Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is cisA [H]
Identifier: 190570836
GI number: 190570836
Start: 444716
End: 446203
Strand: Reverse
Name: cisA [H]
Synonym: WPa_0411
Alternate gene names: 190570836
Gene position: 446203-444716 (Counterclockwise)
Preceding gene: 190570837
Following gene: 190570833
Centisome position: 30.1
GC content: 34.14
Gene sequence:
>1488_bases ATGCTAAAAGAAGTAAGATGTGCAATATATACGAGAAAATCAAATGAAGATGGTCTAGAACAAAAGTTTAATAGTCTTGA TGCGCAACGTGTAGCATGTGAAAAATATATAAAAAGCCGAGAAGGATGGGTAGCATTGGCAAAAAGGTACGATGATGGCG GATATTCAGGAAAAAACTTAGAAAGACCAGCAATAAAAGAATTATTTGAAGATGTAAAGGCAGGAGAAGTAGATTGTGTA GTAGTATATACGCTCGATAGGCTATCAAGAGAAACAAAAGACAGCATAGAAGTGACATCATTTTTTAGAAGGCACCGAGT AAATTTTATAGCAGTAACGCAGATATTTGATAATAACACACCAATGGGAAAATTTGTACAAACGGTATTATCAGGAGCAG CGCAACTAGAAAGAGAAATGATCGTAGAAAGAGTAAAAAATAAAATAGCAACATCAAAAGAACAAGGATTATGGATGGGT GGAACTTTACCGCTTGGGTATGATGTGAAAGATAAGGAATTAATAATAAATGGAAAAGAAGCAAAGACGGTAAAACATAT ATTTGAGAGGTATATGGAGCTAAAATCAATGGCAGAATTGGCAAGGGAGTTAAATAGTCAAGGTTACAGAACGAAAGCAA GGTTTGATATCTTTAAAAAAGCAACGGTGAGGAGAATAATAACAAATCCAATATATATGGGAAAAATACGGCATTATGAG AAAGAGTATGAAGGAAAACATGAAGCAATAATAGAAGAGGAAAAGTGGCAAAAAGCACAAGAATTAATAAGGAATCAGCC ATATAGAAAAGCAAAATATGAGGAAGCGCTGCTTAGGGGAATAATTAAGTGCAAAAGCTGTGATGTAAATATGACTTTGA CGTACTCAAAAAAAGAGAATAAAAGGTACCGATATTATATATGTAATAACCATTTAAGAGGAAAAAGTTGTGAATCGGTA AATCGAACAGTAGTAGCAGGAAAAGTGGAAAAAGAAGTGATGAAAAGAGCAGAAGATTTATATGAAAAATGTGGAGAAGA ATGGAAAAATTTAAGTTTTGGAAAACAGAAAGAAGTAGTGAAAAAGTTAATAAAGGGAGTAATGGTAAAAGAAGATGGAA TAGAGGTGAGCTCAGAGGATAAGGTGGAATTTATACCAATAAAAAAGAAAGGAAACAAATGCACAGTAGTAGAGCCAGAG GGGAAAACAAACAATGCATTACTGAAAGCAGTGGTGAGGGCTCACCTATGGAAACGTCAGCTAGAGGAAGGAAAATACGC AAATATAAAAGAGCTGAGTGCTAAAGTTAATATAGGTACAAGACGTATACAACAAATTTTAAGATTAAATTATTTAGCAC CAAAAATTAAAGAAGATATAGTAAATGGGAGGCAGCCAAGGGGTTTGAGGTTAGTGGATTTAAGAGAAATACCGATGCTT TGGGGTGAGCAGATGGAGAAGTTTTATGGTCTTAATTTACAAAAGTAA
Upstream 100 bases:
>100_bases TACGTCATTGTCAGCAGTAGCCGGGAAAATAATGGGAATGAGCTACAACGGACCTTTATTATTCGGGATGCGTGACAAAA GTGGAAATTGAGGAGAGAGA
Downstream 100 bases:
>100_bases CAGGAGATCGATGTGCCAGAAATTGGGGAAATCAGTGTTAAAAGCTTAATTATATAATGAAAATAGTAATAATCTTAACT TATATACGAAATGACACCAG
Product: site-specific recombinase, resolvase family
Products: NA
Alternate protein names: Stage IV sporulation protein CA [H]
Number of amino acids: Translated: 495; Mature: 495
Protein sequence:
>495_residues MLKEVRCAIYTRKSNEDGLEQKFNSLDAQRVACEKYIKSREGWVALAKRYDDGGYSGKNLERPAIKELFEDVKAGEVDCV VVYTLDRLSRETKDSIEVTSFFRRHRVNFIAVTQIFDNNTPMGKFVQTVLSGAAQLEREMIVERVKNKIATSKEQGLWMG GTLPLGYDVKDKELIINGKEAKTVKHIFERYMELKSMAELARELNSQGYRTKARFDIFKKATVRRIITNPIYMGKIRHYE KEYEGKHEAIIEEEKWQKAQELIRNQPYRKAKYEEALLRGIIKCKSCDVNMTLTYSKKENKRYRYYICNNHLRGKSCESV NRTVVAGKVEKEVMKRAEDLYEKCGEEWKNLSFGKQKEVVKKLIKGVMVKEDGIEVSSEDKVEFIPIKKKGNKCTVVEPE GKTNNALLKAVVRAHLWKRQLEEGKYANIKELSAKVNIGTRRIQQILRLNYLAPKIKEDIVNGRQPRGLRLVDLREIPML WGEQMEKFYGLNLQK
Sequences:
>Translated_495_residues MLKEVRCAIYTRKSNEDGLEQKFNSLDAQRVACEKYIKSREGWVALAKRYDDGGYSGKNLERPAIKELFEDVKAGEVDCV VVYTLDRLSRETKDSIEVTSFFRRHRVNFIAVTQIFDNNTPMGKFVQTVLSGAAQLEREMIVERVKNKIATSKEQGLWMG GTLPLGYDVKDKELIINGKEAKTVKHIFERYMELKSMAELARELNSQGYRTKARFDIFKKATVRRIITNPIYMGKIRHYE KEYEGKHEAIIEEEKWQKAQELIRNQPYRKAKYEEALLRGIIKCKSCDVNMTLTYSKKENKRYRYYICNNHLRGKSCESV NRTVVAGKVEKEVMKRAEDLYEKCGEEWKNLSFGKQKEVVKKLIKGVMVKEDGIEVSSEDKVEFIPIKKKGNKCTVVEPE GKTNNALLKAVVRAHLWKRQLEEGKYANIKELSAKVNIGTRRIQQILRLNYLAPKIKEDIVNGRQPRGLRLVDLREIPML WGEQMEKFYGLNLQK >Mature_495_residues MLKEVRCAIYTRKSNEDGLEQKFNSLDAQRVACEKYIKSREGWVALAKRYDDGGYSGKNLERPAIKELFEDVKAGEVDCV VVYTLDRLSRETKDSIEVTSFFRRHRVNFIAVTQIFDNNTPMGKFVQTVLSGAAQLEREMIVERVKNKIATSKEQGLWMG GTLPLGYDVKDKELIINGKEAKTVKHIFERYMELKSMAELARELNSQGYRTKARFDIFKKATVRRIITNPIYMGKIRHYE KEYEGKHEAIIEEEKWQKAQELIRNQPYRKAKYEEALLRGIIKCKSCDVNMTLTYSKKENKRYRYYICNNHLRGKSCESV NRTVVAGKVEKEVMKRAEDLYEKCGEEWKNLSFGKQKEVVKKLIKGVMVKEDGIEVSSEDKVEFIPIKKKGNKCTVVEPE GKTNNALLKAVVRAHLWKRQLEEGKYANIKELSAKVNIGTRRIQQILRLNYLAPKIKEDIVNGRQPRGLRLVDLREIPML WGEQMEKFYGLNLQK
Specific function: Putative site-specific recombinase having a very important role in sporulation. It probably plays a role in the recombination of spoIIIC and spoIVCB to form sigma K factor [H]
COG id: COG1961
COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 recombinase domain [H]
Homologues:
Organism=Escherichia coli, GI1787404, Length=109, Percent_Identity=39.4495412844037, Blast_Score=81, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011109 - InterPro: IPR006118 - InterPro: IPR006119 [H]
Pfam domain/function: PF07508 Recombinase; PF00239 Resolvase [H]
EC number: NA
Molecular weight: Translated: 57594; Mature: 57594
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKEVRCAIYTRKSNEDGLEQKFNSLDAQRVACEKYIKSREGWVALAKRYDDGGYSGKNL CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCC ERPAIKELFEDVKAGEVDCVVVYTLDRLSRETKDSIEVTSFFRRHRVNFIAVTQIFDNNT CCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC PMGKFVQTVLSGAAQLEREMIVERVKNKIATSKEQGLWMGGTLPLGYDVKDKELIINGKE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCEEECCCCCCCCCCCCCEEEEECHH AKTVKHIFERYMELKSMAELARELNSQGYRTKARFDIFKKATVRRIITNPIYMGKIRHYE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH KEYEGKHEAIIEEEKWQKAQELIRNQPYRKAKYEEALLRGIIKCKSCDVNMTLTYSKKEN HHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC KRYRYYICNNHLRGKSCESVNRTVVAGKVEKEVMKRAEDLYEKCGEEWKNLSFGKQKEVV CEEEEEEECCCCCCCCCHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH KKLIKGVMVKEDGIEVSSEDKVEFIPIKKKGNKCTVVEPEGKTNNALLKAVVRAHLWKRQ HHHHHHHEECCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH LEEGKYANIKELSAKVNIGTRRIQQILRLNYLAPKIKEDIVNGRQPRGLRLVDLREIPML HHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEEEEHHHHHHH WGEQMEKFYGLNLQK HHHHHHHHHCCCCCC >Mature Secondary Structure MLKEVRCAIYTRKSNEDGLEQKFNSLDAQRVACEKYIKSREGWVALAKRYDDGGYSGKNL CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCC ERPAIKELFEDVKAGEVDCVVVYTLDRLSRETKDSIEVTSFFRRHRVNFIAVTQIFDNNT CCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC PMGKFVQTVLSGAAQLEREMIVERVKNKIATSKEQGLWMGGTLPLGYDVKDKELIINGKE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCEEECCCCCCCCCCCCCEEEEECHH AKTVKHIFERYMELKSMAELARELNSQGYRTKARFDIFKKATVRRIITNPIYMGKIRHYE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH KEYEGKHEAIIEEEKWQKAQELIRNQPYRKAKYEEALLRGIIKCKSCDVNMTLTYSKKEN HHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC KRYRYYICNNHLRGKSCESVNRTVVAGKVEKEVMKRAEDLYEKCGEEWKNLSFGKQKEVV CEEEEEEECCCCCCCCCHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH KKLIKGVMVKEDGIEVSSEDKVEFIPIKKKGNKCTVVEPEGKTNNALLKAVVRAHLWKRQ HHHHHHHEECCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH LEEGKYANIKELSAKVNIGTRRIQQILRLNYLAPKIKEDIVNGRQPRGLRLVDLREIPML HHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEEEEHHHHHHH WGEQMEKFYGLNLQK HHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2105293; 7704261; 8969508; 9384377 [H]