Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is 190570909
Identifier: 190570909
GI number: 190570909
Start: 524971
End: 526011
Strand: Direct
Name: 190570909
Synonym: WPa_0489
Alternate gene names: NA
Gene position: 524971-526011 (Clockwise)
Preceding gene: 190570908
Following gene: 190570910
Centisome position: 35.41
GC content: 32.95
Gene sequence:
>1041_bases ATGTCAAAAAACACCTATAGTGACCAAATTAATAATAGTTATTTATATAACAACAAACTTTTTTATGGTGAAGAGGATAT AGATGAGATCACTGAAGGTGAAACTACGACTGAGAAGGAATTTACAAATAGTTCCGTAGTAAAAGAGGATTTTGAACTAG TAGAAAAGAAGCTTACGAAATGTGAAGAGGAAGTTAAGCGAGCAAAAGCAGAGACTGAGTGGTATAAAAAAATAGCTGAA GAATGTAAAAAAGGAAGTGGTACGGGCGAACCTGTTACCGATGAAGGAGAGAATGAAAATGGAGAAATTACATCTCGAAA AGTAACCTCAGATTGTTCCAAGTATGAAAATTGTGGGCCGTATTCTCATTTTTATAAAGTTGATAATAAGATAGGTTGTC AAGGTTTTAGTTCATCTGATTTACTAAAGGAATTATATCCTGAGATGTACAGTAATCCTAAGATTGCAAAATATATAGAA GAGGGAGCAAATGGTAATTATGGTGCAGTAAATTTTAAATTTGCCTTTACAGAGGATCTTAATTCAATATCCTGGCTTGG TAATATAGAATGTGAAAAATGTGTGGATGATCAAATAGAGTTAGCGTGTCAAGAAGAAGAGATTAAGAGTTTCTGTTACC CGAACGTTTACCATAGTAATCCAGAATTCAACAAAAGCTTTTTTTCCAGAGGAGCATGTCCTAATCTCTTTAGAGAGCCC AGTGAAACAAGTGTTGTAAAAGCAAAACAAGTTGCACCATTGATACTTGTTAATACCTTAGGACAAATGATAGATAAAGA GGGTAATAACACTAAAGTATACTATGATGCATTGAAGCGTTATCTAAATGATGATGGTAAAATCAAGGATTGTGGAGATA ATCAAAAGTGTAAGGATTATATTCCAATTATGGAGAAAGTTGCATGGAATAGTGATAAGGAAGTACTATTAAAAACTGCT GTTAATAATACGCAAGAAGCAAATCCTTACTATTATGGAAATGAGGATAATTCTACTTCCGTTGAATTTGGTTCTATATA A
Upstream 100 bases:
>100_bases TACCATGAAGTTTCTTGAAATGTGGTTTCTTTTACTCACATTAAATTTGTAGTTTTTTTATTTTAATACAATTTCAATTT TGACTGTAGAGGAGGTTCCG
Downstream 100 bases:
>100_bases GGCTGAATTTGTCTAATTTTTTCTACACTAGACACAATTTAGTCGTATCTGAACAAATACATAATCTATATAAAGAGGAC GTAGGTACCATCTGTCCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MSKNTYSDQINNSYLYNNKLFYGEEDIDEITEGETTTEKEFTNSSVVKEDFELVEKKLTKCEEEVKRAKAETEWYKKIAE ECKKGSGTGEPVTDEGENENGEITSRKVTSDCSKYENCGPYSHFYKVDNKIGCQGFSSSDLLKELYPEMYSNPKIAKYIE EGANGNYGAVNFKFAFTEDLNSISWLGNIECEKCVDDQIELACQEEEIKSFCYPNVYHSNPEFNKSFFSRGACPNLFREP SETSVVKAKQVAPLILVNTLGQMIDKEGNNTKVYYDALKRYLNDDGKIKDCGDNQKCKDYIPIMEKVAWNSDKEVLLKTA VNNTQEANPYYYGNEDNSTSVEFGSI
Sequences:
>Translated_346_residues MSKNTYSDQINNSYLYNNKLFYGEEDIDEITEGETTTEKEFTNSSVVKEDFELVEKKLTKCEEEVKRAKAETEWYKKIAE ECKKGSGTGEPVTDEGENENGEITSRKVTSDCSKYENCGPYSHFYKVDNKIGCQGFSSSDLLKELYPEMYSNPKIAKYIE EGANGNYGAVNFKFAFTEDLNSISWLGNIECEKCVDDQIELACQEEEIKSFCYPNVYHSNPEFNKSFFSRGACPNLFREP SETSVVKAKQVAPLILVNTLGQMIDKEGNNTKVYYDALKRYLNDDGKIKDCGDNQKCKDYIPIMEKVAWNSDKEVLLKTA VNNTQEANPYYYGNEDNSTSVEFGSI >Mature_345_residues SKNTYSDQINNSYLYNNKLFYGEEDIDEITEGETTTEKEFTNSSVVKEDFELVEKKLTKCEEEVKRAKAETEWYKKIAEE CKKGSGTGEPVTDEGENENGEITSRKVTSDCSKYENCGPYSHFYKVDNKIGCQGFSSSDLLKELYPEMYSNPKIAKYIEE GANGNYGAVNFKFAFTEDLNSISWLGNIECEKCVDDQIELACQEEEIKSFCYPNVYHSNPEFNKSFFSRGACPNLFREPS ETSVVKAKQVAPLILVNTLGQMIDKEGNNTKVYYDALKRYLNDDGKIKDCGDNQKCKDYIPIMEKVAWNSDKEVLLKTAV NNTQEANPYYYGNEDNSTSVEFGSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39387; Mature: 39256
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNTYSDQINNSYLYNNKLFYGEEDIDEITEGETTTEKEFTNSSVVKEDFELVEKKLTK CCCCCCCHHCCCCEEECCEEEECCCCHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHH CEEEVKRAKAETEWYKKIAEECKKGSGTGEPVTDEGENENGEITSRKVTSDCSKYENCGP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCC YSHFYKVDNKIGCQGFSSSDLLKELYPEMYSNPKIAKYIEEGANGNYGAVNFKFAFTEDL HHHHEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEEEECCCC NSISWLGNIECEKCVDDQIELACQEEEIKSFCYPNVYHSNPEFNKSFFSRGACPNLFREP CCHHHCCCCCHHHHHCHHHHHHHCHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHCCC SETSVVKAKQVAPLILVNTLGQMIDKEGNNTKVYYDALKRYLNDDGKIKDCGDNQKCKDY CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCEEECCCCCHHHHH IPIMEKVAWNSDKEVLLKTAVNNTQEANPYYYGNEDNSTSVEFGSI HHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCEECCCC >Mature Secondary Structure SKNTYSDQINNSYLYNNKLFYGEEDIDEITEGETTTEKEFTNSSVVKEDFELVEKKLTK CCCCCCHHCCCCEEECCEEEECCCCHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHH CEEEVKRAKAETEWYKKIAEECKKGSGTGEPVTDEGENENGEITSRKVTSDCSKYENCGP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCC YSHFYKVDNKIGCQGFSSSDLLKELYPEMYSNPKIAKYIEEGANGNYGAVNFKFAFTEDL HHHHEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEEEECCCC NSISWLGNIECEKCVDDQIELACQEEEIKSFCYPNVYHSNPEFNKSFFSRGACPNLFREP CCHHHCCCCCHHHHHCHHHHHHHCHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHCCC SETSVVKAKQVAPLILVNTLGQMIDKEGNNTKVYYDALKRYLNDDGKIKDCGDNQKCKDY CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCEEECCCCCHHHHH IPIMEKVAWNSDKEVLLKTAVNNTQEANPYYYGNEDNSTSVEFGSI HHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA