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The map label for this gene is bepC [H]

Identifier: 190571017

GI number: 190571017

Start: 662165

End: 663400

Strand: Reverse

Name: bepC [H]

Synonym: WPa_0609

Alternate gene names: 190571017

Gene position: 663400-662165 (Counterclockwise)

Preceding gene: 190571021

Following gene: 190571016

Centisome position: 44.75

GC content: 32.77

Gene sequence:

>1236_bases
ATGTTTCGATTGATTATTATACTTATAATTGCTTTTGGTACTATAGGTTGCTATGCAATCGATTTGGAAGAAGCCATAAG
CAAAGCTATCAAAAACAGCTCAAAAATAAAGTCTCAGTTTTACCAATATAAGAGTGCTGAAAAACAGCTGAAATCTTCTG
GATTGGCTGGATTTTTACCTGACATTAATTTACAATATAATTTCGATAGTAATTTTAATATTATTAACGATCGACAAAAC
TCTGGAAAGCGTCTAACATTAAGCCAAAGAATAATAGACGGTGGGGGCACTTTTGCTACATTTAGCCGATCAAGTCATCT
TCTTAAAGCAGCAAAAATTAGATTTCAGCAGTCAAAGCAAGAAGTTGCACTCAGCGCTGTGAAAGCATATGTTAATGTTT
TACAAAAGGCAGAAATATTAAAACTGAGAGAACATAAAGAACGTGTTTCTTTAGAACATTTGTCAGCTATGAAAAAACGC
TTTTCTCTTGGAGAAGTTACTAATGCTGAGGTTTTATTCGCAAAAGCAAAATTTTCATCTTCTATATCCAAAAGAGTTGA
TGCTGAAGGTGAATTAAAGCTCGCTAATATTGCTTACTATCATTTAATTGGTGAAGATGCTGATAATCTTCACGAGACTA
ATGGTAAACTACCTTCTATACCAGAATTAAATGAATGTTTACAATTAGCAAAAACTAATAACTTGTCCCTAAAAGCAGCA
GTTTATCAAAAAAGAGCTGCTGGAATGGAAGTGATTGCTGAAAGTTCCAAGTGGCTTCCTTCTTTGAATCTAAGCGCAAG
TAAAAATTTTGGAAAGGACAATATAAAATTGGACACGTTACTAGAAAATGTGAATGTTGTCTTTACTCTTGATATTCCGA
TCTTTAAAAGAGGAGTTAATGTTTTTGGTGTTAGTAGAGCTAAAATGGATGCAAAACAATCCACTTACGATTATTACGAA
GCAGTAAAAAATATAGAACAAGCAGTTATAAATGCTTGGAATAACGTGCTGACAGCAAAAGCTATTATTAAAGCAAGTCA
AGAAGCAGAAAAAGCAGCAGCTTTAGCATTGGAAGGAGTTGCGCAAGAAGTAAACTTAAATTTAAAGAGCACAATTGATC
TTTTGGATACTGAAGATGAACTATTTAAAGCACGTTCCGATCTAATTCAGGCAAAAAGCAATTATGTAATTAGTGTTTAC
AACTTGCTTTTTATGATAAATAGTATAAACCTTTAA

Upstream 100 bases:

>100_bases
CTGAGTTGCTTGATAGTGTCAACAACATTAGTTACAACATTAGTTATTGATTATTAAAGTAATTTATGCTAATAACTTAA
ACAACATGCTAGAAAGCAAA

Downstream 100 bases:

>100_bases
ATTTAATGGTATGAGCGATAATCAATCTGTAAAAGATATACTAGAAGATATAAAAAAAGCTATATCGGGTAAAAATCCAA
GTGGTGATAGAGCAGAAATA

Product: putative outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MFRLIIILIIAFGTIGCYAIDLEEAISKAIKNSSKIKSQFYQYKSAEKQLKSSGLAGFLPDINLQYNFDSNFNIINDRQN
SGKRLTLSQRIIDGGGTFATFSRSSHLLKAAKIRFQQSKQEVALSAVKAYVNVLQKAEILKLREHKERVSLEHLSAMKKR
FSLGEVTNAEVLFAKAKFSSSISKRVDAEGELKLANIAYYHLIGEDADNLHETNGKLPSIPELNECLQLAKTNNLSLKAA
VYQKRAAGMEVIAESSKWLPSLNLSASKNFGKDNIKLDTLLENVNVVFTLDIPIFKRGVNVFGVSRAKMDAKQSTYDYYE
AVKNIEQAVINAWNNVLTAKAIIKASQEAEKAAALALEGVAQEVNLNLKSTIDLLDTEDELFKARSDLIQAKSNYVISVY
NLLFMINSINL

Sequences:

>Translated_411_residues
MFRLIIILIIAFGTIGCYAIDLEEAISKAIKNSSKIKSQFYQYKSAEKQLKSSGLAGFLPDINLQYNFDSNFNIINDRQN
SGKRLTLSQRIIDGGGTFATFSRSSHLLKAAKIRFQQSKQEVALSAVKAYVNVLQKAEILKLREHKERVSLEHLSAMKKR
FSLGEVTNAEVLFAKAKFSSSISKRVDAEGELKLANIAYYHLIGEDADNLHETNGKLPSIPELNECLQLAKTNNLSLKAA
VYQKRAAGMEVIAESSKWLPSLNLSASKNFGKDNIKLDTLLENVNVVFTLDIPIFKRGVNVFGVSRAKMDAKQSTYDYYE
AVKNIEQAVINAWNNVLTAKAIIKASQEAEKAAALALEGVAQEVNLNLKSTIDLLDTEDELFKARSDLIQAKSNYVISVY
NLLFMINSINL
>Mature_411_residues
MFRLIIILIIAFGTIGCYAIDLEEAISKAIKNSSKIKSQFYQYKSAEKQLKSSGLAGFLPDINLQYNFDSNFNIINDRQN
SGKRLTLSQRIIDGGGTFATFSRSSHLLKAAKIRFQQSKQEVALSAVKAYVNVLQKAEILKLREHKERVSLEHLSAMKKR
FSLGEVTNAEVLFAKAKFSSSISKRVDAEGELKLANIAYYHLIGEDADNLHETNGKLPSIPELNECLQLAKTNNLSLKAA
VYQKRAAGMEVIAESSKWLPSLNLSASKNFGKDNIKLDTLLENVNVVFTLDIPIFKRGVNVFGVSRAKMDAKQSTYDYYE
AVKNIEQAVINAWNNVLTAKAIIKASQEAEKAAALALEGVAQEVNLNLKSTIDLLDTEDELFKARSDLIQAKSNYVISVY
NLLFMINSINL

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=376, Percent_Identity=23.4042553191489, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 45731; Mature: 45731

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRLIIILIIAFGTIGCYAIDLEEAISKAIKNSSKIKSQFYQYKSAEKQLKSSGLAGFLP
CHHHHHHHHHHHHHHCEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCEECCC
DINLQYNFDSNFNIINDRQNSGKRLTLSQRIIDGGGTFATFSRSSHLLKAAKIRFQQSKQ
CCEEEEECCCCCCEECCCCCCCCEEEEHHHEECCCCCEEEECCCHHHHHHHHHHHHHHHH
EVALSAVKAYVNVLQKAEILKLREHKERVSLEHLSAMKKRFSLGEVTNAEVLFAKAKFSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHH
SISKRVDAEGELKLANIAYYHLIGEDADNLHETNGKLPSIPELNECLQLAKTNNLSLKAA
HHHHHCCCCCCEEEEEEEEEEEECCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEHHH
VYQKRAAGMEVIAESSKWLPSLNLSASKNFGKDNIKLDTLLENVNVVFTLDIPIFKRGVN
HHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEECCHHHHCCCC
VFGVSRAKMDAKQSTYDYYEAVKNIEQAVINAWNNVLTAKAIIKASQEAEKAAALALEGV
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQEVNLNLKSTIDLLDTEDELFKARSDLIQAKSNYVISVYNLLFMINSINL
HHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCC
>Mature Secondary Structure
MFRLIIILIIAFGTIGCYAIDLEEAISKAIKNSSKIKSQFYQYKSAEKQLKSSGLAGFLP
CHHHHHHHHHHHHHHCEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCEECCC
DINLQYNFDSNFNIINDRQNSGKRLTLSQRIIDGGGTFATFSRSSHLLKAAKIRFQQSKQ
CCEEEEECCCCCCEECCCCCCCCEEEEHHHEECCCCCEEEECCCHHHHHHHHHHHHHHHH
EVALSAVKAYVNVLQKAEILKLREHKERVSLEHLSAMKKRFSLGEVTNAEVLFAKAKFSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHH
SISKRVDAEGELKLANIAYYHLIGEDADNLHETNGKLPSIPELNECLQLAKTNNLSLKAA
HHHHHCCCCCCEEEEEEEEEEEECCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEHHH
VYQKRAAGMEVIAESSKWLPSLNLSASKNFGKDNIKLDTLLENVNVVFTLDIPIFKRGVN
HHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEECCHHHHCCCC
VFGVSRAKMDAKQSTYDYYEAVKNIEQAVINAWNNVLTAKAIIKASQEAEKAAALALEGV
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQEVNLNLKSTIDLLDTEDELFKARSDLIQAKSNYVISVYNLLFMINSINL
HHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]