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The map label for this gene is yfjD [C]

Identifier: 190571149

GI number: 190571149

Start: 813378

End: 814655

Strand: Reverse

Name: yfjD [C]

Synonym: WPa_0747

Alternate gene names: 190571149

Gene position: 814655-813378 (Counterclockwise)

Preceding gene: 190571150

Following gene: 190571148

Centisome position: 54.95

GC content: 32.71

Gene sequence:

>1278_bases
ATGGATTGGTTATTGATTTCAGTATTGTCAGCAATTTTCTTCTTGTTGATCTTATCGTTTTTGTTTTCAGGAGCAGAAAT
AGGGTTAACCTCAATTAGCCGCTCCCGAGTTAATAAACTAAAGCTAGATGGCAATAAAAGAGCTAAGATAATAGAACGCT
TGTTGAATACAAAAGAATTAACAATAGGAACAATATTACTGTGCAATACAATTATTAACATTACTTGTTCCGCTTTATTT
ACAGCAATATTTATACATTTCTTTGAAAGTGAAGGCATCTTTCTTTCAACATTCATGATGACGTTTTGTATTTTGCTATT
TTGTGAAGTTTTACCAAAAACTTACGCCATGCAAAATCCTGAAAAATTTACATTGCTTTCTTCTTATTTTATGCTGTTTT
TTGTCAAGATTCTTTCTCCATTGACATTAGGCATTCAGTTTATTGTCAATCTCATTCTGAAGTTATGTGGGCTTCATAAG
AATAGGGAGGTAATATCTGCAGCAGATGCAATGCGTAACATGATTACTCTTCATCGCAGTGAAGGAACTATGTTACAACA
GGATTTAGATATGCTAAGTAGTATACTTGATTTGGCTGAGACAGAAATATCACAGATTATGACTCACAGGAGAAGCTTAT
TTTCTCTTGATATAGATCGAAACAAAGAGGATTTAATAAGAGAGATTTTAACCAGTAGCCATAGCAGAGTACCTTTATGG
CAAAAAGAACCAGATAATATTGTTGGAGTGGTTCACGTGAAAAATCTAATAAATGCCTTGCGTGAAAAGGATAATAAAAT
AGAGATTGCCAAAGTTATGTCAAAGCCTTGGTTTATACCAGAAAGTACGCCACTCAGTGTACAACTTCACAACTTCCGTA
AAAACAGGAAACACCTTGCATTTGTTATTGATGAGTATGGAGCACTACAGGGAATCGTAACTCTTGAGGATATACTGGAA
GAAATAGTTGGAGAAATTTCAGATGAACATGATTTGATCACAGAGAATTTTATAAAAAAGATATCCGATAATATGTATCA
CATAGAAGGAAAATCTACTATTAGGGATATTAATAGACAGTTACATTGGGATCTTCCTGATGAAGAAGCTACAACTCTAG
CAGGTATGATTGTAAACGAGATAGAGCGCATTCCTGAAGAAAATGAAGAGTTTTCCATGTACGGTTTTTACTTTAAGATT
TTAAAAAAAGATAAAAATATTATTACTATGATTGAAGTACAAGTAAAAACTGATAATACTGTAGTAGCAATTAATTAG

Upstream 100 bases:

>100_bases
ATGATTTATTTTTTTATATTAAAGATATATAGACTTGCAAATGCTTCTTACAACATATAAAATCAACTCTGTTTCTATAT
CGCAATAACATCATACTTTA

Downstream 100 bases:

>100_bases
TTGGGTTCTATGGAAGATACATTAAAAATAACGGCTGAAGATTTGAAGAACTATATAGAGAGAATAGAAAAACTTGAACA
AGAAAAGAGGGATGTGCAAG

Product: Putative CBS domain membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MDWLLISVLSAIFFLLILSFLFSGAEIGLTSISRSRVNKLKLDGNKRAKIIERLLNTKELTIGTILLCNTIINITCSALF
TAIFIHFFESEGIFLSTFMMTFCILLFCEVLPKTYAMQNPEKFTLLSSYFMLFFVKILSPLTLGIQFIVNLILKLCGLHK
NREVISAADAMRNMITLHRSEGTMLQQDLDMLSSILDLAETEISQIMTHRRSLFSLDIDRNKEDLIREILTSSHSRVPLW
QKEPDNIVGVVHVKNLINALREKDNKIEIAKVMSKPWFIPESTPLSVQLHNFRKNRKHLAFVIDEYGALQGIVTLEDILE
EIVGEISDEHDLITENFIKKISDNMYHIEGKSTIRDINRQLHWDLPDEEATTLAGMIVNEIERIPEENEEFSMYGFYFKI
LKKDKNIITMIEVQVKTDNTVVAIN

Sequences:

>Translated_425_residues
MDWLLISVLSAIFFLLILSFLFSGAEIGLTSISRSRVNKLKLDGNKRAKIIERLLNTKELTIGTILLCNTIINITCSALF
TAIFIHFFESEGIFLSTFMMTFCILLFCEVLPKTYAMQNPEKFTLLSSYFMLFFVKILSPLTLGIQFIVNLILKLCGLHK
NREVISAADAMRNMITLHRSEGTMLQQDLDMLSSILDLAETEISQIMTHRRSLFSLDIDRNKEDLIREILTSSHSRVPLW
QKEPDNIVGVVHVKNLINALREKDNKIEIAKVMSKPWFIPESTPLSVQLHNFRKNRKHLAFVIDEYGALQGIVTLEDILE
EIVGEISDEHDLITENFIKKISDNMYHIEGKSTIRDINRQLHWDLPDEEATTLAGMIVNEIERIPEENEEFSMYGFYFKI
LKKDKNIITMIEVQVKTDNTVVAIN
>Mature_425_residues
MDWLLISVLSAIFFLLILSFLFSGAEIGLTSISRSRVNKLKLDGNKRAKIIERLLNTKELTIGTILLCNTIINITCSALF
TAIFIHFFESEGIFLSTFMMTFCILLFCEVLPKTYAMQNPEKFTLLSSYFMLFFVKILSPLTLGIQFIVNLILKLCGLHK
NREVISAADAMRNMITLHRSEGTMLQQDLDMLSSILDLAETEISQIMTHRRSLFSLDIDRNKEDLIREILTSSHSRVPLW
QKEPDNIVGVVHVKNLINALREKDNKIEIAKVMSKPWFIPESTPLSVQLHNFRKNRKHLAFVIDEYGALQGIVTLEDILE
EIVGEISDEHDLITENFIKKISDNMYHIEGKSTIRDINRQLHWDLPDEEATTLAGMIVNEIERIPEENEEFSMYGFYFKI
LKKDKNIITMIEVQVKTDNTVVAIN

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=379, Percent_Identity=26.1213720316623, Blast_Score=136, Evalue=3e-32,
Organism=Homo sapiens, GI40068055, Length=360, Percent_Identity=26.3888888888889, Blast_Score=96, Evalue=7e-20,
Organism=Homo sapiens, GI40068053, Length=360, Percent_Identity=26.3888888888889, Blast_Score=96, Evalue=9e-20,
Organism=Homo sapiens, GI94681046, Length=344, Percent_Identity=25, Blast_Score=91, Evalue=3e-18,
Organism=Escherichia coli, GI145693175, Length=395, Percent_Identity=31.1392405063291, Blast_Score=230, Evalue=1e-61,
Organism=Escherichia coli, GI1786879, Length=230, Percent_Identity=30.8695652173913, Blast_Score=126, Evalue=3e-30,
Organism=Escherichia coli, GI87082033, Length=266, Percent_Identity=26.3157894736842, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1790664, Length=412, Percent_Identity=22.0873786407767, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1788119, Length=267, Percent_Identity=24.7191011235955, Blast_Score=86, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17539402, Length=358, Percent_Identity=25.1396648044693, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71980512, Length=348, Percent_Identity=24.7126436781609, Blast_Score=77, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6324512, Length=363, Percent_Identity=25.3443526170799, Blast_Score=98, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 48866; Mature: 48866

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWLLISVLSAIFFLLILSFLFSGAEIGLTSISRSRVNKLKLDGNKRAKIIERLLNTKEL
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCHH
TIGTILLCNTIINITCSALFTAIFIHFFESEGIFLSTFMMTFCILLFCEVLPKTYAMQNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EKFTLLSSYFMLFFVKILSPLTLGIQFIVNLILKLCGLHKNREVISAADAMRNMITLHRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
EGTMLQQDLDMLSSILDLAETEISQIMTHRRSLFSLDIDRNKEDLIREILTSSHSRVPLW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHCCCCCCCCC
QKEPDNIVGVVHVKNLINALREKDNKIEIAKVMSKPWFIPESTPLSVQLHNFRKNRKHLA
CCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCEEEEHHHHCCCCCEE
FVIDEYGALQGIVTLEDILEEIVGEISDEHDLITENFIKKISDNMYHIEGKSTIRDINRQ
EEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHH
LHWDLPDEEATTLAGMIVNEIERIPEENEEFSMYGFYFKILKKDKNIITMIEVQVKTDNT
HCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCE
VVAIN
EEEEC
>Mature Secondary Structure
MDWLLISVLSAIFFLLILSFLFSGAEIGLTSISRSRVNKLKLDGNKRAKIIERLLNTKEL
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCHH
TIGTILLCNTIINITCSALFTAIFIHFFESEGIFLSTFMMTFCILLFCEVLPKTYAMQNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EKFTLLSSYFMLFFVKILSPLTLGIQFIVNLILKLCGLHKNREVISAADAMRNMITLHRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
EGTMLQQDLDMLSSILDLAETEISQIMTHRRSLFSLDIDRNKEDLIREILTSSHSRVPLW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHCCCCCCCCC
QKEPDNIVGVVHVKNLINALREKDNKIEIAKVMSKPWFIPESTPLSVQLHNFRKNRKHLA
CCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCEEEEHHHHCCCCCEE
FVIDEYGALQGIVTLEDILEEIVGEISDEHDLITENFIKKISDNMYHIEGKSTIRDINRQ
EEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHH
LHWDLPDEEATTLAGMIVNEIERIPEENEEFSMYGFYFKILKKDKNIITMIEVQVKTDNT
HCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCE
VVAIN
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]