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The map label for this gene is lysK [H]

Identifier: 190571013

GI number: 190571013

Start: 657918

End: 659495

Strand: Direct

Name: lysK [H]

Synonym: WPa_0605

Alternate gene names: 190571013

Gene position: 657918-659495 (Clockwise)

Preceding gene: 190571004

Following gene: 190571018

Centisome position: 44.38

GC content: 36.12

Gene sequence:

>1578_bases
ATGAATAGCACTTTAGGTAAGATAATTAATTTAAATTCAATGATTATAAGCTGGCCATTTCAAGAAGCAGAAAAAATACT
ACAAGAATTCCCTAATAAAAAAGAGATAATATTTGAGACTGGTTATGGTCCCTCGGGTTTACCACATATTGGTACTTTTG
GGGAAGTTTTTCGTACCACAGTTATTGCAAACGCTCTAAAAAAAATAGCTCCTAGTATAAAAACCAAAATCATTGCAGTT
TCCGACGATATGGATGGTTTGCGAAAAATACCAGATAATGTACCAAATCAGGAAATGCTAAGAGAGAATCTGAACAAGCC
ATTAACCATGATACCTGACCCATTTGGCACTCATGAGAGTTATGGTCATCACATGAATTCGTTGTTGTGTAAATTTCTTG
ATTTGTTTGGATTTGAATACGAATTTAGGAGTGCAACAGAGTGTTATAAATCTGGCGTTTACGATGAAAAACTTTTACTC
CTGCTGAAAAATTATGATAAAGTGATGGACGTAATGCTTCCATCATTTCGGGAAGAAAGGCAGCAAACCTATAGTCCATT
CTTGCCGATATGCCCAAAAACTTCCCAAGTTTTACAAGTTCCAGTAATTGAAACAAATACAGATAAAGGAACAATCACGT
ATGAAGACCCAAACGGGGGAAAAATAGAAGTTCCAGTGACAAAAGGAAAATGTAAACTGCAATGGAAACCTGATTGGGGG
ATGAGGTGGTCTGCATTCGGAGTTAATTACGAAGCTCATGGAAAGGATTTGACTCCATCTGCTGTGCTTTCAAGTCAAAT
ATGTAAAATACTTGGAGAAAAGCCACCGCTTTTGTTTTGCTATGAGTTATTTCTTGATAAAGAAGGAAAGAAGATATCAA
AATCAAAAGGAAATGGTATTTCAATTGAGGAGTGGCTAACTTATGCACCCACAGAGAGTTTAGCGTTATACATCTTTCAG
AGTCCTAAAAAAGCTAAACGTTTATATTTTGATGTGATACCAAAATCAACTGATGAATATTTAGAGTTTGCTAAGCGTTA
CAATGAGAGTGAAGAAAAGGATGTAAATAGCCCTGTATGGCACATCCACCAGGGTAAAGTTCCAAGCGTAGAAACTTCAG
GCATAAATTTTTCGTTACTTTTAAACCTGGCAGCAGCTTGTAATGCTGAAAATAAAGAGATTCTTTGGGGTTTTATATCA
ACTTATGCACCAAACGTTACACCAGAAAGCAACAAAATGCTAGATAGGCTTTCGGATTTTGCAGTTAGGTATTATCACGA
CTTTATTAAGCCAACAAAAGCGTATAAAGCTTCAAACGAAAAAGAGAAAGAAGCGTTACTAGATTTAAAGAACAACCTAC
ATTCCCTGCCTATTACAGCCACTGCTGAAGAGATTCAATCTCAGGTTTTCTCCATCGGAAAAAAACATAATTACAATAAC
TTACGCGATTGGTTTCAGTTGCTATATGAAACGCTGCTTGGCCAAAAAACCGGTCCTAGAATGGGATCTTTTATAAAGCT
TTATGGGATAGATAATACAATCTCTCTTATAGAAAGTGCTACTGAACGTACACTTTAG

Upstream 100 bases:

>100_bases
AAATAATTGATTCGTTTGTATGCTGCCAGTAGACATATCTTTAACCTTCTAATAAGAGCTCTAACACTAATACTACATCA
TTAATTAAAAATCTATTGAA

Downstream 100 bases:

>100_bases
AGTTTACCTTCTTTCATTTGAGCCCTCTAGTTTTATTACTTGACAAACCTTCCCACTTTCCTTATTATACTGATAGAGGT
ATTTATCCTTGTTTTTGGGC

Product: lysyl-tRNA synthetase

Products: NA

Alternate protein names: Lysine--tRNA ligase; LysRS [H]

Number of amino acids: Translated: 525; Mature: 525

Protein sequence:

>525_residues
MNSTLGKIINLNSMIISWPFQEAEKILQEFPNKKEIIFETGYGPSGLPHIGTFGEVFRTTVIANALKKIAPSIKTKIIAV
SDDMDGLRKIPDNVPNQEMLRENLNKPLTMIPDPFGTHESYGHHMNSLLCKFLDLFGFEYEFRSATECYKSGVYDEKLLL
LLKNYDKVMDVMLPSFREERQQTYSPFLPICPKTSQVLQVPVIETNTDKGTITYEDPNGGKIEVPVTKGKCKLQWKPDWG
MRWSAFGVNYEAHGKDLTPSAVLSSQICKILGEKPPLLFCYELFLDKEGKKISKSKGNGISIEEWLTYAPTESLALYIFQ
SPKKAKRLYFDVIPKSTDEYLEFAKRYNESEEKDVNSPVWHIHQGKVPSVETSGINFSLLLNLAAACNAENKEILWGFIS
TYAPNVTPESNKMLDRLSDFAVRYYHDFIKPTKAYKASNEKEKEALLDLKNNLHSLPITATAEEIQSQVFSIGKKHNYNN
LRDWFQLLYETLLGQKTGPRMGSFIKLYGIDNTISLIESATERTL

Sequences:

>Translated_525_residues
MNSTLGKIINLNSMIISWPFQEAEKILQEFPNKKEIIFETGYGPSGLPHIGTFGEVFRTTVIANALKKIAPSIKTKIIAV
SDDMDGLRKIPDNVPNQEMLRENLNKPLTMIPDPFGTHESYGHHMNSLLCKFLDLFGFEYEFRSATECYKSGVYDEKLLL
LLKNYDKVMDVMLPSFREERQQTYSPFLPICPKTSQVLQVPVIETNTDKGTITYEDPNGGKIEVPVTKGKCKLQWKPDWG
MRWSAFGVNYEAHGKDLTPSAVLSSQICKILGEKPPLLFCYELFLDKEGKKISKSKGNGISIEEWLTYAPTESLALYIFQ
SPKKAKRLYFDVIPKSTDEYLEFAKRYNESEEKDVNSPVWHIHQGKVPSVETSGINFSLLLNLAAACNAENKEILWGFIS
TYAPNVTPESNKMLDRLSDFAVRYYHDFIKPTKAYKASNEKEKEALLDLKNNLHSLPITATAEEIQSQVFSIGKKHNYNN
LRDWFQLLYETLLGQKTGPRMGSFIKLYGIDNTISLIESATERTL
>Mature_525_residues
MNSTLGKIINLNSMIISWPFQEAEKILQEFPNKKEIIFETGYGPSGLPHIGTFGEVFRTTVIANALKKIAPSIKTKIIAV
SDDMDGLRKIPDNVPNQEMLRENLNKPLTMIPDPFGTHESYGHHMNSLLCKFLDLFGFEYEFRSATECYKSGVYDEKLLL
LLKNYDKVMDVMLPSFREERQQTYSPFLPICPKTSQVLQVPVIETNTDKGTITYEDPNGGKIEVPVTKGKCKLQWKPDWG
MRWSAFGVNYEAHGKDLTPSAVLSSQICKILGEKPPLLFCYELFLDKEGKKISKSKGNGISIEEWLTYAPTESLALYIFQ
SPKKAKRLYFDVIPKSTDEYLEFAKRYNESEEKDVNSPVWHIHQGKVPSVETSGINFSLLLNLAAACNAENKEILWGFIS
TYAPNVTPESNKMLDRLSDFAVRYYHDFIKPTKAYKASNEKEKEALLDLKNNLHSLPITATAEEIQSQVFSIGKKHNYNN
LRDWFQLLYETLLGQKTGPRMGSFIKLYGIDNTISLIESATERTL

Specific function: Unknown

COG id: COG1384

COG function: function code J; Lysyl-tRNA synthetase (class I)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008925
- InterPro:   IPR020751
- InterPro:   IPR001412
- InterPro:   IPR002904
- InterPro:   IPR020754
- InterPro:   IPR020756
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01921 tRNA-synt_1f [H]

EC number: =6.1.1.6 [H]

Molecular weight: Translated: 59730; Mature: 59730

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSTLGKIINLNSMIISWPFQEAEKILQEFPNKKEIIFETGYGPSGLPHIGTFGEVFRTT
CCCCHHHHEECCCEEEECCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH
VIANALKKIAPSIKTKIIAVSDDMDGLRKIPDNVPNQEMLRENLNKPLTMIPDPFGTHES
HHHHHHHHHCCHHHEEEEEECCCHHHHHHCCCCCCCHHHHHHHCCCCEEECCCCCCCCHH
YGHHMNSLLCKFLDLFGFEYEFRSATECYKSGVYDEKLLLLLKNYDKVMDVMLPSFREER
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QQTYSPFLPICPKTSQVLQVPVIETNTDKGTITYEDPNGGKIEVPVTKGKCKLQWKPDWG
HHHCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCEEEEEEECCEEEEEECCCCC
MRWSAFGVNYEAHGKDLTPSAVLSSQICKILGEKPPLLFCYELFLDKEGKKISKSKGNGI
CEEEEEECCEECCCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHCCCCCCHHCCCCCCC
SIEEWLTYAPTESLALYIFQSPKKAKRLYFDVIPKSTDEYLEFAKRYNESEEKDVNSPVW
CHHHHHHCCCCCCEEEEEECCCHHHHHHEEEECCCCHHHHHHHHHHCCCCHHHCCCCCEE
HIHQGKVPSVETSGINFSLLLNLAAACNAENKEILWGFISTYAPNVTPESNKMLDRLSDF
EEECCCCCCCEECCCCHHHHHHHHHHCCCCCCHHHHEEHHHHCCCCCCCHHHHHHHHHHH
AVRYYHDFIKPTKAYKASNEKEKEALLDLKNNLHSLPITATAEEIQSQVFSIGKKHNYNN
HHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHCCCCCCH
LRDWFQLLYETLLGQKTGPRMGSFIKLYGIDNTISLIESATERTL
HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSTLGKIINLNSMIISWPFQEAEKILQEFPNKKEIIFETGYGPSGLPHIGTFGEVFRTT
CCCCHHHHEECCCEEEECCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH
VIANALKKIAPSIKTKIIAVSDDMDGLRKIPDNVPNQEMLRENLNKPLTMIPDPFGTHES
HHHHHHHHHCCHHHEEEEEECCCHHHHHHCCCCCCCHHHHHHHCCCCEEECCCCCCCCHH
YGHHMNSLLCKFLDLFGFEYEFRSATECYKSGVYDEKLLLLLKNYDKVMDVMLPSFREER
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QQTYSPFLPICPKTSQVLQVPVIETNTDKGTITYEDPNGGKIEVPVTKGKCKLQWKPDWG
HHHCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCEEEEEEECCEEEEEECCCCC
MRWSAFGVNYEAHGKDLTPSAVLSSQICKILGEKPPLLFCYELFLDKEGKKISKSKGNGI
CEEEEEECCEECCCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHCCCCCCHHCCCCCCC
SIEEWLTYAPTESLALYIFQSPKKAKRLYFDVIPKSTDEYLEFAKRYNESEEKDVNSPVW
CHHHHHHCCCCCCEEEEEECCCHHHHHHEEEECCCCHHHHHHHHHHCCCCHHHCCCCCEE
HIHQGKVPSVETSGINFSLLLNLAAACNAENKEILWGFISTYAPNVTPESNKMLDRLSDF
EEECCCCCCCEECCCCHHHHHHHHHHCCCCCCHHHHEEHHHHCCCCCCCHHHHHHHHHHH
AVRYYHDFIKPTKAYKASNEKEKEALLDLKNNLHSLPITATAEEIQSQVFSIGKKHNYNN
HHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHCCCCCCH
LRDWFQLLYETLLGQKTGPRMGSFIKLYGIDNTISLIESATERTL
HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA