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The map label for this gene is 190570879

Identifier: 190570879

GI number: 190570879

Start: 484654

End: 485577

Strand: Direct

Name: 190570879

Synonym: WPa_0455

Alternate gene names: NA

Gene position: 484654-485577 (Clockwise)

Preceding gene: 190570877

Following gene: 190570884

Centisome position: 32.69

GC content: 34.2

Gene sequence:

>924_bases
ATGAAAAAATACATCCTTTCAGTTGACGGCGGAGGCATAAGGGGCATAATACCAGCCATCATTCTAGCAGAAATAGAAAA
AAGAACAAGAAAGAGGATAGCTGAAATCTTTCACTTAATGGCAGGAACCTCAACCGGTGGAATTGTTATAGCAGGATTAT
GTAAAAAAGATAAACAAGGAAATCCCCAATACTCAGCCAACGACCTAGTTGAGTTTTACCAAAAGTACGGAGCATATATT
TTTAAATCTTCATTTTTGAGAAGATCAATATTTTCTTGGCTTAATTGCGCACAATACCCACATAAAAATATTGAATTTGT
ACTGGATAAATATTTTGGAGAGGATATTCTAAAAAATACATTAAGTAAGGTACTGATAACAAGTTATGATATTAACAACA
ACTATCCTTTCTTTTTTAAGAGCTGGAGAGAAGACAGAAATTTTATCAAATTGAAAGATGCATTACGAGCTACAACTGCA
GCACCTACTTACTTTGCACCTAAATATCTTAAAATCAACCAAAAGGAAATGGTATTAGTGGATGGTGGGGTGTTTGCCAA
TAATCCAGCGGCTTGTGCATATGCAAGTGGTAAGAGGTTATTTCCAAATGATGAGATTATACTGTTATCAATTGGTACTG
GCAGGACAGATAGAAGCATAGCTAATTCAAGGAGATTTGGAAAGATAGGTTGGATAAAACCTCTGTTGAACGTAATGTTT
GCCTCAAGTTTAGATGCAGTAAATTACCAACTTGATCAAGTTATAGCTGATAAATATATACGCATACAATCGCAATTGAA
AATAGCATCACCTGACATGGATAATATTACATCAAAAAATATCAAATCTCTTCAGCAAGAGGCAAAGGCAATGGTAGAAG
GCAATCAAAAAGTAATCGATAAATTTTGTGACATTGTATCTTAA

Upstream 100 bases:

>100_bases
GGTGCAATTTTCCCCAGGAGTGAAACATACAGTAGTACTTGGACAAGAAACACAACCTGATAAAAGTGAGCAAGTTAACA
GAATTAATAAATATCTAATC

Downstream 100 bases:

>100_bases
TTTACATCAAGTAAAATCTAAAGCTTTAGTTGAACCAGAAAAGTAAAATAAGCAAATTTGCCTTGTTGAGAAATCTTATT
ATCTTTGTGTACTACTTTCT

Product: patatin family protein

Products: NA

Alternate protein names: Patatin Family Protein; Patatin-Like Phospholipase; Patatin-Related Protein; Patatin-Like Protein; Phospholipase Patatin Family; Patatin-Like Phospholipase Family; Patatin Family Phospholipase

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MKKYILSVDGGGIRGIIPAIILAEIEKRTRKRIAEIFHLMAGTSTGGIVIAGLCKKDKQGNPQYSANDLVEFYQKYGAYI
FKSSFLRRSIFSWLNCAQYPHKNIEFVLDKYFGEDILKNTLSKVLITSYDINNNYPFFFKSWREDRNFIKLKDALRATTA
APTYFAPKYLKINQKEMVLVDGGVFANNPAACAYASGKRLFPNDEIILLSIGTGRTDRSIANSRRFGKIGWIKPLLNVMF
ASSLDAVNYQLDQVIADKYIRIQSQLKIASPDMDNITSKNIKSLQQEAKAMVEGNQKVIDKFCDIVS

Sequences:

>Translated_307_residues
MKKYILSVDGGGIRGIIPAIILAEIEKRTRKRIAEIFHLMAGTSTGGIVIAGLCKKDKQGNPQYSANDLVEFYQKYGAYI
FKSSFLRRSIFSWLNCAQYPHKNIEFVLDKYFGEDILKNTLSKVLITSYDINNNYPFFFKSWREDRNFIKLKDALRATTA
APTYFAPKYLKINQKEMVLVDGGVFANNPAACAYASGKRLFPNDEIILLSIGTGRTDRSIANSRRFGKIGWIKPLLNVMF
ASSLDAVNYQLDQVIADKYIRIQSQLKIASPDMDNITSKNIKSLQQEAKAMVEGNQKVIDKFCDIVS
>Mature_307_residues
MKKYILSVDGGGIRGIIPAIILAEIEKRTRKRIAEIFHLMAGTSTGGIVIAGLCKKDKQGNPQYSANDLVEFYQKYGAYI
FKSSFLRRSIFSWLNCAQYPHKNIEFVLDKYFGEDILKNTLSKVLITSYDINNNYPFFFKSWREDRNFIKLKDALRATTA
APTYFAPKYLKINQKEMVLVDGGVFANNPAACAYASGKRLFPNDEIILLSIGTGRTDRSIANSRRFGKIGWIKPLLNVMF
ASSLDAVNYQLDQVIADKYIRIQSQLKIASPDMDNITSKNIKSLQQEAKAMVEGNQKVIDKFCDIVS

Specific function: Unknown

COG id: COG3621

COG function: function code R; Patatin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI48525351, Length=324, Percent_Identity=26.8518518518519, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17544092, Length=317, Percent_Identity=26.4984227129338, Blast_Score=104, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI17551040, Length=241, Percent_Identity=29.045643153527, Blast_Score=77, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34706; Mature: 34706

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYILSVDGGGIRGIIPAIILAEIEKRTRKRIAEIFHLMAGTSTGGIVIAGLCKKDKQG
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC
NPQYSANDLVEFYQKYGAYIFKSSFLRRSIFSWLNCAQYPHKNIEFVLDKYFGEDILKNT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LSKVLITSYDINNNYPFFFKSWREDRNFIKLKDALRATTAAPTYFAPKYLKINQKEMVLV
HHHHHHEEEECCCCCCHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCEEEECCCEEEEE
DGGVFANNPAACAYASGKRLFPNDEIILLSIGTGRTDRSIANSRRFGKIGWIKPLLNVMF
ECCEECCCCCCEEECCCCCCCCCCCEEEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHH
ASSLDAVNYQLDQVIADKYIRIQSQLKIASPDMDNITSKNIKSLQQEAKAMVEGNQKVID
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
KFCDIVS
HHHHHCC
>Mature Secondary Structure
MKKYILSVDGGGIRGIIPAIILAEIEKRTRKRIAEIFHLMAGTSTGGIVIAGLCKKDKQG
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC
NPQYSANDLVEFYQKYGAYIFKSSFLRRSIFSWLNCAQYPHKNIEFVLDKYFGEDILKNT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LSKVLITSYDINNNYPFFFKSWREDRNFIKLKDALRATTAAPTYFAPKYLKINQKEMVLV
HHHHHHEEEECCCCCCHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCEEEECCCEEEEE
DGGVFANNPAACAYASGKRLFPNDEIILLSIGTGRTDRSIANSRRFGKIGWIKPLLNVMF
ECCEECCCCCCEEECCCCCCCCCCCEEEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHH
ASSLDAVNYQLDQVIADKYIRIQSQLKIASPDMDNITSKNIKSLQQEAKAMVEGNQKVID
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
KFCDIVS
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA