Definition | Chlorobium phaeobacteroides BS1 chromosome, complete genome. |
---|---|
Accession | NC_010831 |
Length | 2,736,403 |
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The map label for this gene is sglT [H]
Identifier: 189499241
GI number: 189499241
Start: 253671
End: 255077
Strand: Reverse
Name: sglT [H]
Synonym: Cphamn1_0261
Alternate gene names: 189499241
Gene position: 255077-253671 (Counterclockwise)
Preceding gene: 189499242
Following gene: 189499240
Centisome position: 9.32
GC content: 51.03
Gene sequence:
>1407_bases ATGCAGACGCTCGATCTCATCATCATCATAGGCTTCCTTGCCGCAATGGCCGGATACGGGATCTGGCAGGGACACACCAA CCGGACTACCGGTGATTACTTCCTCGGGGGGCGCAACCTCCCCTGGATCGTCGCCATGTTTTCCATTGTTGCCACTGAAA CTTCGGTACTGACTTTCGTCAGCATCCCAGGTATAGCGTTCAGGGGTGACTGGACTTTTCTGCAGCTCGCTATGGGTTAT ATCATCGGCAGAATGCTGGTCAGCGCTGTGCTGCTTCCGATCTACTTCCGTCAAGGAGTCAGCTCGATTTATGAAGTAAT CGGAAACCGTTTCGGCCCTCACATGCAAAAACTTGCCTCAACTGTTTTTCTGGTCACCAGAATTTTAGCTGACGGGGTAA GGTTCCTTGCTACTGCTGTGGTCGTTGAAGCGGTAACCGGATGGTCCCTCTCAGCCTCGGTACTCATTATCGGTATCGTC ACACTGGTTTATACGCTGTCGGGAGGAATACGAACAATCGTCTGGATCGACAGCATCCAGTTCGTCCTATATTTTGTCGG CGGAATTATCACCATTGCGTTTATCGCCGCAAACCTCGATGTCGGACTACCCGAAGCGTTGGGAGCCCTTGCCAACGAAG GCAAGCTGAAAGTGATCAATCATGACTGGCGCCTCTTTTCAGAGCCCTGGGCTTTCTTCAGCGCACTTACAGGAGGTATA CTCCTTTCATTCGCGTCACATGGAGTTGACTATATGATGGTACAGCGCGTGCTCGGCTGCAAAAACCTCAGCGCGGCAAG AAAAGCGATGATCGGAAGCGGATTTTTTGTATTCATTCAGTTCACTGTATTCCTGCTTGCCGGCTCGCTGATCTATCTTT TTATCGGAGATGTTCAGATTGAAAAAGACCGTGAGTTCGCCTCTTTCATTGTCAACCACCTGCCTGTCGGCCTGAAAGGC CTCCTGCTCGCAGGCGTGCTTTCGGCCGCAATGTCAACACTCAGCTCTTCAATTAACTCACTCGCTTCATCGACGGTAAC CGATCTGCTGGGGGGCAACGCTTCACTGAAACGCTCCAGGTTGATAAGCCTCGGATGGGCAGCCGTACTCATCAGCATAG CACTGGTATTTGATGAAAGCGACAACGCAATTGTCGTGCTGGGCCTTAAAATCGCATCTTTTACCTACGGAGGACTGCTC GGCCTTTTCCTCCTTTCCGTTAGCGGCAAAGAGTTTCATGTTTTCAGCCTCTCGATGGGGCTGATAGCCGGGATGGGCAC AGTATTCGTGCTGGATTATCTGACCTTTGCATGGACCTGGTACATAGCCGCCTCAGTCCTTGCCAACCTGCTTGTAGTCT GGATTACCGAGACTGTTTTGAATAACAGTTTCATAAGACGATCGTAA
Upstream 100 bases:
>100_bases AGCGGAAATCAGAGCATCATGGGCGGATGATGAACAGGAGTTTCTGTCCATCAAGCAGAACTATCATCTCTATCATTAAT TCATTCCCGTAACTTACCGT
Downstream 100 bases:
>100_bases AACACCTGATCTCGAAAGAATCTTTTTGTTCTAAAAAAATAATTCTATAGATTCCTATAAGGGAATTAAACTATTTAGCA TCAGAAAAAGCAGGAGTTTC
Product: Na+/solute symporter
Products: NA
Alternate protein names: Na(+)/glucose symporter [H]
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MQTLDLIIIIGFLAAMAGYGIWQGHTNRTTGDYFLGGRNLPWIVAMFSIVATETSVLTFVSIPGIAFRGDWTFLQLAMGY IIGRMLVSAVLLPIYFRQGVSSIYEVIGNRFGPHMQKLASTVFLVTRILADGVRFLATAVVVEAVTGWSLSASVLIIGIV TLVYTLSGGIRTIVWIDSIQFVLYFVGGIITIAFIAANLDVGLPEALGALANEGKLKVINHDWRLFSEPWAFFSALTGGI LLSFASHGVDYMMVQRVLGCKNLSAARKAMIGSGFFVFIQFTVFLLAGSLIYLFIGDVQIEKDREFASFIVNHLPVGLKG LLLAGVLSAAMSTLSSSINSLASSTVTDLLGGNASLKRSRLISLGWAAVLISIALVFDESDNAIVVLGLKIASFTYGGLL GLFLLSVSGKEFHVFSLSMGLIAGMGTVFVLDYLTFAWTWYIAASVLANLLVVWITETVLNNSFIRRS
Sequences:
>Translated_468_residues MQTLDLIIIIGFLAAMAGYGIWQGHTNRTTGDYFLGGRNLPWIVAMFSIVATETSVLTFVSIPGIAFRGDWTFLQLAMGY IIGRMLVSAVLLPIYFRQGVSSIYEVIGNRFGPHMQKLASTVFLVTRILADGVRFLATAVVVEAVTGWSLSASVLIIGIV TLVYTLSGGIRTIVWIDSIQFVLYFVGGIITIAFIAANLDVGLPEALGALANEGKLKVINHDWRLFSEPWAFFSALTGGI LLSFASHGVDYMMVQRVLGCKNLSAARKAMIGSGFFVFIQFTVFLLAGSLIYLFIGDVQIEKDREFASFIVNHLPVGLKG LLLAGVLSAAMSTLSSSINSLASSTVTDLLGGNASLKRSRLISLGWAAVLISIALVFDESDNAIVVLGLKIASFTYGGLL GLFLLSVSGKEFHVFSLSMGLIAGMGTVFVLDYLTFAWTWYIAASVLANLLVVWITETVLNNSFIRRS >Mature_468_residues MQTLDLIIIIGFLAAMAGYGIWQGHTNRTTGDYFLGGRNLPWIVAMFSIVATETSVLTFVSIPGIAFRGDWTFLQLAMGY IIGRMLVSAVLLPIYFRQGVSSIYEVIGNRFGPHMQKLASTVFLVTRILADGVRFLATAVVVEAVTGWSLSASVLIIGIV TLVYTLSGGIRTIVWIDSIQFVLYFVGGIITIAFIAANLDVGLPEALGALANEGKLKVINHDWRLFSEPWAFFSALTGGI LLSFASHGVDYMMVQRVLGCKNLSAARKAMIGSGFFVFIQFTVFLLAGSLIYLFIGDVQIEKDREFASFIVNHLPVGLKG LLLAGVLSAAMSTLSSSINSLASSTVTDLLGGNASLKRSRLISLGWAAVLISIALVFDESDNAIVVLGLKIASFTYGGLL GLFLLSVSGKEFHVFSLSMGLIAGMGTVFVLDYLTFAWTWYIAASVLANLLVVWITETVLNNSFIRRS
Specific function: Actively transports glucose into cells by Na(+) cotransport [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI4507035, Length=416, Percent_Identity=27.4038461538462, Blast_Score=135, Evalue=9e-32, Organism=Homo sapiens, GI157671931, Length=422, Percent_Identity=26.303317535545, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI256985183, Length=431, Percent_Identity=26.2180974477958, Blast_Score=124, Evalue=3e-28, Organism=Homo sapiens, GI167466278, Length=361, Percent_Identity=26.8698060941828, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI110835708, Length=469, Percent_Identity=23.6673773987207, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI4507033, Length=400, Percent_Identity=24.25, Blast_Score=83, Evalue=7e-16, Organism=Homo sapiens, GI206597483, Length=374, Percent_Identity=25.9358288770053, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI4507031, Length=454, Percent_Identity=24.0088105726872, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI14140236, Length=391, Percent_Identity=25.0639386189258, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI109659836, Length=488, Percent_Identity=22.7459016393443, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI206597487, Length=393, Percent_Identity=23.9185750636132, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI109659839, Length=504, Percent_Identity=21.2301587301587, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI17941285, Length=391, Percent_Identity=22.5063938618926, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI1790113, Length=365, Percent_Identity=23.8356164383562, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI87082237, Length=376, Percent_Identity=24.468085106383, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI115533094, Length=348, Percent_Identity=28.448275862069, Blast_Score=93, Evalue=4e-19, Organism=Caenorhabditis elegans, GI32566512, Length=280, Percent_Identity=27.1428571428571, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI115533096, Length=215, Percent_Identity=30.6976744186047, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI28573698, Length=417, Percent_Identity=25.8992805755396, Blast_Score=115, Evalue=5e-26, Organism=Drosophila melanogaster, GI24651741, Length=433, Percent_Identity=24.2494226327945, Blast_Score=109, Evalue=4e-24, Organism=Drosophila melanogaster, GI24641117, Length=404, Percent_Identity=26.7326732673267, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI24651739, Length=438, Percent_Identity=25.3424657534247, Blast_Score=106, Evalue=4e-23, Organism=Drosophila melanogaster, GI24640370, Length=394, Percent_Identity=25.8883248730964, Blast_Score=102, Evalue=4e-22, Organism=Drosophila melanogaster, GI221459584, Length=405, Percent_Identity=28.3950617283951, Blast_Score=102, Evalue=5e-22, Organism=Drosophila melanogaster, GI24645928, Length=363, Percent_Identity=26.4462809917355, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI281362918, Length=288, Percent_Identity=23.2638888888889, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI24650192, Length=412, Percent_Identity=26.2135922330097, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI28574994, Length=435, Percent_Identity=23.448275862069, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI221459588, Length=409, Percent_Identity=26.4058679706601, Blast_Score=89, Evalue=7e-18, Organism=Drosophila melanogaster, GI281364280, Length=370, Percent_Identity=24.5945945945946, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI19920916, Length=404, Percent_Identity=25.990099009901, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI161076631, Length=389, Percent_Identity=24.1645244215938, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI221459586, Length=411, Percent_Identity=25.7907542579075, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI281362054, Length=348, Percent_Identity=24.7126436781609, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI281362052, Length=348, Percent_Identity=24.7126436781609, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI281362050, Length=348, Percent_Identity=24.7126436781609, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI24648056, Length=348, Percent_Identity=24.7126436781609, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI21356827, Length=348, Percent_Identity=24.7126436781609, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI221379702, Length=408, Percent_Identity=22.5490196078431, Blast_Score=72, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 50557; Mature: 50557
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTLDLIIIIGFLAAMAGYGIWQGHTNRTTGDYFLGGRNLPWIVAMFSIVATETSVLTFV CCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHEEEE SIPGIAFRGDWTFLQLAMGYIIGRMLVSAVLLPIYFRQGVSSIYEVIGNRFGPHMQKLAS ECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH TVFLVTRILADGVRFLATAVVVEAVTGWSLSASVLIIGIVTLVYTLSGGIRTIVWIDSIQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHH FVLYFVGGIITIAFIAANLDVGLPEALGALANEGKLKVINHDWRLFSEPWAFFSALTGGI HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHH LLSFASHGVDYMMVQRVLGCKNLSAARKAMIGSGFFVFIQFTVFLLAGSLIYLFIGDVQI HHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEE EKDREFASFIVNHLPVGLKGLLLAGVLSAAMSTLSSSINSLASSTVTDLLGGNASLKRSR ECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LISLGWAAVLISIALVFDESDNAIVVLGLKIASFTYGGLLGLFLLSVSGKEFHVFSLSMG HHHHHHHHHHHHHHHEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHH LIAGMGTVFVLDYLTFAWTWYIAASVLANLLVVWITETVLNNSFIRRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure MQTLDLIIIIGFLAAMAGYGIWQGHTNRTTGDYFLGGRNLPWIVAMFSIVATETSVLTFV CCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHEEEE SIPGIAFRGDWTFLQLAMGYIIGRMLVSAVLLPIYFRQGVSSIYEVIGNRFGPHMQKLAS ECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH TVFLVTRILADGVRFLATAVVVEAVTGWSLSASVLIIGIVTLVYTLSGGIRTIVWIDSIQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHH FVLYFVGGIITIAFIAANLDVGLPEALGALANEGKLKVINHDWRLFSEPWAFFSALTGGI HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHH LLSFASHGVDYMMVQRVLGCKNLSAARKAMIGSGFFVFIQFTVFLLAGSLIYLFIGDVQI HHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEE EKDREFASFIVNHLPVGLKGLLLAGVLSAAMSTLSSSINSLASSTVTDLLGGNASLKRSR ECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LISLGWAAVLISIALVFDESDNAIVVLGLKIASFTYGGLLGLFLLSVSGKEFHVFSLSMG HHHHHHHHHHHHHHHEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHH LIAGMGTVFVLDYLTFAWTWYIAASVLANLLVVWITETVLNNSFIRRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8652595; 10835424; 10757971 [H]