Definition Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome.
Accession NC_010981
Length 1,482,455

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The map label for this gene is 190570808

Identifier: 190570808

GI number: 190570808

Start: 398129

End: 398605

Strand: Reverse

Name: 190570808

Synonym: WPa_0374

Alternate gene names: NA

Gene position: 398605-398129 (Counterclockwise)

Preceding gene: 190570810

Following gene: 190570807

Centisome position: 26.89

GC content: 34.59

Gene sequence:

>477_bases
ATGAAAATTTTACAAACCAACTGGCTATGTAGGCCGATGATGATAGAGCAAAAAAGCTTTGACCTGTTGTCACTATATAA
CGGAAAACAACCTATCTTTAAAAATATAAAACATGCAGTAAATCAGAATATAGAAAAAACAGCAGTAATAGCAATACATG
GAATTTTGACCAAAAAACCAGGGGCTTTTGACGATTTTCTGGGAATGACATCATATGAGAAAATTCAAGAAGAAATAGAA
GAAGCATTATCAAACAAAGATATAGAAACTATTCTGCTTGATATAGATAGCCCCGGAGGAGAGGTAAACGGTATATTTGA
CCTAGCTGACTTTATTTATGAATCAAGAGCAAAAAAGAGGATAATAGCGATAGCAAATGATGATGCATACTCTGCTGCAT
ATGCTATAGCCTCTAGCGCTGAGAAGGTATTTGTGAGCAGAACTTCTGACCTCAGTTATGGATTAGAAAATAGATAA

Upstream 100 bases:

>100_bases
TTGACCAAGAAATAGCAGAAGATCAAAAGCGTGCTGATTCTCTCAACCTTTTCTTTGATTCTGATGTCAGGACACAAACA
AAATAAATCTCATTTACATT

Downstream 100 bases:

>100_bases
AAGTATAACTAAGAAGAGGGAAACAGGGTAAACTCGAGTATTTTAGTAATAATAAGAGGTTACCCATGAAGAAAGATATT
ACAGAACTGTACTGTTGCGT

Product: minor capsid protein c (fragment)

Products: NA

Alternate protein names: Serine Peptidase; S49 Family Peptidase; Peptidase S; Prophage LambdaW4 Minor Capsid Protein C; Prophage; Periplasmic Serine Proteases

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MKILQTNWLCRPMMIEQKSFDLLSLYNGKQPIFKNIKHAVNQNIEKTAVIAIHGILTKKPGAFDDFLGMTSYEKIQEEIE
EALSNKDIETILLDIDSPGGEVNGIFDLADFIYESRAKKRIIAIANDDAYSAAYAIASSAEKVFVSRTSDLSYGLENR

Sequences:

>Translated_158_residues
MKILQTNWLCRPMMIEQKSFDLLSLYNGKQPIFKNIKHAVNQNIEKTAVIAIHGILTKKPGAFDDFLGMTSYEKIQEEIE
EALSNKDIETILLDIDSPGGEVNGIFDLADFIYESRAKKRIIAIANDDAYSAAYAIASSAEKVFVSRTSDLSYGLENR
>Mature_158_residues
MKILQTNWLCRPMMIEQKSFDLLSLYNGKQPIFKNIKHAVNQNIEKTAVIAIHGILTKKPGAFDDFLGMTSYEKIQEEIE
EALSNKDIETILLDIDSPGGEVNGIFDLADFIYESRAKKRIIAIANDDAYSAAYAIASSAEKVFVSRTSDLSYGLENR

Specific function: Unknown

COG id: COG0616

COG function: function code OU; Periplasmic serine proteases (ClpP class)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.21.-

Molecular weight: Translated: 17725; Mature: 17725

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILQTNWLCRPMMIEQKSFDLLSLYNGKQPIFKNIKHAVNQNIEKTAVIAIHGILTKKP
CCCCCCCCCCCCCEECCCCCCHHHHCCCCCHHHHHHHHHHCCCCCHHHEEEEEEHHCCCC
GAFDDFLGMTSYEKIQEEIEEALSNKDIETILLDIDSPGGEVNGIFDLADFIYESRAKKR
CCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCE
IIAIANDDAYSAAYAIASSAEKVFVSRTSDLSYGLENR
EEEEECCCHHHHHHHHHHCHHHEEEECCCCCCCCCCCC
>Mature Secondary Structure
MKILQTNWLCRPMMIEQKSFDLLSLYNGKQPIFKNIKHAVNQNIEKTAVIAIHGILTKKP
CCCCCCCCCCCCCEECCCCCCHHHHCCCCCHHHHHHHHHHCCCCCHHHEEEEEEHHCCCC
GAFDDFLGMTSYEKIQEEIEEALSNKDIETILLDIDSPGGEVNGIFDLADFIYESRAKKR
CCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCE
IIAIANDDAYSAAYAIASSAEKVFVSRTSDLSYGLENR
EEEEECCCHHHHHHHHHHCHHHEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA