Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
---|---|
Accession | NC_010981 |
Length | 1,482,455 |
Click here to switch to the map view.
The map label for this gene is 190570924
Identifier: 190570924
GI number: 190570924
Start: 541910
End: 542326
Strand: Direct
Name: 190570924
Synonym: WPa_0504
Alternate gene names: NA
Gene position: 541910-542326 (Clockwise)
Preceding gene: 190570922
Following gene: 190570926
Centisome position: 36.55
GC content: 28.78
Gene sequence:
>417_bases ATGAATAAATTACCAAGCAATGCAAAAACAAGCAAGTCTCAGGTTACTCAGTGGGAGGTAATAAAAAATTGTGAATATTC TGATAATTGTTTATCAAAAGTAGTAACTTTATACGTCATTAAAATGGCAGAATTATCAGATATTTATACGAGTAATGAAC CTGAAATTAATACTATACTTACAAGAATAAGCATAACAAGTGAAAATGCATTTTTAAATAAGGTTGTTGATATTGAAATT ATGGAGGGCATTTTTCCGTACAAATTCAACAGCAAGAAGAAAAATAACATATCAAGGCTAGAAGATTTGTACAATTATTT ATGTTCTACTGTTATTGATAGCCTTCCAAAAGAAATGCTTGAAAGCCTAAGAAGAGAATACAGAGACGCTGTTAACTTAT TTAAAGCAATTACTTAA
Upstream 100 bases:
>100_bases AATTTATGGTAAATAAATGCATATTTTTATGGCTGCGTTATTATTTATTTAACAAAGTATTAGTATAATTTACTACACTG AATTAAATGGAGAAAATTCA
Downstream 100 bases:
>100_bases CTAGGTGTAACATTTTTAAGACTTTACCTTCTATTTCAGAAATGCCACTTTCAAGATCTTTATCTATCAAACATATGGTA GATAAATATGTTTTCTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MNKLPSNAKTSKSQVTQWEVIKNCEYSDNCLSKVVTLYVIKMAELSDIYTSNEPEINTILTRISITSENAFLNKVVDIEI MEGIFPYKFNSKKKNNISRLEDLYNYLCSTVIDSLPKEMLESLRREYRDAVNLFKAIT
Sequences:
>Translated_138_residues MNKLPSNAKTSKSQVTQWEVIKNCEYSDNCLSKVVTLYVIKMAELSDIYTSNEPEINTILTRISITSENAFLNKVVDIEI MEGIFPYKFNSKKKNNISRLEDLYNYLCSTVIDSLPKEMLESLRREYRDAVNLFKAIT >Mature_138_residues MNKLPSNAKTSKSQVTQWEVIKNCEYSDNCLSKVVTLYVIKMAELSDIYTSNEPEINTILTRISITSENAFLNKVVDIEI MEGIFPYKFNSKKKNNISRLEDLYNYLCSTVIDSLPKEMLESLRREYRDAVNLFKAIT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15961; Mature: 15961
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLPSNAKTSKSQVTQWEVIKNCEYSDNCLSKVVTLYVIKMAELSDIYTSNEPEINTIL CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH TRISITSENAFLNKVVDIEIMEGIFPYKFNSKKKNNISRLEDLYNYLCSTVIDSLPKEML HHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ESLRREYRDAVNLFKAIT HHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNKLPSNAKTSKSQVTQWEVIKNCEYSDNCLSKVVTLYVIKMAELSDIYTSNEPEINTIL CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH TRISITSENAFLNKVVDIEIMEGIFPYKFNSKKKNNISRLEDLYNYLCSTVIDSLPKEML HHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ESLRREYRDAVNLFKAIT HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA