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The map label for this gene is 190570719

Identifier: 190570719

GI number: 190570719

Start: 275981

End: 276904

Strand: Direct

Name: 190570719

Synonym: WPa_0272

Alternate gene names: NA

Gene position: 275981-276904 (Clockwise)

Preceding gene: 190570717

Following gene: 190570728

Centisome position: 18.62

GC content: 35.06

Gene sequence:

>924_bases
ATGGCAAAATACATCCTTTCAGTTGACGGCGGAGGCATAAGAGGCATCATACCAGCCATAATATTAGCAGAAATAGAAAA
AAGAACAAGAAGAACTATAGCTGAAATCTTTGATTTAGTGGCAGGAACCTCAACCGGTGGGATTGTTGTAGCGGGATTAT
GTAGAAAAGATGAACGAGGAAATCCCCAATACTCAGCCAACGACCTAGTTGAGTTTTACCAAAAGTACGGAGCATATATT
TTTAAATCTTCATTTTTGAGAAGATCAATATTTTCTTGGCTTAATTGCGCACAATACCCACATAAAAATATTGAATTTGT
ACTGGATAAATATTTTGGTGATTCTACTCTTGCAGATGCAACAAATAATTTAATGCTTACAAGCTATGATATTAAGAACA
ATTATCCCTTCTTCTTTAAAAATTGGAGAGAAGATAGAAATTTTATCAAATTGAAAGATGCATTACGAGCTACAACTGCA
GCACCTACTTACTTTGCACCTAAATATCTTAAAATCAACCACAAGGAAATGGTACTAGTGGATGGCGGGGTGTTTGCCAA
TAATCCAGCGGCTTGTGCATATGCAAGTGCTAAGAGGTTATTTCCAAATGATGAGATTATACTGTTATCAATTGGAACTG
GCAGGACAGATAGAAGCATAGCTAATTCAAGAAGATTAGGAAAAATAGGCTGGATAAAACCACTATTACATGTGATGTTT
GCCTCAAGTTTAGATTCAGTAAATTACCAACTTGATCAAGTTATAGGTGATAAATATATACGCATACAATCGCAATTGAA
GCTAGCGTCGGCTGACATGGATAACATTACATCAAAAAATATCAAATCTCTTCAACAAGAGGCAAAGGCAATGATAGAGG
ACAATCAGAAAGTGATAGAAAAATTCTGTAATATTATATCTTGA

Upstream 100 bases:

>100_bases
ATTTGTTCGGCACAATTTTCCCTAGGTGTAAAACAGACTGTAGTTTTTGGACAGGTAACACACCCTGATAAAAGTGAGCA
AGTTAATAAAATCAATAAAT

Downstream 100 bases:

>100_bases
TACGTCAAATTCTGCAGAGCTAAATAAGGATTTAGAATAGATAATATATTAACCATTTTTACTTATATCTTAAACACAAT
TCAATTTTTACACTCATCAG

Product: patatin family protein

Products: NA

Alternate protein names: Patatin Family Protein; Patatin-Like Phospholipase; Patatin-Like Protein; Phospholipase Patatin Family; Patatin-Related Protein; Patatin-Like Phospholipase Family

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MAKYILSVDGGGIRGIIPAIILAEIEKRTRRTIAEIFDLVAGTSTGGIVVAGLCRKDERGNPQYSANDLVEFYQKYGAYI
FKSSFLRRSIFSWLNCAQYPHKNIEFVLDKYFGDSTLADATNNLMLTSYDIKNNYPFFFKNWREDRNFIKLKDALRATTA
APTYFAPKYLKINHKEMVLVDGGVFANNPAACAYASAKRLFPNDEIILLSIGTGRTDRSIANSRRLGKIGWIKPLLHVMF
ASSLDSVNYQLDQVIGDKYIRIQSQLKLASADMDNITSKNIKSLQQEAKAMIEDNQKVIEKFCNIIS

Sequences:

>Translated_307_residues
MAKYILSVDGGGIRGIIPAIILAEIEKRTRRTIAEIFDLVAGTSTGGIVVAGLCRKDERGNPQYSANDLVEFYQKYGAYI
FKSSFLRRSIFSWLNCAQYPHKNIEFVLDKYFGDSTLADATNNLMLTSYDIKNNYPFFFKNWREDRNFIKLKDALRATTA
APTYFAPKYLKINHKEMVLVDGGVFANNPAACAYASAKRLFPNDEIILLSIGTGRTDRSIANSRRLGKIGWIKPLLHVMF
ASSLDSVNYQLDQVIGDKYIRIQSQLKLASADMDNITSKNIKSLQQEAKAMIEDNQKVIEKFCNIIS
>Mature_306_residues
AKYILSVDGGGIRGIIPAIILAEIEKRTRRTIAEIFDLVAGTSTGGIVVAGLCRKDERGNPQYSANDLVEFYQKYGAYIF
KSSFLRRSIFSWLNCAQYPHKNIEFVLDKYFGDSTLADATNNLMLTSYDIKNNYPFFFKNWREDRNFIKLKDALRATTAA
PTYFAPKYLKINHKEMVLVDGGVFANNPAACAYASAKRLFPNDEIILLSIGTGRTDRSIANSRRLGKIGWIKPLLHVMFA
SSLDSVNYQLDQVIGDKYIRIQSQLKLASADMDNITSKNIKSLQQEAKAMIEDNQKVIEKFCNIIS

Specific function: Unknown

COG id: COG3621

COG function: function code R; Patatin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI48525351, Length=325, Percent_Identity=26.1538461538462, Blast_Score=93, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17544092, Length=317, Percent_Identity=26.4984227129338, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17551040, Length=241, Percent_Identity=28.2157676348548, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17567809, Length=199, Percent_Identity=29.1457286432161, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34631; Mature: 34500

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKYILSVDGGGIRGIIPAIILAEIEKRTRRTIAEIFDLVAGTSTGGIVVAGLCRKDERG
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC
NPQYSANDLVEFYQKYGAYIFKSSFLRRSIFSWLNCAQYPHKNIEFVLDKYFGDSTLADA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHC
TNNLMLTSYDIKNNYPFFFKNWREDRNFIKLKDALRATTAAPTYFAPKYLKINHKEMVLV
CCCEEEEEEECCCCCCHHHHCCCCCCCEEHHHHHHHHHHCCCCCCCCCEEEECCCEEEEE
DGGVFANNPAACAYASAKRLFPNDEIILLSIGTGRTDRSIANSRRLGKIGWIKPLLHVMF
ECCEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHH
ASSLDSVNYQLDQVIGDKYIRIQSQLKLASADMDNITSKNIKSLQQEAKAMIEDNQKVIE
HHHHHHHHHHHHHHHCCHHEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
KFCNIIS
HHHHHCC
>Mature Secondary Structure 
AKYILSVDGGGIRGIIPAIILAEIEKRTRRTIAEIFDLVAGTSTGGIVVAGLCRKDERG
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC
NPQYSANDLVEFYQKYGAYIFKSSFLRRSIFSWLNCAQYPHKNIEFVLDKYFGDSTLADA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHC
TNNLMLTSYDIKNNYPFFFKNWREDRNFIKLKDALRATTAAPTYFAPKYLKINHKEMVLV
CCCEEEEEEECCCCCCHHHHCCCCCCCEEHHHHHHHHHHCCCCCCCCCEEEECCCEEEEE
DGGVFANNPAACAYASAKRLFPNDEIILLSIGTGRTDRSIANSRRLGKIGWIKPLLHVMF
ECCEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHH
ASSLDSVNYQLDQVIGDKYIRIQSQLKLASADMDNITSKNIKSLQQEAKAMIEDNQKVIE
HHHHHHHHHHHHHHHCCHHEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
KFCNIIS
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA