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The map label for this gene is yrbE [C]

Identifier: 190571416

GI number: 190571416

Start: 1092675

End: 1093457

Strand: Direct

Name: yrbE [C]

Synonym: WPa_1028

Alternate gene names: 190571416

Gene position: 1092675-1093457 (Clockwise)

Preceding gene: 190571411

Following gene: 190571417

Centisome position: 73.71

GC content: 33.97

Gene sequence:

>783_bases
GTGAGTTCCTTTAATATAGACAGCGTTAGAATAATCGGTAGATGCTTTATGAACTTTCTGTTGAGGATTGGTAACGCATT
TGTATTTTTTATTCAATCTCTATACCACTGCTTTATTCCTCCATATTATTTTAGCAATGTGGCAAGACAAATTATAGAGA
TAGGCTTTTTCTCTTTGCCAATTGTTGGGCTCACTGGAGTTTTTATAGGAGCAGTGATAGTTTTACAGAGTAGCTTAAGT
GGTATATTGATTAATCAAGAACAAGTAGTACCTAAACTTGTTACGATCACTATCATTAAAGAGTTAGGGCCAGTTTTGAT
CAGCTTAATAATGGTAGGAAAGGTTGGGTCCTCAATTGCAGCAGAAATTGGCACGATGCGCATCACTGAACAAATAGATG
CACTTACAACTTTGGACATCAATCCTTTCAAATATTTAATTGTACCAAGAATTCTAGCGTCAGTTATAGTATTTCCAATA
CTTACAGTATGTGCAGATCTAATAGGAATATTTGGAGGGTATGTCACCGCAGTCTTTGAATTTAACCACAATTTAAATAT
ATACATAAAATATACAGCTCAATTCTTTAATATGTACGATTTTATTGTTGGGCTAATGAAAGCGACTGCTTTTGGAGCCA
TAATTTCTGTTTCAAGTTGTTATTACGGTTACCATTGTAGGGAAGGTGCACGAGGAGTAGGTATTGCAACAACATCAACT
GTTGTTATATCCTCTATATTGATAATTTTAGCAAATTACTTAATTACTTTAATACATGCATAG

Upstream 100 bases:

>100_bases
AGTATATTGAACTTAAGACATATCTTGACTATACTCTGGCGAAGTTAATAAAAATTTTAATAAAATCAGTAAAACTAATT
TTAGCTAAGATAAATGTAAA

Downstream 100 bases:

>100_bases
CCCCATAATATCAATATTGAATATAAGCTTATCCTTTGATGATAGAACGATATTAAACAACATAACTTTCAATATATCGA
AAGGAGAATCATTAGTCATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MSSFNIDSVRIIGRCFMNFLLRIGNAFVFFIQSLYHCFIPPYYFSNVARQIIEIGFFSLPIVGLTGVFIGAVIVLQSSLS
GILINQEQVVPKLVTITIIKELGPVLISLIMVGKVGSSIAAEIGTMRITEQIDALTTLDINPFKYLIVPRILASVIVFPI
LTVCADLIGIFGGYVTAVFEFNHNLNIYIKYTAQFFNMYDFIVGLMKATAFGAIISVSSCYYGYHCREGARGVGIATTST
VVISSILIILANYLITLIHA

Sequences:

>Translated_260_residues
MSSFNIDSVRIIGRCFMNFLLRIGNAFVFFIQSLYHCFIPPYYFSNVARQIIEIGFFSLPIVGLTGVFIGAVIVLQSSLS
GILINQEQVVPKLVTITIIKELGPVLISLIMVGKVGSSIAAEIGTMRITEQIDALTTLDINPFKYLIVPRILASVIVFPI
LTVCADLIGIFGGYVTAVFEFNHNLNIYIKYTAQFFNMYDFIVGLMKATAFGAIISVSSCYYGYHCREGARGVGIATTST
VVISSILIILANYLITLIHA
>Mature_259_residues
SSFNIDSVRIIGRCFMNFLLRIGNAFVFFIQSLYHCFIPPYYFSNVARQIIEIGFFSLPIVGLTGVFIGAVIVLQSSLSG
ILINQEQVVPKLVTITIIKELGPVLISLIMVGKVGSSIAAEIGTMRITEQIDALTTLDINPFKYLIVPRILASVIVFPIL
TVCADLIGIFGGYVTAVFEFNHNLNIYIKYTAQFFNMYDFIVGLMKATAFGAIISVSSCYYGYHCREGARGVGIATTSTV
VISSILIILANYLITLIHA

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=209, Percent_Identity=32.5358851674641, Blast_Score=115, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 28566; Mature: 28435

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSFNIDSVRIIGRCFMNFLLRIGNAFVFFIQSLYHCFIPPYYFSNVARQIIEIGFFSLP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
IVGLTGVFIGAVIVLQSSLSGILINQEQVVPKLVTITIIKELGPVLISLIMVGKVGSSIA
HHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
AEIGTMRITEQIDALTTLDINPFKYLIVPRILASVIVFPILTVCADLIGIFGGYVTAVFE
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
FNHNLNIYIKYTAQFFNMYDFIVGLMKATAFGAIISVSSCYYGYHCREGARGVGIATTST
ECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
VVISSILIILANYLITLIHA
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSFNIDSVRIIGRCFMNFLLRIGNAFVFFIQSLYHCFIPPYYFSNVARQIIEIGFFSLP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
IVGLTGVFIGAVIVLQSSLSGILINQEQVVPKLVTITIIKELGPVLISLIMVGKVGSSIA
HHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
AEIGTMRITEQIDALTTLDINPFKYLIVPRILASVIVFPILTVCADLIGIFGGYVTAVFE
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
FNHNLNIYIKYTAQFFNMYDFIVGLMKATAFGAIISVSSCYYGYHCREGARGVGIATTST
ECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
VVISSILIILANYLITLIHA
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA