Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is 190570902
Identifier: 190570902
GI number: 190570902
Start: 518005
End: 518838
Strand: Reverse
Name: 190570902
Synonym: WPa_0481
Alternate gene names: NA
Gene position: 518838-518005 (Counterclockwise)
Preceding gene: 190570905
Following gene: 190570900
Centisome position: 35.0
GC content: 32.97
Gene sequence:
>834_bases ATGAGCAACTCTATACAGGAAAAAAAGGGAAATCCAGTAGTTACGCTAAAGGCTCAAGCGGAAAAGTTTGATTTTAGTGC GTTAAGAGCTAGTAAAGATAATACTGAGGCAAACTCTGGTTCTGCTATGTATAAAGATTTTCCAAGAATGAAATTTATTA TTCAAAATAAAGTTATAACAAAAGAGCTTGTTGATGAATTATATAATAAGCATAAAGACCTGATTTCAAATGATAAAAAT AATAAGTACCGCCAATTTGCAAAACAAGTTTTTACAGGGTTATTTGAATATGCTGAAGCAGAGGTTCCAAGTGATCCTAT CTTAGAGGAACTGGTTACCAATTGTAATCAAGCAGGGTACGAAGGTGCTTTATTTACACAAACTTCTCTTGAGCTTGGTA ATAAGCATGGCTTAACGCTACAAACTCCTGTAAAAGTAATAAATATTGACTGTACTGATATAAATCACATAACGGTTAAA TCTCATATGGAGATACCTGTAGTTGAATTTGATAATCCTGAAAAAAAGTTAAGCGAATTGTCTAGTTCACTAAAGTTTAC ACTTGAATCTCAAGATGGAAAAGACGATGTAACATACAAAGATGGTAAATTGTCACTTACTGTACCCCGAGAATTGAAAA ATTACAAAATCGATGGCAAAAGTTTATTTGATATCATTAAAGAATATTTCTATAAATTCTGCGAGAAATTAGGATTTAAG TTTGAAGTAGAAATAGAGCACAATTTAGGCGATTCAATCGAAGTGAATAGCCATCTGGAAAGTGTGCAGCCACCCACTCA TAGCAATGAACACGAAAATACACCTGGAAACTAA
Upstream 100 bases:
>100_bases GTCACCCCTATTATGACTGTCCATGTTAAGTATATTATTGACATATTAACTATTTTTATGTATTATTATACTATTAGTAG TTCAGATCAAAGTGTTAATA
Downstream 100 bases:
>100_bases TAATTAAAATATTTCAAGCGCCGTTAGCTTATTTGCATAGTCAATGACTTCAGTTGTACTAGACGCAACTTAATCTGACA GAAAAACTAATATCAATCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MSNSIQEKKGNPVVTLKAQAEKFDFSALRASKDNTEANSGSAMYKDFPRMKFIIQNKVITKELVDELYNKHKDLISNDKN NKYRQFAKQVFTGLFEYAEAEVPSDPILEELVTNCNQAGYEGALFTQTSLELGNKHGLTLQTPVKVINIDCTDINHITVK SHMEIPVVEFDNPEKKLSELSSSLKFTLESQDGKDDVTYKDGKLSLTVPRELKNYKIDGKSLFDIIKEYFYKFCEKLGFK FEVEIEHNLGDSIEVNSHLESVQPPTHSNEHENTPGN
Sequences:
>Translated_277_residues MSNSIQEKKGNPVVTLKAQAEKFDFSALRASKDNTEANSGSAMYKDFPRMKFIIQNKVITKELVDELYNKHKDLISNDKN NKYRQFAKQVFTGLFEYAEAEVPSDPILEELVTNCNQAGYEGALFTQTSLELGNKHGLTLQTPVKVINIDCTDINHITVK SHMEIPVVEFDNPEKKLSELSSSLKFTLESQDGKDDVTYKDGKLSLTVPRELKNYKIDGKSLFDIIKEYFYKFCEKLGFK FEVEIEHNLGDSIEVNSHLESVQPPTHSNEHENTPGN >Mature_276_residues SNSIQEKKGNPVVTLKAQAEKFDFSALRASKDNTEANSGSAMYKDFPRMKFIIQNKVITKELVDELYNKHKDLISNDKNN KYRQFAKQVFTGLFEYAEAEVPSDPILEELVTNCNQAGYEGALFTQTSLELGNKHGLTLQTPVKVINIDCTDINHITVKS HMEIPVVEFDNPEKKLSELSSSLKFTLESQDGKDDVTYKDGKLSLTVPRELKNYKIDGKSLFDIIKEYFYKFCEKLGFKF EVEIEHNLGDSIEVNSHLESVQPPTHSNEHENTPGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31466; Mature: 31334
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSIQEKKGNPVVTLKAQAEKFDFSALRASKDNTEANSGSAMYKDFPRMKFIIQNKVIT CCCCCCHHCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHH KELVDELYNKHKDLISNDKNNKYRQFAKQVFTGLFEYAEAEVPSDPILEELVTNCNQAGY HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC EGALFTQTSLELGNKHGLTLQTPVKVINIDCTDINHITVKSHMEIPVVEFDNPEKKLSEL CCEEEEEHHHHCCCCCCCEEECCEEEEEEECCCCCEEEEECCCCEEEEECCCHHHHHHHH SSSLKFTLESQDGKDDVTYKDGKLSLTVPRELKNYKIDGKSLFDIIKEYFYKFCEKLGFK HHHHEEEEECCCCCCCCEEECCEEEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCE FEVEIEHNLGDSIEVNSHLESVQPPTHSNEHENTPGN EEEEEECCCCCCEEECHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SNSIQEKKGNPVVTLKAQAEKFDFSALRASKDNTEANSGSAMYKDFPRMKFIIQNKVIT CCCCCHHCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHH KELVDELYNKHKDLISNDKNNKYRQFAKQVFTGLFEYAEAEVPSDPILEELVTNCNQAGY HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC EGALFTQTSLELGNKHGLTLQTPVKVINIDCTDINHITVKSHMEIPVVEFDNPEKKLSEL CCEEEEEHHHHCCCCCCCEEECCEEEEEEECCCCCEEEEECCCCEEEEECCCHHHHHHHH SSSLKFTLESQDGKDDVTYKDGKLSLTVPRELKNYKIDGKSLFDIIKEYFYKFCEKLGFK HHHHEEEEECCCCCCCCEEECCEEEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCE FEVEIEHNLGDSIEVNSHLESVQPPTHSNEHENTPGN EEEEEECCCCCCEEECHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA