Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is 190570873
Identifier: 190570873
GI number: 190570873
Start: 481791
End: 482147
Strand: Direct
Name: 190570873
Synonym: WPa_0449
Alternate gene names: NA
Gene position: 481791-482147 (Clockwise)
Preceding gene: 190570872
Following gene: 190570874
Centisome position: 32.5
GC content: 31.65
Gene sequence:
>357_bases ATGCTATCACTTGGTCAACATAAGCTTTCTCCAACAAGTGTAAGGTATAGTAAAGAAAATCGTTGGAGTACTATTGAGTG TATTGGTAAAATACCTTCATTACAAAATATTGGCCAAGGTACAGAAAATATAGACTTAGAAGGAGTAATTTATTTCCATA ATCTCAATGATTTTAATCGATTAAAAAGTATGAAAGAAGCTGAGAAAAATCAGGAACCAAGTATCTTAGTAGATAATTTA GGGAATGTTTTGGGAAGATTTGTTATTGTGCGGTTAGAAGAAAAGCAAACGTCGTATTTTCCCTGTGGATTACCAAAAAA GGTTGAATTTAGCTTAAGTTTAAGGAGTTATGTATGA
Upstream 100 bases:
>100_bases AACCTAACCAAGACGTACGTAGTCTTGCCGATGCAGTGATAAAAAGAATAAGAGAAAAATCGCGAGACGTTCTATTTGAT TCAATAGAACCAATTTATTA
Downstream 100 bases:
>100_bases CAGTACATTATATAGCACGAGAAAATGAAATGTTGGATTACATATGCTTTAAACACTATGGACATAGCTCTGGAGCAGTA GAATTAGTATTGAAGGAAAA
Product: phage tail protein GpU
Products: NA
Alternate protein names: Prophage P2W3 Tail Protein U; Tail Protein U; Phage Tail Protein GpU
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MLSLGQHKLSPTSVRYSKENRWSTIECIGKIPSLQNIGQGTENIDLEGVIYFHNLNDFNRLKSMKEAEKNQEPSILVDNL GNVLGRFVIVRLEEKQTSYFPCGLPKKVEFSLSLRSYV
Sequences:
>Translated_118_residues MLSLGQHKLSPTSVRYSKENRWSTIECIGKIPSLQNIGQGTENIDLEGVIYFHNLNDFNRLKSMKEAEKNQEPSILVDNL GNVLGRFVIVRLEEKQTSYFPCGLPKKVEFSLSLRSYV >Mature_118_residues MLSLGQHKLSPTSVRYSKENRWSTIECIGKIPSLQNIGQGTENIDLEGVIYFHNLNDFNRLKSMKEAEKNQEPSILVDNL GNVLGRFVIVRLEEKQTSYFPCGLPKKVEFSLSLRSYV
Specific function: Unknown
COG id: COG3499
COG function: function code R; Phage protein U
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13476; Mature: 13476
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSLGQHKLSPTSVRYSKENRWSTIECIGKIPSLQNIGQGTENIDLEGVIYFHNLNDFNR CCCCCCCCCCCCEEEECCCCCCCHHHHHHCCCCCHHCCCCCCCCCCEEEEEEECCCHHHH LKSMKEAEKNQEPSILVDNLGNVLGRFVIVRLEEKQTSYFPCGLPKKVEFSLSLRSYV HHHHHHHHCCCCCCEEHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCEEEEEEECCCC >Mature Secondary Structure MLSLGQHKLSPTSVRYSKENRWSTIECIGKIPSLQNIGQGTENIDLEGVIYFHNLNDFNR CCCCCCCCCCCCEEEECCCCCCCHHHHHHCCCCCHHCCCCCCCCCCEEEEEEECCCHHHH LKSMKEAEKNQEPSILVDNLGNVLGRFVIVRLEEKQTSYFPCGLPKKVEFSLSLRSYV HHHHHHHHCCCCCCEEHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA