Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is 190570808
Identifier: 190570808
GI number: 190570808
Start: 398129
End: 398605
Strand: Reverse
Name: 190570808
Synonym: WPa_0374
Alternate gene names: NA
Gene position: 398605-398129 (Counterclockwise)
Preceding gene: 190570810
Following gene: 190570807
Centisome position: 26.89
GC content: 34.59
Gene sequence:
>477_bases ATGAAAATTTTACAAACCAACTGGCTATGTAGGCCGATGATGATAGAGCAAAAAAGCTTTGACCTGTTGTCACTATATAA CGGAAAACAACCTATCTTTAAAAATATAAAACATGCAGTAAATCAGAATATAGAAAAAACAGCAGTAATAGCAATACATG GAATTTTGACCAAAAAACCAGGGGCTTTTGACGATTTTCTGGGAATGACATCATATGAGAAAATTCAAGAAGAAATAGAA GAAGCATTATCAAACAAAGATATAGAAACTATTCTGCTTGATATAGATAGCCCCGGAGGAGAGGTAAACGGTATATTTGA CCTAGCTGACTTTATTTATGAATCAAGAGCAAAAAAGAGGATAATAGCGATAGCAAATGATGATGCATACTCTGCTGCAT ATGCTATAGCCTCTAGCGCTGAGAAGGTATTTGTGAGCAGAACTTCTGACCTCAGTTATGGATTAGAAAATAGATAA
Upstream 100 bases:
>100_bases TTGACCAAGAAATAGCAGAAGATCAAAAGCGTGCTGATTCTCTCAACCTTTTCTTTGATTCTGATGTCAGGACACAAACA AAATAAATCTCATTTACATT
Downstream 100 bases:
>100_bases AAGTATAACTAAGAAGAGGGAAACAGGGTAAACTCGAGTATTTTAGTAATAATAAGAGGTTACCCATGAAGAAAGATATT ACAGAACTGTACTGTTGCGT
Product: minor capsid protein c (fragment)
Products: NA
Alternate protein names: Serine Peptidase; S49 Family Peptidase; Peptidase S; Prophage LambdaW4 Minor Capsid Protein C; Prophage; Periplasmic Serine Proteases
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MKILQTNWLCRPMMIEQKSFDLLSLYNGKQPIFKNIKHAVNQNIEKTAVIAIHGILTKKPGAFDDFLGMTSYEKIQEEIE EALSNKDIETILLDIDSPGGEVNGIFDLADFIYESRAKKRIIAIANDDAYSAAYAIASSAEKVFVSRTSDLSYGLENR
Sequences:
>Translated_158_residues MKILQTNWLCRPMMIEQKSFDLLSLYNGKQPIFKNIKHAVNQNIEKTAVIAIHGILTKKPGAFDDFLGMTSYEKIQEEIE EALSNKDIETILLDIDSPGGEVNGIFDLADFIYESRAKKRIIAIANDDAYSAAYAIASSAEKVFVSRTSDLSYGLENR >Mature_158_residues MKILQTNWLCRPMMIEQKSFDLLSLYNGKQPIFKNIKHAVNQNIEKTAVIAIHGILTKKPGAFDDFLGMTSYEKIQEEIE EALSNKDIETILLDIDSPGGEVNGIFDLADFIYESRAKKRIIAIANDDAYSAAYAIASSAEKVFVSRTSDLSYGLENR
Specific function: Unknown
COG id: COG0616
COG function: function code OU; Periplasmic serine proteases (ClpP class)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.4.21.-
Molecular weight: Translated: 17725; Mature: 17725
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILQTNWLCRPMMIEQKSFDLLSLYNGKQPIFKNIKHAVNQNIEKTAVIAIHGILTKKP CCCCCCCCCCCCCEECCCCCCHHHHCCCCCHHHHHHHHHHCCCCCHHHEEEEEEHHCCCC GAFDDFLGMTSYEKIQEEIEEALSNKDIETILLDIDSPGGEVNGIFDLADFIYESRAKKR CCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCE IIAIANDDAYSAAYAIASSAEKVFVSRTSDLSYGLENR EEEEECCCHHHHHHHHHHCHHHEEEECCCCCCCCCCCC >Mature Secondary Structure MKILQTNWLCRPMMIEQKSFDLLSLYNGKQPIFKNIKHAVNQNIEKTAVIAIHGILTKKP CCCCCCCCCCCCCEECCCCCCHHHHCCCCCHHHHHHHHHHCCCCCHHHEEEEEEHHCCCC GAFDDFLGMTSYEKIQEEIEEALSNKDIETILLDIDSPGGEVNGIFDLADFIYESRAKKR CCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCE IIAIANDDAYSAAYAIASSAEKVFVSRTSDLSYGLENR EEEEECCCHHHHHHHHHHCHHHEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA