Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
---|---|
Accession | NC_010981 |
Length | 1,482,455 |
Click here to switch to the map view.
The map label for this gene is 190570856
Identifier: 190570856
GI number: 190570856
Start: 460932
End: 461951
Strand: Direct
Name: 190570856
Synonym: WPa_0431
Alternate gene names: NA
Gene position: 460932-461951 (Clockwise)
Preceding gene: 190570835
Following gene: 190570858
Centisome position: 31.09
GC content: 34.31
Gene sequence:
>1020_bases ATGGATGAAAGTAAGATCATATTTTATACTACTCCAGGTGGAAATATAGAAATTGAAGTTTTATGCAGAAATGAAAATCT TTGGCTTACACAGAAAAAGATGGCTGAATTGTTTGATGTTCAGTTGCCGGCTATTAGTAAGCATATTAAAAACATATTTG AGTCTGGTGAATTACAGGAAAAAGAAGTTATTTCCACTTTTGATGTCACTGCTGCAGATGGTAAAAATTACCCGACGCAA TTTTACAATGTAGATACAATCATAGCTGTTGGTTATCGAGTTAATTCTAAAAAGGCTACATCTTTCAGAGTATGGGCTAC AAAAATTTTGAGAGATTTTATCATCAAAGGATTTGCATTAGATAGCGAACGGCTAAAAAACGGCCCAAAGTTTGGCAAAG ACTACTTCAATGAATTACTTGAAAAAATCAGGGAAATACGAGCATCCGAACGTAGGTTTTACCAGAAGATTACCGACATT TATGCTGAATGCTCTGCAGACTATGATCCAAATTCAGAAATAACAAAACAGTTTTACGCAAAAGTACAAAATAAATTATA TTGGGCAATTTATGGCTTAACTGCAGCAGAGTTGATATGTTCACGAGCTGACCACAAAAAGCTGCATATGGGGCTAACTA CATGGAAAGATGGTCCAGGTAACAAAATTCATAAGAGTGATGTCAGTACTGCGAAAAACTATTTGACTAAGGAAGAGTTG AGTGAACTAAATCATATTGTTTCGATGTATCTAGATTATGCAGAACTTCAAGCAAGAAAGCATCGGCTAATGAAAATGCA GAATTGGGTTGAAAAGTTGGATGCATTTCTATTGTTCAATGATTATGAAGTACTTAAAGATGCTGGTAAAGTTAGTGCTG AAGTTGCAAAAGCTCTAGCTGAAGGAGAATACGAAAAGTACAGAGTTATACAAGATAAATTACATGAATCTGACTTTGAT GAATTGATTAAAGCAAGTAAAGAAAGTGAGAAAATAACTACAACAAAAACCAGCTTGTAG
Upstream 100 bases:
>100_bases CAGCTCTTTCCTACAAGTGCTATATAGAACTTTACCTTTATTAAAAGTGGCTCACATATGTTTCTTCAGCAACAGTTTAC TTATAAAGTGGAGGTAGGTA
Downstream 100 bases:
>100_bases TTGAGCTATCTGTGTTTGACATCTTGCTTTTGTTTTAATTTCAAGGGGTGAACCACCCTAGTGAAAACATAAATCTTTAT AACCAGCTCTTGTTATATAT
Product: Putative virulence factor RhuM protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MDESKIIFYTTPGGNIEIEVLCRNENLWLTQKKMAELFDVQLPAISKHIKNIFESGELQEKEVISTFDVTAADGKNYPTQ FYNVDTIIAVGYRVNSKKATSFRVWATKILRDFIIKGFALDSERLKNGPKFGKDYFNELLEKIREIRASERRFYQKITDI YAECSADYDPNSEITKQFYAKVQNKLYWAIYGLTAAELICSRADHKKLHMGLTTWKDGPGNKIHKSDVSTAKNYLTKEEL SELNHIVSMYLDYAELQARKHRLMKMQNWVEKLDAFLLFNDYEVLKDAGKVSAEVAKALAEGEYEKYRVIQDKLHESDFD ELIKASKESEKITTTKTSL
Sequences:
>Translated_339_residues MDESKIIFYTTPGGNIEIEVLCRNENLWLTQKKMAELFDVQLPAISKHIKNIFESGELQEKEVISTFDVTAADGKNYPTQ FYNVDTIIAVGYRVNSKKATSFRVWATKILRDFIIKGFALDSERLKNGPKFGKDYFNELLEKIREIRASERRFYQKITDI YAECSADYDPNSEITKQFYAKVQNKLYWAIYGLTAAELICSRADHKKLHMGLTTWKDGPGNKIHKSDVSTAKNYLTKEEL SELNHIVSMYLDYAELQARKHRLMKMQNWVEKLDAFLLFNDYEVLKDAGKVSAEVAKALAEGEYEKYRVIQDKLHESDFD ELIKASKESEKITTTKTSL >Mature_339_residues MDESKIIFYTTPGGNIEIEVLCRNENLWLTQKKMAELFDVQLPAISKHIKNIFESGELQEKEVISTFDVTAADGKNYPTQ FYNVDTIIAVGYRVNSKKATSFRVWATKILRDFIIKGFALDSERLKNGPKFGKDYFNELLEKIREIRASERRFYQKITDI YAECSADYDPNSEITKQFYAKVQNKLYWAIYGLTAAELICSRADHKKLHMGLTTWKDGPGNKIHKSDVSTAKNYLTKEEL SELNHIVSMYLDYAELQARKHRLMKMQNWVEKLDAFLLFNDYEVLKDAGKVSAEVAKALAEGEYEKYRVIQDKLHESDFD ELIKASKESEKITTTKTSL
Specific function: Unknown
COG id: COG3943
COG function: function code R; Virulence protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39218; Mature: 39218
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDESKIIFYTTPGGNIEIEVLCRNENLWLTQKKMAELFDVQLPAISKHIKNIFESGELQE CCCCCEEEEECCCCCEEEEEEEECCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHCCCCCH KEVISTFDVTAADGKNYPTQFYNVDTIIAVGYRVNSKKATSFRVWATKILRDFIIKGFAL HHHHHHHCCEECCCCCCCCHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCC DSERLKNGPKFGKDYFNELLEKIREIRASERRFYQKITDIYAECSADYDPNSEITKQFYA CHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH KVQNKLYWAIYGLTAAELICSRADHKKLHMGLTTWKDGPGNKIHKSDVSTAKNYLTKEEL HHHHHHHHHHHHHHHHHHHHHCCCCHHHEECCEECCCCCCCCCCHHHHHHHHHHHHHHHH SELNHIVSMYLDYAELQARKHRLMKMQNWVEKLDAFLLFNDYEVLKDAGKVSAEVAKALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH EGEYEKYRVIQDKLHESDFDELIKASKESEKITTTKTSL CCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MDESKIIFYTTPGGNIEIEVLCRNENLWLTQKKMAELFDVQLPAISKHIKNIFESGELQE CCCCCEEEEECCCCCEEEEEEEECCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHCCCCCH KEVISTFDVTAADGKNYPTQFYNVDTIIAVGYRVNSKKATSFRVWATKILRDFIIKGFAL HHHHHHHCCEECCCCCCCCHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCC DSERLKNGPKFGKDYFNELLEKIREIRASERRFYQKITDIYAECSADYDPNSEITKQFYA CHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH KVQNKLYWAIYGLTAAELICSRADHKKLHMGLTTWKDGPGNKIHKSDVSTAKNYLTKEEL HHHHHHHHHHHHHHHHHHHHHCCCCHHHEECCEECCCCCCCCCCHHHHHHHHHHHHHHHH SELNHIVSMYLDYAELQARKHRLMKMQNWVEKLDAFLLFNDYEVLKDAGKVSAEVAKALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH EGEYEKYRVIQDKLHESDFDELIKASKESEKITTTKTSL CCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA