGGTAGCATAAA
CCATACTGTTTTACATCATT

Downstream 100 bases:

>100_bases
CCGAAAGTTTAAATTCTGTATTTAGTAAACTGAGAGGAAAGTCAATCATTTCTGAAGATGATTTTAACCTTGCCATGCGT
GAAATACGTATAGCTTTAAT

Product: putative monovalent cation/H+ antiporter subunit D

Products: H2; oxidized ferredoxin [C]

Alternate protein names: NADH/Ubiquinone/Plastoquinone; NADH Dehydrogenase; Oxidoreductase; Multisubunit Sodium/Proton Antiporter Mrpd Subunit; NADH-Quinone Oxidoreductase Subunit N; NADH-Ubiquinone/Plastoquinone; NADH-Ubiquinone Oxidoreductase Protein Chain M; Multisubunit Sodium/Proton Antiporter MrpD Subunit; NADH Dehydrogenase I Chain N

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MQLYKFLLLFLLTTLIVIVLILPENLGTTLNCSHPVLNFDLSFRIVLISFLSVAFLAVLPTQNLTFSEMLSFAAYTTCSL
CAILSKQMILVIIFCELMTVSAFFTIAAGCRDSGPAIRYACVHFFVGVILIAGLALQSTNLIIWGLLINCACFPFSFWVV
DAYPAASLHGTTYLSLFTTKVSFLVMLLHTYNLWQDCTEILALVGAITAIYSIIFASLEQNIRRFLCYNVVGQMGLLIIA
GSLLSPSEKAIPILILHIIFSLVYQSLLFVVSNSIISRTRTISFNGVGKLMSVEGMCAIIAILTMAAFPGTAGFISKSYI
TAEIEASSANLEVYKNLYKTLNLLLYLSVGLKFLYYIFIAKSKSKPLADKGGKMTMIILAFICVIAGNPYLPIYNKPSIF
DLVYNTQNIWSQFYLLLCTTLLFIPLRKLFLPRINFKMDVDWIFRAFIPYTVLLFNQLVFKVREMSATVLQNLTNSLASL
YFNNITKLKEVLSYNSVSFVSASSLFLMSILLALLCLNR

Sequences:

>Translated_519_residues
MQLYKFLLLFLLTTLIVIVLILPENLGTTLNCSHPVLNFDLSFRIVLISFLSVAFLAVLPTQNLTFSEMLSFAAYTTCSL
CAILSKQMILVIIFCELMTVSAFFTIAAGCRDSGPAIRYACVHFFVGVILIAGLALQSTNLIIWGLLINCACFPFSFWVV
DAYPAASLHGTTYLSLFTTKVSFLVMLLHTYNLWQDCTEILALVGAITAIYSIIFASLEQNIRRFLCYNVVGQMGLLIIA
GSLLSPSEKAIPILILHIIFSLVYQSLLFVVSNSIISRTRTISFNGVGKLMSVEGMCAIIAILTMAAFPGTAGFISKSYI
TAEIEASSANLEVYKNLYKTLNLLLYLSVGLKFLYYIFIAKSKSKPLADKGGKMTMIILAFICVIAGNPYLPIYNKPSIF
DLVYNTQNIWSQFYLLLCTTLLFIPLRKLFLPRINFKMDVDWIFRAFIPYTVLLFNQLVFKVREMSATVLQNLTNSLASL
YFNNITKLKEVLSYNSVSFVSASSLFLMSILLALLCLNR
>Mature_519_residues
MQLYKFLLLFLLTTLIVIVLILPENLGTTLNCSHPVLNFDLSFRIVLISFLSVAFLAVLPTQNLTFSEMLSFAAYTTCSL
CAILSKQMILVIIFCELMTVSAFFTIAAGCRDSGPAIRYACVHFFVGVILIAGLALQSTNLIIWGLLINCACFPFSFWVV
DAYPAASLHGTTYLSLFTTKVSFLVMLLHTYNLWQDCTEILALVGAITAIYSIIFASLEQNIRRFLCYNVVGQMGLLIIA
GSLLSPSEKAIPILILHIIFSLVYQSLLFVVSNSIISRTRTISFNGVGKLMSVEGMCAIIAILTMAAFPGTAGFISKSYI
TAEIEASSANLEVYKNLYKTLNLLLYLSVGLKFLYYIFIAKSKSKPLADKGGKMTMIILAFICVIAGNPYLPIYNKPSIF
DLVYNTQNIWSQFYLLLCTTLLFIPLRKLFLPRINFKMDVDWIFRAFIPYTVLLFNQLVFKVREMSATVLQNLTNSLASL
YFNNITKLKEVLSYNSVSFVSASSLFLMSILLALLCLNR

Specific function: Unknown

COG id: COG0651

COG function: function code CP; Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788827, Length=276, Percent_Identity=25, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 57938; Mature: 57938

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLYKFLLLFLLTTLIVIVLILPENLGTTLNCSHPVLNFDLSFRIVLISFLSVAFLAVLP
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEECCHHHHHHHHHHHHHHHHHHHC
TQNLTFSEMLSFAAYTTCSLCAILSKQMILVIIFCELMTVSAFFTIAAGCRDSGPAIRYA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
CVHFFVGVILIAGLALQSTNLIIWGLLINCACFPFSFWVVDAYPAASLHGTTYLSLFTTK
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHH
VSFLVMLLHTYNLWQDCTEILALVGAITAIYSIIFASLEQNIRRFLCYNVVGQMGLLIIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSLLSPSEKAIPILILHIIFSLVYQSLLFVVSNSIISRTRTISFNGVGKLMSVEGMCAII
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHH
AILTMAAFPGTAGFISKSYITAEIEASSANLEVYKNLYKTLNLLLYLSVGLKFLYYIFIA
HHHHHHHCCCCHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KSKSKPLADKGGKMTMIILAFICVIAGNPYLPIYNKPSIFDLVYNTQNIWSQFYLLLCTT
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHH
LLFIPLRKLFLPRINFKMDVDWIFRAFIPYTVLLFNQLVFKVREMSATVLQNLTNSLASL
HHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFNNITKLKEVLSYNSVSFVSASSLFLMSILLALLCLNR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQLYKFLLLFLLTTLIVIVLILPENLGTTLNCSHPVLNFDLSFRIVLISFLSVAFLAVLP
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEECCHHHHHHHHHHHHHHHHHHHC
TQNLTFSEMLSFAAYTTCSLCAILSKQMILVIIFCELMTVSAFFTIAAGCRDSGPAIRYA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
CVHFFVGVILIAGLALQSTNLIIWGLLINCACFPFSFWVVDAYPAASLHGTTYLSLFTTK
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHH
VSFLVMLLHTYNLWQDCTEILALVGAITAIYSIIFASLEQNIRRFLCYNVVGQMGLLIIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSLLSPSEKAIPILILHIIFSLVYQSLLFVVSNSIISRTRTISFNGVGKLMSVEGMCAII
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHH
AILTMAAFPGTAGFISKSYITAEIEASSANLEVYKNLYKTLNLLLYLSVGLKFLYYIFIA
HHHHHHHCCCCHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KSKSKPLADKGGKMTMIILAFICVIAGNPYLPIYNKPSIFDLVYNTQNIWSQFYLLLCTT
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHH
LLFIPLRKLFLPRINFKMDVDWIFRAFIPYTVLLFNQLVFKVREMSATVLQNLTNSLASL
HHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFNNITKLKEVLSYNSVSFVSASSLFLMSILLALLCLNR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton; reduced ferredoxin [C]

Specific reaction: Proton + reduced ferredoxin = H2 + oxidized ferredoxin [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA