| Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
|---|---|
| Accession | NC_010981 |
| Length | 1,482,455 |
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The map label for this gene is 190570689
Identifier: 190570689
GI number: 190570689
Start: 249946
End: 250506
Strand: Reverse
Name: 190570689
Synonym: WPa_0241
Alternate gene names: NA
Gene position: 250506-249946 (Counterclockwise)
Preceding gene: 190570690
Following gene: 190570687
Centisome position: 16.9
GC content: 33.16
Gene sequence:
>561_bases ATGAGTAGTTATATTTCTTGGGCAAAAAACTTAGCAGCTAGCACTTTTTCTATAATTCCTGGATTACCTGCTCAATATAA CATTGCAGACAAGAATAATGTAAAAAGTGATAATAAAAACATACCACAAAGTACATCATCTGTTGGTTGGAATAAATTCC TAAATAATGAAAATATTGCCCTTGCGAGTTGTGTTGCCGATGCATTAGATAATACTCCAAGTAGGCGCTATCAAGATTTA ATGAGTAAAGGAGTAGAAGTTGTGCCAAGCAGAAGAGTTGCAGTTGAATTTGCTCTGAAAAAATTTAATTCATTTGTAGA AGATAAAATAAGAAACCTAGATTCAAAAGAACAAGCGAGAATACGTGTTGAACTTAAAGATGCATATCCAGAAATAACAG CAAGTCTTGAAAGAGGAGTTGAATTTAGTGGTAATGTTGGGTTAGATAATGTTTTAGAAAAGTGCAAGAAGTGCTTTTGT ACAAATGTTCTACCAAAGGAAGTATCAACTTGTCTTTCTGATATAGGAGTAACCAAACTTGAAGGTAATCTCAATAGGTA G
Upstream 100 bases:
>100_bases AGATCATAATTCTCATCACTTATCACACCAGCCTCGTACTATAGATTCAAGTAATAAATCTGAAATAGCGGCAAGTAGTG GCATAAGACCATCTTCATGG
Downstream 100 bases:
>100_bases GTTATAATATAAGAAGTGGAGCTATAATATGCCAAGTTGTGGAAAATTTAAAGTGAAGGTGGCAAAATTAGCCACAAAAT AATTAGGTATACCAGTAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MSSYISWAKNLAASTFSIIPGLPAQYNIADKNNVKSDNKNIPQSTSSVGWNKFLNNENIALASCVADALDNTPSRRYQDL MSKGVEVVPSRRVAVEFALKKFNSFVEDKIRNLDSKEQARIRVELKDAYPEITASLERGVEFSGNVGLDNVLEKCKKCFC TNVLPKEVSTCLSDIGVTKLEGNLNR
Sequences:
>Translated_186_residues MSSYISWAKNLAASTFSIIPGLPAQYNIADKNNVKSDNKNIPQSTSSVGWNKFLNNENIALASCVADALDNTPSRRYQDL MSKGVEVVPSRRVAVEFALKKFNSFVEDKIRNLDSKEQARIRVELKDAYPEITASLERGVEFSGNVGLDNVLEKCKKCFC TNVLPKEVSTCLSDIGVTKLEGNLNR >Mature_185_residues SSYISWAKNLAASTFSIIPGLPAQYNIADKNNVKSDNKNIPQSTSSVGWNKFLNNENIALASCVADALDNTPSRRYQDLM SKGVEVVPSRRVAVEFALKKFNSFVEDKIRNLDSKEQARIRVELKDAYPEITASLERGVEFSGNVGLDNVLEKCKKCFCT NVLPKEVSTCLSDIGVTKLEGNLNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20597; Mature: 20465
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSYISWAKNLAASTFSIIPGLPAQYNIADKNNVKSDNKNIPQSTSSVGWNKFLNNENIA CCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHH LASCVADALDNTPSRRYQDLMSKGVEVVPSRRVAVEFALKKFNSFVEDKIRNLDSKEQAR HHHHHHHHHCCCHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHE IRVELKDAYPEITASLERGVEFSGNVGLDNVLEKCKKCFCTNVLPKEVSTCLSDIGVTKL EEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEC EGNLNR CCCCCC >Mature Secondary Structure SSYISWAKNLAASTFSIIPGLPAQYNIADKNNVKSDNKNIPQSTSSVGWNKFLNNENIA CHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHH LASCVADALDNTPSRRYQDLMSKGVEVVPSRRVAVEFALKKFNSFVEDKIRNLDSKEQAR HHHHHHHHHCCCHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHE IRVELKDAYPEITASLERGVEFSGNVGLDNVLEKCKKCFCTNVLPKEVSTCLSDIGVTKL EEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEC EGNLNR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA