Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
---|---|
Accession | NC_010981 |
Length | 1,482,455 |
Click here to switch to the map view.
The map label for this gene is 190570823
Identifier: 190570823
GI number: 190570823
Start: 420371
End: 421612
Strand: Direct
Name: 190570823
Synonym: WPa_0392
Alternate gene names: NA
Gene position: 420371-421612 (Clockwise)
Preceding gene: 190570821
Following gene: 190570825
Centisome position: 28.36
GC content: 31.56
Gene sequence:
>1242_bases ATGGGCACAACTAAGATTAGTGAATTTCTATTCAATATAAAAGGTAAAGTGGCAAAACAACATGCTGAACCAATAATTGA AAAAAATCTCTATACTATTTTAGGATTCAAAGATGTAGAAGATTTAGAACATAAGACAAGTAAGTCCGTTAACAAAAAAA TTTGGCAGCTATTTATTGATTGCTTTACAAAGGAAATAGATTATGTAGCAACTAAGCAAGTTGTAAAAAACGTTGTTTGT AATATTGCCAAAAGTGCCCAAGGCAATGCTTTTACTGAAGCTGAAAGCTTAATCTTAAACGAAAAACAAGATAATAAAAA GAGAGAAAGAGCGATTAAAAAAGCTACTAGTATTTTAAAAAAAATCAATCCAGAAAAAGCCTTCAATGAACTTTCAGTAA TAAAAAAACAAGCCGAAGATTTTTTACAAACCGATTTTTATAAGGCGCAGAGCAAACCACTGCCAGGATTTGCTACATCT GGTGCACAGCTTTTTGCGGAAACTTTGAAATATATAGAAACACTAGAAAAATTATCAGAAGTTAAAAAGGAAGATTTAAC TAAGAGTTTCCTATTAAATTATATTAGTTCACTGAACAAAAAGTATCCTAAATCACAAGGTAAAAGGGAAGATGCTATAC GAATACTATCAAGCGATGAGTTGAAGAATTTTTATAATAAAGGTGTAGAGGAAGGAATACTACAACCGCTGGTATCATAT AAAGAATGCAGAAATCTGTATGATAAAATGAGCCAAACAAAGGATGAATGTATAATCAAAAAAGAAGAACATGAGAAAGC AAGTAAGTCAATAACCAGTATAATTAGTGACATAAAAAAATGTAGAGAAGCAGTCCTTAGTTGCAAAAATTTTCAGAGCT CCTACATAAAGGAAAAAGCAGAACACCCATTTAGAGGCACCTCATGTCAAAAAATGATTGATATATATCAAGAGAGAATT GCTGGATATCAGGAAAAAATTCGTCAAAACCTAAACCAAATAAGAGCAATATTAAAAGATACGCCGCAAGATGTGGAAAA ATTTAAGGAAATAATCAATTGTGTGCATGAAGCAGAGCAGTATGATGAAATTTTTGATTCGGCTTTAATTTGTTTATCGA ACATACAGAATAAGCTAGATATTCAACCAGAAAATCCCCTAACAGAACTCAGAGCTTCACAAATCAACGTTGAAATTGAG CTAACTAGGCTCTGTGAACAAAATATTAGAGTAAGCATGTGA
Upstream 100 bases:
>100_bases GGAACAAAGTTAATCTTCAATTATATTAATAGTAAGTAAAAATTAAGCATTAAGCTTTTATACTTTATATTATATAACAT TAATATTGTGAGGTAATATT
Downstream 100 bases:
>100_bases GTGCTTCAACAAAATTCAAAAAACCAATAAAGACCTCATAAGTCTTATCAAAATAGGAGATTTCTAATAGTGGCAAATAC CATGTATTTCTTTCAATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MGTTKISEFLFNIKGKVAKQHAEPIIEKNLYTILGFKDVEDLEHKTSKSVNKKIWQLFIDCFTKEIDYVATKQVVKNVVC NIAKSAQGNAFTEAESLILNEKQDNKKRERAIKKATSILKKINPEKAFNELSVIKKQAEDFLQTDFYKAQSKPLPGFATS GAQLFAETLKYIETLEKLSEVKKEDLTKSFLLNYISSLNKKYPKSQGKREDAIRILSSDELKNFYNKGVEEGILQPLVSY KECRNLYDKMSQTKDECIIKKEEHEKASKSITSIISDIKKCREAVLSCKNFQSSYIKEKAEHPFRGTSCQKMIDIYQERI AGYQEKIRQNLNQIRAILKDTPQDVEKFKEIINCVHEAEQYDEIFDSALICLSNIQNKLDIQPENPLTELRASQINVEIE LTRLCEQNIRVSM
Sequences:
>Translated_413_residues MGTTKISEFLFNIKGKVAKQHAEPIIEKNLYTILGFKDVEDLEHKTSKSVNKKIWQLFIDCFTKEIDYVATKQVVKNVVC NIAKSAQGNAFTEAESLILNEKQDNKKRERAIKKATSILKKINPEKAFNELSVIKKQAEDFLQTDFYKAQSKPLPGFATS GAQLFAETLKYIETLEKLSEVKKEDLTKSFLLNYISSLNKKYPKSQGKREDAIRILSSDELKNFYNKGVEEGILQPLVSY KECRNLYDKMSQTKDECIIKKEEHEKASKSITSIISDIKKCREAVLSCKNFQSSYIKEKAEHPFRGTSCQKMIDIYQERI AGYQEKIRQNLNQIRAILKDTPQDVEKFKEIINCVHEAEQYDEIFDSALICLSNIQNKLDIQPENPLTELRASQINVEIE LTRLCEQNIRVSM >Mature_412_residues GTTKISEFLFNIKGKVAKQHAEPIIEKNLYTILGFKDVEDLEHKTSKSVNKKIWQLFIDCFTKEIDYVATKQVVKNVVCN IAKSAQGNAFTEAESLILNEKQDNKKRERAIKKATSILKKINPEKAFNELSVIKKQAEDFLQTDFYKAQSKPLPGFATSG AQLFAETLKYIETLEKLSEVKKEDLTKSFLLNYISSLNKKYPKSQGKREDAIRILSSDELKNFYNKGVEEGILQPLVSYK ECRNLYDKMSQTKDECIIKKEEHEKASKSITSIISDIKKCREAVLSCKNFQSSYIKEKAEHPFRGTSCQKMIDIYQERIA GYQEKIRQNLNQIRAILKDTPQDVEKFKEIINCVHEAEQYDEIFDSALICLSNIQNKLDIQPENPLTELRASQINVEIEL TRLCEQNIRVSM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47583; Mature: 47452
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTTKISEFLFNIKGKVAKQHAEPIIEKNLYTILGFKDVEDLEHKTSKSVNKKIWQLFID CCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH CFTKEIDYVATKQVVKNVVCNIAKSAQGNAFTEAESLILNEKQDNKKRERAIKKATSILK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH KINPEKAFNELSVIKKQAEDFLQTDFYKAQSKPLPGFATSGAQLFAETLKYIETLEKLSE HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VKKEDLTKSFLLNYISSLNKKYPKSQGKREDAIRILSSDELKNFYNKGVEEGILQPLVSY HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH KECRNLYDKMSQTKDECIIKKEEHEKASKSITSIISDIKKCREAVLSCKNFQSSYIKEKA HHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EHPFRGTSCQKMIDIYQERIAGYQEKIRQNLNQIRAILKDTPQDVEKFKEIINCVHEAEQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH YDEIFDSALICLSNIQNKLDIQPENPLTELRASQINVEIELTRLCEQNIRVSM HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCCC >Mature Secondary Structure GTTKISEFLFNIKGKVAKQHAEPIIEKNLYTILGFKDVEDLEHKTSKSVNKKIWQLFID CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH CFTKEIDYVATKQVVKNVVCNIAKSAQGNAFTEAESLILNEKQDNKKRERAIKKATSILK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH KINPEKAFNELSVIKKQAEDFLQTDFYKAQSKPLPGFATSGAQLFAETLKYIETLEKLSE HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VKKEDLTKSFLLNYISSLNKKYPKSQGKREDAIRILSSDELKNFYNKGVEEGILQPLVSY HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH KECRNLYDKMSQTKDECIIKKEEHEKASKSITSIISDIKKCREAVLSCKNFQSSYIKEKA HHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EHPFRGTSCQKMIDIYQERIAGYQEKIRQNLNQIRAILKDTPQDVEKFKEIINCVHEAEQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH YDEIFDSALICLSNIQNKLDIQPENPLTELRASQINVEIELTRLCEQNIRVSM HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA