Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is 190570811
Identifier: 190570811
GI number: 190570811
Start: 401981
End: 402403
Strand: Reverse
Name: 190570811
Synonym: WPa_0380
Alternate gene names: NA
Gene position: 402403-401981 (Counterclockwise)
Preceding gene: 190570812
Following gene: 190570810
Centisome position: 27.14
GC content: 33.81
Gene sequence:
>423_bases ATGGGTTTATCTATACAGAGCACTATTGGTAATACTGTAGACTTTCTGTTGTGTGCTCGTAGAGACAAGTCTGCGGCACT TGCGTTCTTTCGTAAAGCCTTTAGAGAGAATAACCTTCCTGAGAAAGTAGTAATTGATAAAAGCGGCAGTAATACTGCTG CTCTTGATGATTTGAATACAGAAATTTCTGAAGATTGTAGAATCATGGTTTTTCAAATAAAATATCTAAATAATATTGTC GAACAAGATCATAGATTTATCAAAAAACGAATAAAGCCAATGCTTGGTTTTAAGAGCTTCCACTCCGCAAAGATTACCAT TACCGGCATAGAAAATATTCGTATGATTCAAAAAAGACAAATTATCGGGGCTAATGATAATGTTTCTACTTTTGAGAATT TTGCTATGCTAATTGCTCTATAA
Upstream 100 bases:
>100_bases TTACAAAGGTGGGTTATCACCACTGATAGATGAAGCGGTAAGGAAAAGGAAGAAGCAGGTTGGCAGTAGCTGGAGAGACC TACGTTAAATTAAACGGCAA
Downstream 100 bases:
>100_bases CTCCCATAATCCCAGTTTAACGATCTTCTTGTACCACAATTTATAGATGCGACAGAACCGTATCAATTGCATATGGTGAC CATGTTGTGAGATATGCTGA
Product: transposase (fragment)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MGLSIQSTIGNTVDFLLCARRDKSAALAFFRKAFRENNLPEKVVIDKSGSNTAALDDLNTEISEDCRIMVFQIKYLNNIV EQDHRFIKKRIKPMLGFKSFHSAKITITGIENIRMIQKRQIIGANDNVSTFENFAMLIAL
Sequences:
>Translated_140_residues MGLSIQSTIGNTVDFLLCARRDKSAALAFFRKAFRENNLPEKVVIDKSGSNTAALDDLNTEISEDCRIMVFQIKYLNNIV EQDHRFIKKRIKPMLGFKSFHSAKITITGIENIRMIQKRQIIGANDNVSTFENFAMLIAL >Mature_139_residues GLSIQSTIGNTVDFLLCARRDKSAALAFFRKAFRENNLPEKVVIDKSGSNTAALDDLNTEISEDCRIMVFQIKYLNNIVE QDHRFIKKRIKPMLGFKSFHSAKITITGIENIRMIQKRQIIGANDNVSTFENFAMLIAL
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: COG3316
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001584 - InterPro: IPR012337 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 15899; Mature: 15768
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLSIQSTIGNTVDFLLCARRDKSAALAFFRKAFRENNLPEKVVIDKSGSNTAALDDLNT CCCCCHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCEECCCCCC EISEDCRIMVFQIKYLNNIVEQDHRFIKKRIKPMLGFKSFHSAKITITGIENIRMIQKRQ CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHH IIGANDNVSTFENFAMLIAL CCCCCCCHHHHHHHEEEEEC >Mature Secondary Structure GLSIQSTIGNTVDFLLCARRDKSAALAFFRKAFRENNLPEKVVIDKSGSNTAALDDLNT CCCCHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCEECCCCCC EISEDCRIMVFQIKYLNNIVEQDHRFIKKRIKPMLGFKSFHSAKITITGIENIRMIQKRQ CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHH IIGANDNVSTFENFAMLIAL CCCCCCCHHHHHHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2548057; 2365064 [H]