Click here to switch to the map view.

The map label for this gene is 190570834

Identifier: 190570834

GI number: 190570834

Start: 440431

End: 441426

Strand: Direct

Name: 190570834

Synonym: WPa_0409

Alternate gene names: NA

Gene position: 440431-441426 (Clockwise)

Preceding gene: 190570830

Following gene: 190570835

Centisome position: 29.71

GC content: 30.52

Gene sequence:

>996_bases
ATGGATGCTAAAGTAAGCCATGCAGAAATTACTAAACGTGTTGCAGCATGTGTAGTCGATGCAATAATATTTCTATCCTT
TTATTTATTCACTTTGTTCATATCATCAGATAAATCCTTTACTGAATTTTTTAATTATATCTTTTCTGACACTGCTATAA
TCTCCACGTCAATTCAAGGGGAAGTATTAGAAACATTACTGTTTATAGCACTAGAAACATTAATGATAACAAAGTTTGGC
TGGACTCCTGGAAAATTGCTATTTGGTATATACATAAAGGATGCAAATACACTTAAAAACGTTGCTTTAATGCAAGCAGT
GATAAGGAGTACTCTTAAGGTGCTCTTGTTGAGCTGTATTTCTAACTGGTTCTTCATTTTACCAATTTTAGTTTTAATAT
TTGCAACATTTGATCAACGTAAACAGACTTTTTATGATAAAACTATAAAAACAGTGGTAATTGACTACAAACCTGAAAAA
CATCACTTAAATTTAAACTGTGTGGGGATAATTAGGCGCGCAGTAGCATATATTATAGACCATTTTATTATTATTGGAAT
TTCTTTAGCTTTTTTCTCTTTCGTACAAATAGCTTTTGATCCTATTAAAGCTGATTTATTAACCACATACTTATTTTTTC
TACTATCAATAATATTTGGAGTATTCATGATGAGAAGATTTAGCGGTACTCCAGGACAACTATTGTGCGGTATTCACATA
AAAGATGCAAATACACTTGAAAATATCACTTTAGTACAGGCAACAGTCAGGTACGTTTTGTTTGAAGCTTTTAATGTATT
CATACCGTGTTATATTTTGTCTCTAGAAGAATTCTGTAATCAGCATAATTCTGAAAAGTGGTCTGGAGCTTTATTAACAT
TAACATTTGTAGTTATAATATTAATTTTTATATTCGCAATACTCGACAAACGCAAGCAGCTTTTTTACGATAAAATTGCA
AAAACAGTGGCAATATACTACAAATCTTCAAGATAA

Upstream 100 bases:

>100_bases
GCAAATATTTCTCATGCTCTCAACCAGCAGTACAAGCAACCAATTTTACTATTATTTAACCGCTAACGTGATACATTAGA
TAATGGTGTTAGGTATAAAA

Downstream 100 bases:

>100_bases
TTTTCTTCTTGCTATAATTGATAATATATGCCTACTGTAGTTGATGTGATTCTTTTAATACTAGTTTCAAGTAAACTATG
CGATTTCTTACAATATAAAA

Product: putative RDD domain transmembrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MDAKVSHAEITKRVAACVVDAIIFLSFYLFTLFISSDKSFTEFFNYIFSDTAIISTSIQGEVLETLLFIALETLMITKFG
WTPGKLLFGIYIKDANTLKNVALMQAVIRSTLKVLLLSCISNWFFILPILVLIFATFDQRKQTFYDKTIKTVVIDYKPEK
HHLNLNCVGIIRRAVAYIIDHFIIIGISLAFFSFVQIAFDPIKADLLTTYLFFLLSIIFGVFMMRRFSGTPGQLLCGIHI
KDANTLENITLVQATVRYVLFEAFNVFIPCYILSLEEFCNQHNSEKWSGALLTLTFVVIILIFIFAILDKRKQLFYDKIA
KTVAIYYKSSR

Sequences:

>Translated_331_residues
MDAKVSHAEITKRVAACVVDAIIFLSFYLFTLFISSDKSFTEFFNYIFSDTAIISTSIQGEVLETLLFIALETLMITKFG
WTPGKLLFGIYIKDANTLKNVALMQAVIRSTLKVLLLSCISNWFFILPILVLIFATFDQRKQTFYDKTIKTVVIDYKPEK
HHLNLNCVGIIRRAVAYIIDHFIIIGISLAFFSFVQIAFDPIKADLLTTYLFFLLSIIFGVFMMRRFSGTPGQLLCGIHI
KDANTLENITLVQATVRYVLFEAFNVFIPCYILSLEEFCNQHNSEKWSGALLTLTFVVIILIFIFAILDKRKQLFYDKIA
KTVAIYYKSSR
>Mature_331_residues
MDAKVSHAEITKRVAACVVDAIIFLSFYLFTLFISSDKSFTEFFNYIFSDTAIISTSIQGEVLETLLFIALETLMITKFG
WTPGKLLFGIYIKDANTLKNVALMQAVIRSTLKVLLLSCISNWFFILPILVLIFATFDQRKQTFYDKTIKTVVIDYKPEK
HHLNLNCVGIIRRAVAYIIDHFIIIGISLAFFSFVQIAFDPIKADLLTTYLFFLLSIIFGVFMMRRFSGTPGQLLCGIHI
KDANTLENITLVQATVRYVLFEAFNVFIPCYILSLEEFCNQHNSEKWSGALLTLTFVVIILIFIFAILDKRKQLFYDKIA
KTVAIYYKSSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37917; Mature: 37917

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAKVSHAEITKRVAACVVDAIIFLSFYLFTLFISSDKSFTEFFNYIFSDTAIISTSIQG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHEECCCHH
EVLETLLFIALETLMITKFGWTPGKLLFGIYIKDANTLKNVALMQAVIRSTLKVLLLSCI
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
SNWFFILPILVLIFATFDQRKQTFYDKTIKTVVIDYKPEKHHLNLNCVGIIRRAVAYIID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEECCHHHHHHHHHHHHHHH
HFIIIGISLAFFSFVQIAFDPIKADLLTTYLFFLLSIIFGVFMMRRFSGTPGQLLCGIHI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
KDANTLENITLVQATVRYVLFEAFNVFIPCYILSLEEFCNQHNSEKWSGALLTLTFVVII
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LIFIFAILDKRKQLFYDKIAKTVAIYYKSSR
HHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
>Mature Secondary Structure
MDAKVSHAEITKRVAACVVDAIIFLSFYLFTLFISSDKSFTEFFNYIFSDTAIISTSIQG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHEECCCHH
EVLETLLFIALETLMITKFGWTPGKLLFGIYIKDANTLKNVALMQAVIRSTLKVLLLSCI
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
SNWFFILPILVLIFATFDQRKQTFYDKTIKTVVIDYKPEKHHLNLNCVGIIRRAVAYIID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEECCHHHHHHHHHHHHHHH
HFIIIGISLAFFSFVQIAFDPIKADLLTTYLFFLLSIIFGVFMMRRFSGTPGQLLCGIHI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
KDANTLENITLVQATVRYVLFEAFNVFIPCYILSLEEFCNQHNSEKWSGALLTLTFVVII
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LIFIFAILDKRKQLFYDKIAKTVAIYYKSSR
HHHHHHHHHHHHHHHHHHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA