| Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
|---|---|
| Accession | NC_010981 |
| Length | 1,482,455 |
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The map label for this gene is 190570669
Identifier: 190570669
GI number: 190570669
Start: 224918
End: 227716
Strand: Reverse
Name: 190570669
Synonym: WPa_0219
Alternate gene names: NA
Gene position: 227716-224918 (Counterclockwise)
Preceding gene: 190570676
Following gene: 190570668
Centisome position: 15.36
GC content: 34.16
Gene sequence:
>2799_bases GTGGGAAGAGTTTTTACTGTTAATGTGAATGAGTCCCTTTTTGATGTGCTGGTTCAGCACATATTTTCTGAATATGAAAG AGAAAAAATTCCCGAGATAAAGATCATACTTCCCTGCAAGAGGGATGTTATAGCATTGCTGAGTGCATTCAAGAATTACA GAACTATAATTTTGCCAGAGATAGTTTCACTAGAAAACATTGATGAAGAAGATTTAATATTAAATCTTGATAGAGTTAAA GTTATCAACCCAACAAAAAGAACACTGCTACTCATTCAATTTATATTGGAGTGGAATAAAAAAAACAATGATAATTTTCC AATCGATCTGGTTTACAGTTTGCCGTCATTGCTTCAATATACCCAAATAGAGGGTGATTATCAACTTGATGAGCACTCAA AAAAAGTAGCGAATTTCATAAATTTACTTATCAAAACTTGGAGTAAAACTTTAAAAGGTTTGGGAGTAATAGATATACTA AAGCATAAGAATGACTACATAAACAATATGATAAACTTCCTGCAGAAAGATCAGCATATGATCTTTATTGGAATTGGAAA GGGTGAAATCTACAAGTTATTGATTAAGGCTATATATGACCTGCCATTTGGAAAGATAATTCTACCTAACCTGAATTTGA AAATGAACGAAAAAGATTGGAAATCACTTGATAAAAAACACTATCAACATTGCCTGAAAGATTTACTCGATTATTTAAAA GTGGATAGAAGGGATGTTAGTTTTCTGTCAGAAGCGTGTTCTGGTGTCATCCCAGTGTCAAGCACTGGGATGACAGAAGA AAGGGCTGGGATAACAGGAAGTCCTGAGGAATATCTTGATTATATCTTCGATACAACTGCTGATCTAAGTGAAGTTGGTG GCGGATCAATTGAAAATATTGAAGTCATCACTTGTGATTCAAGGGAGGAAGAAGCACAAGTGACGTCACTAATTATAAAG AATGAAGGTTATGAAAACGCTTCTTTGTTTGTCTTTGATAAATTACTTGCAGATCGTATGGCGTGTACCATATCGGAAAA CTATTCTTATGTGACGCTTCTGCTTTATAGTATTGAGATTTTGAACTCAAAATGGAACGGTGTGGCATTGCTTTCTCTTC TTAAACATAGGCTAGTGACTTTTGGTTACGCTCAAGAAGAGTACACTCGTATTTTATCTGAGTTTGAGATAGAAGTATTG CGTAGCTTTAATACAAATGGTCTTAAGGATATTATTAACGCTATTAATACTTGTAAAAAGCTAAGACATAAAGAAGATAT ATTAATTATTATCAGTAAGTTAAAGATTATATTTAATCCTTTACTGTATCTTGTAAATTATCCCATTTTTGATGTGGCAT CAGCTCATTTGCAGTGTGTTAATGTCCTTTCTAATATCAATTTTTTAGAGCTAAATGGTGAAATAGGTAATTTTACTCGT GATTTCTTAAATGCATGTGAAGATGTAGCAATAAAATGCTCCTTAGAGTTATATAGCCAAATCCTGATATTATTTTTAAA AAGGAAGTTTTTTTCTCCAGAAAATAACTTAGATAAATTCAGCTTATATCACAATAAGGTTGTAGTACTTGCTGGATTTA ATGATATACCAAATTTTCAGAATCCGTTTTTGAGTGCACTGAATAGAGAAAAATTTAACCTTCCTTCTGTGCAAGAAGAG CAAGGGTACTTTTTGTATACTTTGCGCAATTTATTTGGTGCCGGCAAGGTTTATATTACGAGGCTAGTGAGTGATAGAAA ATCAATTCTATTGCGCCGTTTGGAAGTTCTGTTACAAGAACCAAAATATCCTTATCGCAATTGGCTAAGAATATTAAATA CACCTGAGTGCATTGTTCCATGTACTCAGCCTATGCCAAAACCTAAAACTGAAGTGAGGCAAGCAAAAATGCAAGTGATG TCTTGCAGTGCGGTAGAAAAACTGATTCGTAACCCTTATTCATTTTATGTTGAATACATACTGAACCTTAGACAGTTGAA AGACTTAAATTTTAAGCCATCGATATTGGAGTTTGGCACTATGGTACACAATATTCTTGCAAGATATTTACGCAACGAAA AGTCGCTGATGAATATTGCACGAGAAATATTCTCGTCTAATCGATTCCACTTTTCAAATATGTGGTGGGTAAGGTTGCAG AGGATAATTCAATCTTTTGTTGAGCTTGATAGGACTGGAAACAATCAAGTTGAGTTGGAGAAGAGCTTTTCCTATCCGAT ATTTCATATTCCAGCGCGTGACACACAACTGCGCGGATGCTGTACAACTTCCACTAAGAATAAGGGTGTCATCCCAGTGC TTGACTACTTGGATCCAAAAAATTTGATTGCAAATGAACACACCAGACAATTGTGTAATAAGAGCTGGTCAGATACTCGA ATGACAGAAGAAATTTTATTGACAGCAAGATGTGATAGAGTTGAGTATCTACCAGGTGGGCAAGTAGCAATTATAGACTA TAAACTTGGTTCACCACCTTCCAATGAGGAAGTTATGTCAGGATTTTTCCCGCAATTAATTTTACAAGCTTTAGCAGTGG AATACACAACAAAAAAAGAAGTCTCGGAGCTTGCTTATTGGAAACTTGATTATGATAAAATAAAGGTTATTGCTTTGAAA GATTATAGACAAAAAATGCATGAATTTCAGAATATTCTACCAGATTTCTTATCTAATTATTTAAGAGATACTACTCCCTT CATTGCCTCTCCTTATTTTGATAAATTCCTGAGATTTAACATCTACAAACAACTAGAAAGGATAGGGGAGTGGTTATAA
Upstream 100 bases:
>100_bases GTGAAAGACTTTAATATATCATAGCATAAGAAACTGCGAGCACATTTATATTTTAAATAATTTCTATACAATAAAAGTGT TGTATTAATTGTTACTGTTA
Downstream 100 bases:
>100_bases ATTATATCTCCTCTCATCCAGATCAAAATAGCTGGTTGTACAGCTGGTTTACTAAGTGCAGTAGGAGAATTACTAGATTG TGATATAGACTCATCTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Double-Strand Break Repair Protein; Nuclease; RecB Exonuclease
Number of amino acids: Translated: 932; Mature: 931
Protein sequence:
>932_residues MGRVFTVNVNESLFDVLVQHIFSEYEREKIPEIKIILPCKRDVIALLSAFKNYRTIILPEIVSLENIDEEDLILNLDRVK VINPTKRTLLLIQFILEWNKKNNDNFPIDLVYSLPSLLQYTQIEGDYQLDEHSKKVANFINLLIKTWSKTLKGLGVIDIL KHKNDYINNMINFLQKDQHMIFIGIGKGEIYKLLIKAIYDLPFGKIILPNLNLKMNEKDWKSLDKKHYQHCLKDLLDYLK VDRRDVSFLSEACSGVIPVSSTGMTEERAGITGSPEEYLDYIFDTTADLSEVGGGSIENIEVITCDSREEEAQVTSLIIK NEGYENASLFVFDKLLADRMACTISENYSYVTLLLYSIEILNSKWNGVALLSLLKHRLVTFGYAQEEYTRILSEFEIEVL RSFNTNGLKDIINAINTCKKLRHKEDILIIISKLKIIFNPLLYLVNYPIFDVASAHLQCVNVLSNINFLELNGEIGNFTR DFLNACEDVAIKCSLELYSQILILFLKRKFFSPENNLDKFSLYHNKVVVLAGFNDIPNFQNPFLSALNREKFNLPSVQEE QGYFLYTLRNLFGAGKVYITRLVSDRKSILLRRLEVLLQEPKYPYRNWLRILNTPECIVPCTQPMPKPKTEVRQAKMQVM SCSAVEKLIRNPYSFYVEYILNLRQLKDLNFKPSILEFGTMVHNILARYLRNEKSLMNIAREIFSSNRFHFSNMWWVRLQ RIIQSFVELDRTGNNQVELEKSFSYPIFHIPARDTQLRGCCTTSTKNKGVIPVLDYLDPKNLIANEHTRQLCNKSWSDTR MTEEILLTARCDRVEYLPGGQVAIIDYKLGSPPSNEEVMSGFFPQLILQALAVEYTTKKEVSELAYWKLDYDKIKVIALK DYRQKMHEFQNILPDFLSNYLRDTTPFIASPYFDKFLRFNIYKQLERIGEWL
Sequences:
>Translated_932_residues MGRVFTVNVNESLFDVLVQHIFSEYEREKIPEIKIILPCKRDVIALLSAFKNYRTIILPEIVSLENIDEEDLILNLDRVK VINPTKRTLLLIQFILEWNKKNNDNFPIDLVYSLPSLLQYTQIEGDYQLDEHSKKVANFINLLIKTWSKTLKGLGVIDIL KHKNDYINNMINFLQKDQHMIFIGIGKGEIYKLLIKAIYDLPFGKIILPNLNLKMNEKDWKSLDKKHYQHCLKDLLDYLK VDRRDVSFLSEACSGVIPVSSTGMTEERAGITGSPEEYLDYIFDTTADLSEVGGGSIENIEVITCDSREEEAQVTSLIIK NEGYENASLFVFDKLLADRMACTISENYSYVTLLLYSIEILNSKWNGVALLSLLKHRLVTFGYAQEEYTRILSEFEIEVL RSFNTNGLKDIINAINTCKKLRHKEDILIIISKLKIIFNPLLYLVNYPIFDVASAHLQCVNVLSNINFLELNGEIGNFTR DFLNACEDVAIKCSLELYSQILILFLKRKFFSPENNLDKFSLYHNKVVVLAGFNDIPNFQNPFLSALNREKFNLPSVQEE QGYFLYTLRNLFGAGKVYITRLVSDRKSILLRRLEVLLQEPKYPYRNWLRILNTPECIVPCTQPMPKPKTEVRQAKMQVM SCSAVEKLIRNPYSFYVEYILNLRQLKDLNFKPSILEFGTMVHNILARYLRNEKSLMNIAREIFSSNRFHFSNMWWVRLQ RIIQSFVELDRTGNNQVELEKSFSYPIFHIPARDTQLRGCCTTSTKNKGVIPVLDYLDPKNLIANEHTRQLCNKSWSDTR MTEEILLTARCDRVEYLPGGQVAIIDYKLGSPPSNEEVMSGFFPQLILQALAVEYTTKKEVSELAYWKLDYDKIKVIALK DYRQKMHEFQNILPDFLSNYLRDTTPFIASPYFDKFLRFNIYKQLERIGEWL >Mature_931_residues GRVFTVNVNESLFDVLVQHIFSEYEREKIPEIKIILPCKRDVIALLSAFKNYRTIILPEIVSLENIDEEDLILNLDRVKV INPTKRTLLLIQFILEWNKKNNDNFPIDLVYSLPSLLQYTQIEGDYQLDEHSKKVANFINLLIKTWSKTLKGLGVIDILK HKNDYINNMINFLQKDQHMIFIGIGKGEIYKLLIKAIYDLPFGKIILPNLNLKMNEKDWKSLDKKHYQHCLKDLLDYLKV DRRDVSFLSEACSGVIPVSSTGMTEERAGITGSPEEYLDYIFDTTADLSEVGGGSIENIEVITCDSREEEAQVTSLIIKN EGYENASLFVFDKLLADRMACTISENYSYVTLLLYSIEILNSKWNGVALLSLLKHRLVTFGYAQEEYTRILSEFEIEVLR SFNTNGLKDIINAINTCKKLRHKEDILIIISKLKIIFNPLLYLVNYPIFDVASAHLQCVNVLSNINFLELNGEIGNFTRD FLNACEDVAIKCSLELYSQILILFLKRKFFSPENNLDKFSLYHNKVVVLAGFNDIPNFQNPFLSALNREKFNLPSVQEEQ GYFLYTLRNLFGAGKVYITRLVSDRKSILLRRLEVLLQEPKYPYRNWLRILNTPECIVPCTQPMPKPKTEVRQAKMQVMS CSAVEKLIRNPYSFYVEYILNLRQLKDLNFKPSILEFGTMVHNILARYLRNEKSLMNIAREIFSSNRFHFSNMWWVRLQR IIQSFVELDRTGNNQVELEKSFSYPIFHIPARDTQLRGCCTTSTKNKGVIPVLDYLDPKNLIANEHTRQLCNKSWSDTRM TEEILLTARCDRVEYLPGGQVAIIDYKLGSPPSNEEVMSGFFPQLILQALAVEYTTKKEVSELAYWKLDYDKIKVIALKD YRQKMHEFQNILPDFLSNYLRDTTPFIASPYFDKFLRFNIYKQLERIGEWL
Specific function: Unknown
COG id: COG2887
COG function: function code L; RecB family exonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 108441; Mature: 108310
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRVFTVNVNESLFDVLVQHIFSEYEREKIPEIKIILPCKRDVIALLSAFKNYRTIILPE CCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCEEECHH IVSLENIDEEDLILNLDRVKVINPTKRTLLLIQFILEWNKKNNDNFPIDLVYSLPSLLQY HHHHCCCCCCHHEEEECCEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHH TQIEGDYQLDEHSKKVANFINLLIKTWSKTLKGLGVIDILKHKNDYINNMINFLQKDQHM HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHCCCCE IFIGIGKGEIYKLLIKAIYDLPFGKIILPNLNLKMNEKDWKSLDKKHYQHCLKDLLDYLK EEEECCCHHHHHHHHHHHHHCCCCCEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH VDRRDVSFLSEACSGVIPVSSTGMTEERAGITGSPEEYLDYIFDTTADLSEVGGGSIENI CCCHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCE EVITCDSREEEAQVTSLIIKNEGYENASLFVFDKLLADRMACTISENYSYVTLLLYSIEI EEEECCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHH LNSKWNGVALLSLLKHRLVTFGYAQEEYTRILSEFEIEVLRSFNTNGLKDIINAINTCKK HCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LRHKEDILIIISKLKIIFNPLLYLVNYPIFDVASAHLQCVNVLSNINFLELNGEIGNFTR HHCCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHH DFLNACEDVAIKCSLELYSQILILFLKRKFFSPENNLDKFSLYHNKVVVLAGFNDIPNFQ HHHHHHHHHEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEEECCCCCCCCC NPFLSALNREKFNLPSVQEEQGYFLYTLRNLFGAGKVYITRLVSDRKSILLRRLEVLLQE CHHHHHHCCCCCCCCCCCCCCCEEHEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC PKYPYRNWLRILNTPECIVPCTQPMPKPKTEVRQAKMQVMSCSAVEKLIRNPYSFYVEYI CCCCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH LNLRQLKDLNFKPSILEFGTMVHNILARYLRNEKSLMNIAREIFSSNRFHFSNMWWVRLQ HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEECHHHHHHHH RIIQSFVELDRTGNNQVELEKSFSYPIFHIPARDTQLRGCCTTSTKNKGVIPVLDYLDPK HHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCCCCCCCEEECCCCCCCCEEEHHCCCCH NLIANEHTRQLCNKSWSDTRMTEEILLTARCDRVEYLPGGQVAIIDYKLGSPPSNEEVMS HHHCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEECCCCCEEEEEEECCCCCCCHHHHH GFFPQLILQALAVEYTTKKEVSELAYWKLDYDKIKVIALKDYRQKMHEFQNILPDFLSNY HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH LRDTTPFIASPYFDKFLRFNIYKQLERIGEWL HHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GRVFTVNVNESLFDVLVQHIFSEYEREKIPEIKIILPCKRDVIALLSAFKNYRTIILPE CCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCEEECHH IVSLENIDEEDLILNLDRVKVINPTKRTLLLIQFILEWNKKNNDNFPIDLVYSLPSLLQY HHHHCCCCCCHHEEEECCEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHH TQIEGDYQLDEHSKKVANFINLLIKTWSKTLKGLGVIDILKHKNDYINNMINFLQKDQHM HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHCCCCE IFIGIGKGEIYKLLIKAIYDLPFGKIILPNLNLKMNEKDWKSLDKKHYQHCLKDLLDYLK EEEECCCHHHHHHHHHHHHHCCCCCEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH VDRRDVSFLSEACSGVIPVSSTGMTEERAGITGSPEEYLDYIFDTTADLSEVGGGSIENI CCCHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCE EVITCDSREEEAQVTSLIIKNEGYENASLFVFDKLLADRMACTISENYSYVTLLLYSIEI EEEECCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHH LNSKWNGVALLSLLKHRLVTFGYAQEEYTRILSEFEIEVLRSFNTNGLKDIINAINTCKK HCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LRHKEDILIIISKLKIIFNPLLYLVNYPIFDVASAHLQCVNVLSNINFLELNGEIGNFTR HHCCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHH DFLNACEDVAIKCSLELYSQILILFLKRKFFSPENNLDKFSLYHNKVVVLAGFNDIPNFQ HHHHHHHHHEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEEECCCCCCCCC NPFLSALNREKFNLPSVQEEQGYFLYTLRNLFGAGKVYITRLVSDRKSILLRRLEVLLQE CHHHHHHCCCCCCCCCCCCCCCEEHEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC PKYPYRNWLRILNTPECIVPCTQPMPKPKTEVRQAKMQVMSCSAVEKLIRNPYSFYVEYI CCCCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH LNLRQLKDLNFKPSILEFGTMVHNILARYLRNEKSLMNIAREIFSSNRFHFSNMWWVRLQ HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEECHHHHHHHH RIIQSFVELDRTGNNQVELEKSFSYPIFHIPARDTQLRGCCTTSTKNKGVIPVLDYLDPK HHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCCCCCCCEEECCCCCCCCEEEHHCCCCH NLIANEHTRQLCNKSWSDTRMTEEILLTARCDRVEYLPGGQVAIIDYKLGSPPSNEEVMS HHHCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEECCCCCEEEEEEECCCCCCCHHHHH GFFPQLILQALAVEYTTKKEVSELAYWKLDYDKIKVIALKDYRQKMHEFQNILPDFLSNY HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH LRDTTPFIASPYFDKFLRFNIYKQLERIGEWL HHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA