| Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
|---|---|
| Accession | NC_010981 |
| Length | 1,482,455 |
Click here to switch to the map view.
The map label for this gene is pheT [H]
Identifier: 190571033
GI number: 190571033
Start: 676579
End: 678918
Strand: Direct
Name: pheT [H]
Synonym: WPa_0625
Alternate gene names: 190571033
Gene position: 676579-678918 (Clockwise)
Preceding gene: 190571032
Following gene: 190571035
Centisome position: 45.64
GC content: 34.79
Gene sequence:
>2340_bases ATGAAGTTCACATTATCTTGGTTATTAGAGTACTTAGAAACCAATGCTAGTTTAGAGGAAATTACTGATAAATTAACTCA CATAGGGTTGGAAGTAGAGAATGTGATCGACAATTCCAGATTGGCCGGGTTTGTTGTTGCAGAAGTATTAGAAGTCGCAC CTCATCCAAATGCTGATAAATTAAAATTATGTAGAGTAAATGATGGAAGTAAAGTTCTGCAGATAGTCTGCGGAGCAAAA AATGTTAAAGAAGGCATGAAGACTGTACTTGCATCTCTTGGTAGCACATTGCCAGAAAGCAACTTTACAATTAAGCCTAC AAAAATAAGAGGAGTGCTAAGTGAAGGGATGCTCTGCTCTGCCTCTGAGCTTTCGCTGACTCAAGATGAAAGTGAAGGAA TAATCGAGCTTTCTGATGATTATAAAACAGGAGATAAATTTTTCAATTGCGATCCTGTAATTGACATAAACATCACTCCA AACCGTGGAGATTGCTTAGGTGTTTATGGAATAGCACGTGATCTAGCAGCAACTGGAATTGGAACGTTAAAGACTTTAAT CATTCCACAACTTACCGCTTCTATGAACTCACTAATAAACGTCAAAGTCATCGATGGGGAGAGTTTTATTAGTGGAGTAT ATATCACTAATGTAAAAAATAAAGAGAGTCCAAAATGGCTAAAAGATAAATTGGAATCGATAGGAATGCGCTCCATTTCT GCAATAGTTGATATTACTAATTACATTATGATATCTTTCGGGCGCCCGATGCACGCGTATGATGCAAAAAAAATAGAAGG AGAGCTCATAGTACGCAAAGCAAATGATGAAGAAAAATTTATTGGTTTAAATGATAAAGAGTACTTATTAAACAAAGACA TAAGCGTTATTTCTGATGATAAAAATGTTCATGGAATTGCTGGAATTATGGGCAGCAAGTATAGCGAATGTACACTTAAA ACTACTGATATCTTTTTAGAGTCTGCTTGGTTTGACCCCATCTCCATCACTAAATCTTCAAGGCAGCTAGGCATCTCCAC AGACTCAAGTTACAGATTTGCACGTTCAATTGACCCTGAATTTACCCTTGATGGACTCAATCTTGCAGCCAAAATGATTT TGGATTTATGTGGCGGAGAAGTGTCAAGCATAGTGTCTGCTGGCAATTTGAATAAGGCTGATACCAAGATAAATTTTGAT TATCAAGATGCAAACAAACTTGGAAGTGTATCTGCATCACCTAATGAGCTATTCGATATTTTAACAAAGCTAGGGTTTAG TATCGATAAAAAAACCGAAGGTAATTGGAATATACAAGTACCAAGCTGGAGACCAGACATAAAAATACCTGCTGACCTAG TTGAAGAGGCAGTAAGAATATACGGCTATGATAAAATAAAGGAAGAGCAACTAGCAGAAGACGTTACAGTAGAAGAAGAG ACACAAGATGATTTGCGCATTTTAATGACAAGCAGAGGATTTCATGAAGTGATAACTTGGTCTTTTATGAGTGAATCAAT AGCTGAAAAGTTTGGTTACTTGAATAAGTTATTCATTATCGACAATCCATTTAATAATAACTTCAATATAATGAGGCCAA GTGTCATACCAAATTTGTTGCAAGTCACTGCAGATAATATTGCTCACGGGATATCTGATCTCGCAATTTTTGAAATTGGA CCAATTTATAATGGTGAGGCTCAGTCTAAGTACGTTTTAAGTGGAATTAGATCAGGAAATAATTCGCCGAAAAACCACTA TAACACTGATAGAAAAATAGATATTTTTGACGCAAAGGCTGACCTCATAACAGCTTTGGAACTTTTTAATGTCAATTGTG ATAATTTAGCAATAGAGAGAGCAGAAAAAGAATATTATCACCCAGGAAAATCAGGCTCCTTATCTTTTAGAAGTAAAATA GTTGGTTATTTTGGAGAATTGCATCCGAGTATATTGGATTTTTTTAACATCAAACAAAAAATTGTAGGCTTTGAGTTGAT ATTAGAAAATATCGAAAATTTACCTATAAGTAGAAAAAAATTTATCGATTATAAATATCAAAGTGTAAAACGCGACTTTG CATTCATTGTAAATAAAGATGTAGCAGCAGGCAGTATAATCAATATGGTGAAAAAAAGCTCAGAGCTCATCACAGAAGTT TTGATATTTGATGTATATCATGGAAACAATATAGAATCGAATAAGATGTCTATAGCATTTTCAGTTACTTTCTGCTCTCC AACTCACACTTTAACTGAAGAGGAAATCCAAAAAGAATCAAATATGATAGTCAACTTAGTGTGTGAAAATACTGAAGGAA CTTTGAGAGCTCATCATTAA
Upstream 100 bases:
>100_bases TCTCCTTCGTTTTTTACAATTAGAGAAGCTACTCACTACAACAAGCTTTAAAATCATTATATTTTACATTACAATAACTT TTTTATTTTCTGTTAAATAA
Downstream 100 bases:
>100_bases GCCATAATCGCCGTTTCCTGATTTTGCTGTGTCACGTTTACTTCATCCAATTTATTTCCTATCTTGAATTCAATATCCTT GAAAAACCTATCCCACATTC
Product: phenylalanyl-tRNA synthetase subunit beta
Products: NA
Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]
Number of amino acids: Translated: 779; Mature: 779
Protein sequence:
>779_residues MKFTLSWLLEYLETNASLEEITDKLTHIGLEVENVIDNSRLAGFVVAEVLEVAPHPNADKLKLCRVNDGSKVLQIVCGAK NVKEGMKTVLASLGSTLPESNFTIKPTKIRGVLSEGMLCSASELSLTQDESEGIIELSDDYKTGDKFFNCDPVIDINITP NRGDCLGVYGIARDLAATGIGTLKTLIIPQLTASMNSLINVKVIDGESFISGVYITNVKNKESPKWLKDKLESIGMRSIS AIVDITNYIMISFGRPMHAYDAKKIEGELIVRKANDEEKFIGLNDKEYLLNKDISVISDDKNVHGIAGIMGSKYSECTLK TTDIFLESAWFDPISITKSSRQLGISTDSSYRFARSIDPEFTLDGLNLAAKMILDLCGGEVSSIVSAGNLNKADTKINFD YQDANKLGSVSASPNELFDILTKLGFSIDKKTEGNWNIQVPSWRPDIKIPADLVEEAVRIYGYDKIKEEQLAEDVTVEEE TQDDLRILMTSRGFHEVITWSFMSESIAEKFGYLNKLFIIDNPFNNNFNIMRPSVIPNLLQVTADNIAHGISDLAIFEIG PIYNGEAQSKYVLSGIRSGNNSPKNHYNTDRKIDIFDAKADLITALELFNVNCDNLAIERAEKEYYHPGKSGSLSFRSKI VGYFGELHPSILDFFNIKQKIVGFELILENIENLPISRKKFIDYKYQSVKRDFAFIVNKDVAAGSIINMVKKSSELITEV LIFDVYHGNNIESNKMSIAFSVTFCSPTHTLTEEEIQKESNMIVNLVCENTEGTLRAHH
Sequences:
>Translated_779_residues MKFTLSWLLEYLETNASLEEITDKLTHIGLEVENVIDNSRLAGFVVAEVLEVAPHPNADKLKLCRVNDGSKVLQIVCGAK NVKEGMKTVLASLGSTLPESNFTIKPTKIRGVLSEGMLCSASELSLTQDESEGIIELSDDYKTGDKFFNCDPVIDINITP NRGDCLGVYGIARDLAATGIGTLKTLIIPQLTASMNSLINVKVIDGESFISGVYITNVKNKESPKWLKDKLESIGMRSIS AIVDITNYIMISFGRPMHAYDAKKIEGELIVRKANDEEKFIGLNDKEYLLNKDISVISDDKNVHGIAGIMGSKYSECTLK TTDIFLESAWFDPISITKSSRQLGISTDSSYRFARSIDPEFTLDGLNLAAKMILDLCGGEVSSIVSAGNLNKADTKINFD YQDANKLGSVSASPNELFDILTKLGFSIDKKTEGNWNIQVPSWRPDIKIPADLVEEAVRIYGYDKIKEEQLAEDVTVEEE TQDDLRILMTSRGFHEVITWSFMSESIAEKFGYLNKLFIIDNPFNNNFNIMRPSVIPNLLQVTADNIAHGISDLAIFEIG PIYNGEAQSKYVLSGIRSGNNSPKNHYNTDRKIDIFDAKADLITALELFNVNCDNLAIERAEKEYYHPGKSGSLSFRSKI VGYFGELHPSILDFFNIKQKIVGFELILENIENLPISRKKFIDYKYQSVKRDFAFIVNKDVAAGSIINMVKKSSELITEV LIFDVYHGNNIESNKMSIAFSVTFCSPTHTLTEEEIQKESNMIVNLVCENTEGTLRAHH >Mature_779_residues MKFTLSWLLEYLETNASLEEITDKLTHIGLEVENVIDNSRLAGFVVAEVLEVAPHPNADKLKLCRVNDGSKVLQIVCGAK NVKEGMKTVLASLGSTLPESNFTIKPTKIRGVLSEGMLCSASELSLTQDESEGIIELSDDYKTGDKFFNCDPVIDINITP NRGDCLGVYGIARDLAATGIGTLKTLIIPQLTASMNSLINVKVIDGESFISGVYITNVKNKESPKWLKDKLESIGMRSIS AIVDITNYIMISFGRPMHAYDAKKIEGELIVRKANDEEKFIGLNDKEYLLNKDISVISDDKNVHGIAGIMGSKYSECTLK TTDIFLESAWFDPISITKSSRQLGISTDSSYRFARSIDPEFTLDGLNLAAKMILDLCGGEVSSIVSAGNLNKADTKINFD YQDANKLGSVSASPNELFDILTKLGFSIDKKTEGNWNIQVPSWRPDIKIPADLVEEAVRIYGYDKIKEEQLAEDVTVEEE TQDDLRILMTSRGFHEVITWSFMSESIAEKFGYLNKLFIIDNPFNNNFNIMRPSVIPNLLQVTADNIAHGISDLAIFEIG PIYNGEAQSKYVLSGIRSGNNSPKNHYNTDRKIDIFDAKADLITALELFNVNCDNLAIERAEKEYYHPGKSGSLSFRSKI VGYFGELHPSILDFFNIKQKIVGFELILENIENLPISRKKFIDYKYQSVKRDFAFIVNKDVAAGSIINMVKKSSELITEV LIFDVYHGNNIESNKMSIAFSVTFCSPTHTLTEEEIQKESNMIVNLVCENTEGTLRAHH
Specific function: Unknown
COG id: COG0072
COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain [H]
Homologues:
Organism=Homo sapiens, GI124028525, Length=554, Percent_Identity=23.2851985559567, Blast_Score=84, Evalue=6e-16, Organism=Escherichia coli, GI1788006, Length=811, Percent_Identity=32.4290998766954, Blast_Score=408, Evalue=1e-115,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005146 - InterPro: IPR005147 - InterPro: IPR009061 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR004532 - InterPro: IPR020825 - InterPro: IPR005121 - InterPro: IPR002547 [H]
Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind [H]
EC number: =6.1.1.20 [H]
Molecular weight: Translated: 86780; Mature: 86780
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS50886 TRBD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFTLSWLLEYLETNASLEEITDKLTHIGLEVENVIDNSRLAGFVVAEVLEVAPHPNADK CEEEHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCC LKLCRVNDGSKVLQIVCGAKNVKEGMKTVLASLGSTLPESNFTIKPTKIRGVLSEGMLCS EEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHCCCEEC ASELSLTQDESEGIIELSDDYKTGDKFFNCDPVIDINITPNRGDCLGVYGIARDLAATGI CCCCCCCCCCCCCEEEECCCCCCCCCEECCCCEEEEEECCCCCCEEEHHHHHHHHHHHCH GTLKTLIIPQLTASMNSLINVKVIDGESFISGVYITNVKNKESPKWLKDKLESIGMRSIS HHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHCCHHHHH AIVDITNYIMISFGRPMHAYDAKKIEGELIVRKANDEEKFIGLNDKEYLLNKDISVISDD HHHHHHHEEEEECCCCCCCCCCHHCCCEEEEEECCCCCCEECCCCCHHHHCCCCEEEECC KNVHGIAGIMGSKYSECTLKTTDIFLESAWFDPISITKSSRQLGISTDSSYRFARSIDPE CCCCCHHHHHCCCCCCEEEEHHHHEEECCCCCCEEEECCCCEECCCCCCCCEEHCCCCCC FTLDGLNLAAKMILDLCGGEVSSIVSAGNLNKADTKINFDYQDANKLGSVSASPNELFDI EEECHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEECCCCCHHHCCCCCCCHHHHHHH LTKLGFSIDKKTEGNWNIQVPSWRPDIKIPADLVEEAVRIYGYDKIKEEQLAEDVTVEEE HHHHCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC TQDDLRILMTSRGFHEVITWSFMSESIAEKFGYLNKLFIIDNPFNNNFNIMRPSVIPNLL CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEECHHHHHHHH QVTADNIAHGISDLAIFEIGPIYNGEAQSKYVLSGIRSGNNSPKNHYNTDRKIDIFDAKA HHHHHHHHHCHHHEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEECHH DLITALELFNVNCDNLAIERAEKEYYHPGKSGSLSFRSKIVGYFGELHPSILDFFNIKQK HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHH IVGFELILENIENLPISRKKFIDYKYQSVKRDFAFIVNKDVAAGSIINMVKKSSELITEV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHH LIFDVYHGNNIESNKMSIAFSVTFCSPTHTLTEEEIQKESNMIVNLVCENTEGTLRAHH HHEEEECCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHCCCEEEEEEEECCCCCEEECC >Mature Secondary Structure MKFTLSWLLEYLETNASLEEITDKLTHIGLEVENVIDNSRLAGFVVAEVLEVAPHPNADK CEEEHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCC LKLCRVNDGSKVLQIVCGAKNVKEGMKTVLASLGSTLPESNFTIKPTKIRGVLSEGMLCS EEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHCCCEEC ASELSLTQDESEGIIELSDDYKTGDKFFNCDPVIDINITPNRGDCLGVYGIARDLAATGI CCCCCCCCCCCCCEEEECCCCCCCCCEECCCCEEEEEECCCCCCEEEHHHHHHHHHHHCH GTLKTLIIPQLTASMNSLINVKVIDGESFISGVYITNVKNKESPKWLKDKLESIGMRSIS HHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHCCHHHHH AIVDITNYIMISFGRPMHAYDAKKIEGELIVRKANDEEKFIGLNDKEYLLNKDISVISDD HHHHHHHEEEEECCCCCCCCCCHHCCCEEEEEECCCCCCEECCCCCHHHHCCCCEEEECC KNVHGIAGIMGSKYSECTLKTTDIFLESAWFDPISITKSSRQLGISTDSSYRFARSIDPE CCCCCHHHHHCCCCCCEEEEHHHHEEECCCCCCEEEECCCCEECCCCCCCCEEHCCCCCC FTLDGLNLAAKMILDLCGGEVSSIVSAGNLNKADTKINFDYQDANKLGSVSASPNELFDI EEECHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEECCCCCHHHCCCCCCCHHHHHHH LTKLGFSIDKKTEGNWNIQVPSWRPDIKIPADLVEEAVRIYGYDKIKEEQLAEDVTVEEE HHHHCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC TQDDLRILMTSRGFHEVITWSFMSESIAEKFGYLNKLFIIDNPFNNNFNIMRPSVIPNLL CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEECHHHHHHHH QVTADNIAHGISDLAIFEIGPIYNGEAQSKYVLSGIRSGNNSPKNHYNTDRKIDIFDAKA HHHHHHHHHCHHHEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEECHH DLITALELFNVNCDNLAIERAEKEYYHPGKSGSLSFRSKIVGYFGELHPSILDFFNIKQK HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHH IVGFELILENIENLPISRKKFIDYKYQSVKRDFAFIVNKDVAAGSIINMVKKSSELITEV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHH LIFDVYHGNNIESNKMSIAFSVTFCSPTHTLTEEEIQKESNMIVNLVCENTEGTLRAHH HHEEEECCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHCCCEEEEEEEECCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA