Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is 190570777
Identifier: 190570777
GI number: 190570777
Start: 353672
End: 354457
Strand: Direct
Name: 190570777
Synonym: WPa_0335
Alternate gene names: NA
Gene position: 353672-354457 (Clockwise)
Preceding gene: 190570776
Following gene: 190570778
Centisome position: 23.86
GC content: 36.01
Gene sequence:
>786_bases ATGCAGCAGCCAAATATTATCGAACCACTGAACTTTGAGGAAATATTTTTCAGAATGAAAGAAGAGTTAGTGAGTCGGGA TGCAAGCTTTACAGGATTGGTGGAAAGTGATCCAGCGATAAAGATTCTGGAGGTAGCAGCATGGCGAGAACTTTTGCTCA GACAAAGGATGAACGAAGCAGTAAAGAGTAATTTACTGAAATTTGCAAAGGGAGAAGATCTTGATAATTTGGCTGAATTT TATGGAGTAGAGAGAGAAAAAGAAGAAGAGGATGAAAGATTTAGAAAGAGGGTAAAAGCAAAAATAGCAGGTTGGTCAAC AGGAGGAAGTAAGGAATATTATAAATATCATGCACTGTCAGCAGATAGTAGAGTAAAAGATGCACTAGTAGAATCACCTA TACCAGGAAAAGTACAAATTTCAATCTTATCAACACAAACTGGCATATTGTCAGAAGAGCTACTAGAAATTGTAAAAAAG CAGGTTACTAGAGATGATATAAGGGTTTTAACAGATACAGTAACAGTAGTTGGTTGCAATATTACGGAAATAGATATTCA CAGCAGAATGAGCATAAGTCCTGTAATATCGAAGGAGGAAATCAAGAAGCAGTTTATTGAGAAGTTTGAATTAGCAAAAA GATTAGGGTGGAGTGTAACAAGATCGTGGATAATAGCGAATCTATTTGTAGATGGTGTAGAAAACGTAGAATTAATCGAG CCAAAAGAGGATGTTGTTGTGCTAGGTAATGAGTGTGCAAATTTGCGAAATTTAAAGATTGAGTAA
Upstream 100 bases:
>100_bases AGATAACAGAAGTAAAAGAAGGGAGAGTAACATTGAATTTAGAAGGTGTCTATCTTTCAGAAGGTAAGTTCATAAATATT AATGGAGTAGTTGTTTAAAA
Downstream 100 bases:
>100_bases TGCTATTACCCCCAAACGCGACAAAGCAAGAGCAAGCATTGGTTGATGCAATCGATTACAAAGTTGATCCAAGTTGCATC AGGAGATTTAAATTTAGTCT
Product: baseplate assembly protein GpJ
Products: NA
Alternate protein names: Baseplate Assembly Protein J; Phage Baseplate Assembly Protein; Baseplate J-Like Protein; Phage-Related Baseplate Assembly Protein; Phage Protein Gp; Bacteriophage Baseplate Assembly Protein J; Phage Baseplate J-Like Protein; Prophage LambdaW5 Baseplate Assembly Protein J; Phage Baseplate Assembly; Phage Baseplate Assembly Protein J; Pyocin R2_PP Baseplate/Tail Fiber Protein; GPJ Of Phage P2-Like; Phage Tail-Like Protein; Bacteriophage Protein; Prophage Baseplate Assembly Protein; Bacteriophage P2 Baseplate Assembly Protein GPJ; Baseplate Assembly Protein GpJ; Baseplate Assembly Protein J Prophage; Prophage LambdaW1 Baseplate Assembly Protein J; Phage Tail Protein; Bacteriophage Baseplate Assembly Protein
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MQQPNIIEPLNFEEIFFRMKEELVSRDASFTGLVESDPAIKILEVAAWRELLLRQRMNEAVKSNLLKFAKGEDLDNLAEF YGVEREKEEEDERFRKRVKAKIAGWSTGGSKEYYKYHALSADSRVKDALVESPIPGKVQISILSTQTGILSEELLEIVKK QVTRDDIRVLTDTVTVVGCNITEIDIHSRMSISPVISKEEIKKQFIEKFELAKRLGWSVTRSWIIANLFVDGVENVELIE PKEDVVVLGNECANLRNLKIE
Sequences:
>Translated_261_residues MQQPNIIEPLNFEEIFFRMKEELVSRDASFTGLVESDPAIKILEVAAWRELLLRQRMNEAVKSNLLKFAKGEDLDNLAEF YGVEREKEEEDERFRKRVKAKIAGWSTGGSKEYYKYHALSADSRVKDALVESPIPGKVQISILSTQTGILSEELLEIVKK QVTRDDIRVLTDTVTVVGCNITEIDIHSRMSISPVISKEEIKKQFIEKFELAKRLGWSVTRSWIIANLFVDGVENVELIE PKEDVVVLGNECANLRNLKIE >Mature_261_residues MQQPNIIEPLNFEEIFFRMKEELVSRDASFTGLVESDPAIKILEVAAWRELLLRQRMNEAVKSNLLKFAKGEDLDNLAEF YGVEREKEEEDERFRKRVKAKIAGWSTGGSKEYYKYHALSADSRVKDALVESPIPGKVQISILSTQTGILSEELLEIVKK QVTRDDIRVLTDTVTVVGCNITEIDIHSRMSISPVISKEEIKKQFIEKFELAKRLGWSVTRSWIIANLFVDGVENVELIE PKEDVVVLGNECANLRNLKIE
Specific function: Unknown
COG id: COG3948
COG function: function code R; Phage-related baseplate assembly protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29842; Mature: 29842
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQPNIIEPLNFEEIFFRMKEELVSRDASFTGLVESDPAIKILEVAAWRELLLRQRMNEA CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHH VKSNLLKFAKGEDLDNLAEFYGVEREKEEEDERFRKRVKAKIAGWSTGGSKEYYKYHALS HHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEECC ADSRVKDALVESPIPGKVQISILSTQTGILSEELLEIVKKQVTRDDIRVLTDTVTVVGCN CCHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHEEEECC ITEIDIHSRMSISPVISKEEIKKQFIEKFELAKRLGWSVTRSWIIANLFVDGVENVELIE EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEC PKEDVVVLGNECANLRNLKIE CCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure MQQPNIIEPLNFEEIFFRMKEELVSRDASFTGLVESDPAIKILEVAAWRELLLRQRMNEA CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHH VKSNLLKFAKGEDLDNLAEFYGVEREKEEEDERFRKRVKAKIAGWSTGGSKEYYKYHALS HHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEECC ADSRVKDALVESPIPGKVQISILSTQTGILSEELLEIVKKQVTRDDIRVLTDTVTVVGCN CCHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHEEEECC ITEIDIHSRMSISPVISKEEIKKQFIEKFELAKRLGWSVTRSWIIANLFVDGVENVELIE EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEC PKEDVVVLGNECANLRNLKIE CCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA