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The map label for this gene is 189499213

Identifier: 189499213

GI number: 189499213

Start: 221828

End: 223999

Strand: Reverse

Name: 189499213

Synonym: Cphamn1_0233

Alternate gene names: NA

Gene position: 223999-221828 (Counterclockwise)

Preceding gene: 189499214

Following gene: 189499209

Centisome position: 8.19

GC content: 44.57

Gene sequence:

>2172_bases
ATGCAGATTTGCCTGATAAATGCCCTAACCATCAGTGATTTGGGCTCATCTGAACCATCAAGGGATTCAGAACAAGTGGA
AATCTCTGCCCCCCTTGGAATTCTTGGCCTGGCATCGATGGTTCAACGCGAATGCAAAAATATTGACACCACCATTATCA
ACCTGAACAAACTGTATTTAGAATACCTCAAAGAACAAAAATCAAGTTCTAAAGCCACGTTTGTAGACACTATTATCGAT
CATATCGAAACCTGTGCCCCCTCACCGGACGTCATGGGTTTCAGCACCATTTGCAGCTCATACCCGTTGACGCTCAGACT
GGCAACGCTCTACAAAAAGAGACATAGCAACACCACGGTCATACTTGGTGGGCCACAAGCTTCGGCGACCGATCTTGCAT
CAATAAAAGCATTTCCTGAAATCGATATGATTTTCAGAGGAGAAGCCGAATATGGCTTTGTTTCTTTCCTGGAATCAATG
CAAGAAAACAAACCGGGGCATCTCTACAACATTAAAGGTCTGACTTTCAGAAACAGCAACAACATCATTCGTAATGCCAA
TGCTGATCCCGTCATGGACCTTGATAGCCTCCCGGTTCCTGCATATGATCTCGACCCCTACATTAATAACTACAAAACGC
TGTCACTTGAAATCGGCCGAGGATGCCCCTACAGTTGCTCCTTCTGTTCGACCAGTACTTTTTTCGGGAGAAAATTCAGG
CTTAAATCCCCCGGTACGATCCTCGATCAAATGCGGTTCATTAAAAGAAAATTTGGAATCGACAATATAGGACTCGACCA
TGATATGTTCTCCGCTGACAGAAAAAAGGTACGTGCTTTTTGTGAAACACTTATCGCCTCCGGAGAGAAATTTTATTGGG
GCTGCAGTGCCCGTGTGGACTGTGTGGATAATGATTTACTTGCTTTGATGGCACAAGCCGGATGCAACGGGATTTTTTTC
GGCATAGAAAGTGCTTCAAAGAGAATGCAAAAATCCATCAACAAGAATCTTGATTTAGCCAATGCTGTCGACACAATTGC
GCATGCCGACAAAATGGGCATAAAAAGTGGGGTCTCACTCATAACCGCTTTCCCTGATGAAACCGATGAAGAATTAAACA
ACACCTTAAACTTCTTTATCGGCTCGCTCCGATTCGACAATGCCGCTCCACAGATCGGCATTCTTGCCCCTCTTGCCGGC
TCACCGCTGTACAACAAACACAAAGATGAACTGGTCCTCGATCATATCTTTTCTGAGATGTCCTTCCAGGGATGGACATT
CGATGATCAGGACCTAACCCTGATAGAACAACATCCTGAAGTCTTTCCCGACTTTTATTCGATTCCAAACCCGGAGATCC
CACGCAGGGAATTCAAACAAATCCGCGATTTCGTCACAGCACTACAGGTATGGTTTCGCTGGCTCCCGGTAGCAATGCAG
CAGGAATCCGCCAACATGCTGAAAATCAGCCGTCACTGGATCCAATGGTGTGTGGAGAACAATATTCCGGAAAAAATAGA
CGATGAAATACCCTACTATTGCCATAGACGGTTTGCCGATGACTTCCTGAGATTCATCAACGACGTCTATATACCCCGGC
TATCTTCACATCAGGAAATCATTGCAGAACTCACCAAAACCGAAGGATTTTTCCACCCGTACAAAGACCACCCTGAAGAT
GCAAAAGAAGAAACAGTTTCAGGCAGTGAATCAGATACCATGAACGACGATAAAGGCGGTACTACAATCGCATCGTCCAG
TCATCTCTTTTCTCTTGCCTCATATCCATATATCCCTGACAATGTACTTGTTACCGATTTGAACATAGACTACAAGAAAC
TCCTCGAATGCCTTCGCAAAAAAGAGGACCTTAAGCGTGTCAAACAAAACAAAGTCACCATTGCCTTCAGGGAGATTGAA
CATGGAGATATAAAAATTCAAGTCAGGCAACTCAGTACCCTTTCAAAAGAAATCCTCCATTTATGCAACGGATTGCTGTC
AATCAGCGAAATCATCTCCCTGTTCTCACAAAAGCACACGCAAATCAATGGCGTTCCGGTTCAGAAGGCCGCTACATTCA
TGCTCATTGAGCTTTTTAAACAAGGGTTGATAACGCTTTGCGATGAAAAGCAGGAAGGAAAAGATGAGTTGCCGCTGAAA
TCATCGGCCTAA

Upstream 100 bases:

>100_bases
GTAGAGACCTCGCTATCGGATTACGCACTATGCATCAGCATAACAAAAAAGTATGAATCTCGTGTAATATTGCACTCCCA
TCATCATAACAGAACCAACA

Downstream 100 bases:

>100_bases
TACAACGACAGAGAAAGCAAAGCCGCTCAATAGAGGCAGTCCACCGGGTGATGTCGGGCATGCAAAGTCGCCTTCAGAAT
CAATGCCGGTCAGGACAGCT

Product: Radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 723; Mature: 723

Protein sequence:

>723_residues
MQICLINALTISDLGSSEPSRDSEQVEISAPLGILGLASMVQRECKNIDTTIINLNKLYLEYLKEQKSSSKATFVDTIID
HIETCAPSPDVMGFSTICSSYPLTLRLATLYKKRHSNTTVILGGPQASATDLASIKAFPEIDMIFRGEAEYGFVSFLESM
QENKPGHLYNIKGLTFRNSNNIIRNANADPVMDLDSLPVPAYDLDPYINNYKTLSLEIGRGCPYSCSFCSTSTFFGRKFR
LKSPGTILDQMRFIKRKFGIDNIGLDHDMFSADRKKVRAFCETLIASGEKFYWGCSARVDCVDNDLLALMAQAGCNGIFF
GIESASKRMQKSINKNLDLANAVDTIAHADKMGIKSGVSLITAFPDETDEELNNTLNFFIGSLRFDNAAPQIGILAPLAG
SPLYNKHKDELVLDHIFSEMSFQGWTFDDQDLTLIEQHPEVFPDFYSIPNPEIPRREFKQIRDFVTALQVWFRWLPVAMQ
QESANMLKISRHWIQWCVENNIPEKIDDEIPYYCHRRFADDFLRFINDVYIPRLSSHQEIIAELTKTEGFFHPYKDHPED
AKEETVSGSESDTMNDDKGGTTIASSSHLFSLASYPYIPDNVLVTDLNIDYKKLLECLRKKEDLKRVKQNKVTIAFREIE
HGDIKIQVRQLSTLSKEILHLCNGLLSISEIISLFSQKHTQINGVPVQKAATFMLIELFKQGLITLCDEKQEGKDELPLK
SSA

Sequences:

>Translated_723_residues
MQICLINALTISDLGSSEPSRDSEQVEISAPLGILGLASMVQRECKNIDTTIINLNKLYLEYLKEQKSSSKATFVDTIID
HIETCAPSPDVMGFSTICSSYPLTLRLATLYKKRHSNTTVILGGPQASATDLASIKAFPEIDMIFRGEAEYGFVSFLESM
QENKPGHLYNIKGLTFRNSNNIIRNANADPVMDLDSLPVPAYDLDPYINNYKTLSLEIGRGCPYSCSFCSTSTFFGRKFR
LKSPGTILDQMRFIKRKFGIDNIGLDHDMFSADRKKVRAFCETLIASGEKFYWGCSARVDCVDNDLLALMAQAGCNGIFF
GIESASKRMQKSINKNLDLANAVDTIAHADKMGIKSGVSLITAFPDETDEELNNTLNFFIGSLRFDNAAPQIGILAPLAG
SPLYNKHKDELVLDHIFSEMSFQGWTFDDQDLTLIEQHPEVFPDFYSIPNPEIPRREFKQIRDFVTALQVWFRWLPVAMQ
QESANMLKISRHWIQWCVENNIPEKIDDEIPYYCHRRFADDFLRFINDVYIPRLSSHQEIIAELTKTEGFFHPYKDHPED
AKEETVSGSESDTMNDDKGGTTIASSSHLFSLASYPYIPDNVLVTDLNIDYKKLLECLRKKEDLKRVKQNKVTIAFREIE
HGDIKIQVRQLSTLSKEILHLCNGLLSISEIISLFSQKHTQINGVPVQKAATFMLIELFKQGLITLCDEKQEGKDELPLK
SSA
>Mature_723_residues
MQICLINALTISDLGSSEPSRDSEQVEISAPLGILGLASMVQRECKNIDTTIINLNKLYLEYLKEQKSSSKATFVDTIID
HIETCAPSPDVMGFSTICSSYPLTLRLATLYKKRHSNTTVILGGPQASATDLASIKAFPEIDMIFRGEAEYGFVSFLESM
QENKPGHLYNIKGLTFRNSNNIIRNANADPVMDLDSLPVPAYDLDPYINNYKTLSLEIGRGCPYSCSFCSTSTFFGRKFR
LKSPGTILDQMRFIKRKFGIDNIGLDHDMFSADRKKVRAFCETLIASGEKFYWGCSARVDCVDNDLLALMAQAGCNGIFF
GIESASKRMQKSINKNLDLANAVDTIAHADKMGIKSGVSLITAFPDETDEELNNTLNFFIGSLRFDNAAPQIGILAPLAG
SPLYNKHKDELVLDHIFSEMSFQGWTFDDQDLTLIEQHPEVFPDFYSIPNPEIPRREFKQIRDFVTALQVWFRWLPVAMQ
QESANMLKISRHWIQWCVENNIPEKIDDEIPYYCHRRFADDFLRFINDVYIPRLSSHQEIIAELTKTEGFFHPYKDHPED
AKEETVSGSESDTMNDDKGGTTIASSSHLFSLASYPYIPDNVLVTDLNIDYKKLLECLRKKEDLKRVKQNKVTIAFREIE
HGDIKIQVRQLSTLSKEILHLCNGLLSISEIISLFSQKHTQINGVPVQKAATFMLIELFKQGLITLCDEKQEGKDELPLK
SSA

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 81673; Mature: 81673

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQICLINALTISDLGSSEPSRDSEQVEISAPLGILGLASMVQRECKNIDTTIINLNKLYL
CEEEEEEEEEHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEHHHHHHH
EYLKEQKSSSKATFVDTIIDHIETCAPSPDVMGFSTICSSYPLTLRLATLYKKRHSNTTV
HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCEE
ILGGPQASATDLASIKAFPEIDMIFRGEAEYGFVSFLESMQENKPGHLYNIKGLTFRNSN
EEECCCCCHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEECEEEEECCC
NIIRNANADPVMDLDSLPVPAYDLDPYINNYKTLSLEIGRGCPYSCSFCSTSTFFGRKFR
CEEECCCCCCCCCCCCCCCCCCCCCHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEE
LKSPGTILDQMRFIKRKFGIDNIGLDHDMFSADRKKVRAFCETLIASGEKFYWGCSARVD
ECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEE
CVDNDLLALMAQAGCNGIFFGIESASKRMQKSINKNLDLANAVDTIAHADKMGIKSGVSL
CCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCE
ITAFPDETDEELNNTLNFFIGSLRFDNAAPQIGILAPLAGSPLYNKHKDELVLDHIFSEM
EEECCCCCHHHHHHHHHHHHHHEEECCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHH
SFQGWTFDDQDLTLIEQHPEVFPDFYSIPNPEIPRREFKQIRDFVTALQVWFRWLPVAMQ
CCCCCCCCCCCCHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QESANMLKISRHWIQWCVENNIPEKIDDEIPYYCHRRFADDFLRFINDVYIPRLSSHQEI
HCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
IAELTKTEGFFHPYKDHPEDAKEETVSGSESDTMNDDKGGTTIASSSHLFSLASYPYIPD
HHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEECCCHHHHHHCCCCCCC
NVLVTDLNIDYKKLLECLRKKEDLKRVKQNKVTIAFREIEHGDIKIQVRQLSTLSKEILH
CEEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEEEHHHHHHHHHHHH
LCNGLLSISEIISLFSQKHTQINGVPVQKAATFMLIELFKQGLITLCDEKQEGKDELPLK
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCC
SSA
CCC
>Mature Secondary Structure
MQICLINALTISDLGSSEPSRDSEQVEISAPLGILGLASMVQRECKNIDTTIINLNKLYL
CEEEEEEEEEHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEHHHHHHH
EYLKEQKSSSKATFVDTIIDHIETCAPSPDVMGFSTICSSYPLTLRLATLYKKRHSNTTV
HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCEE
ILGGPQASATDLASIKAFPEIDMIFRGEAEYGFVSFLESMQENKPGHLYNIKGLTFRNSN
EEECCCCCHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEECEEEEECCC
NIIRNANADPVMDLDSLPVPAYDLDPYINNYKTLSLEIGRGCPYSCSFCSTSTFFGRKFR
CEEECCCCCCCCCCCCCCCCCCCCCHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEE
LKSPGTILDQMRFIKRKFGIDNIGLDHDMFSADRKKVRAFCETLIASGEKFYWGCSARVD
ECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEE
CVDNDLLALMAQAGCNGIFFGIESASKRMQKSINKNLDLANAVDTIAHADKMGIKSGVSL
CCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCE
ITAFPDETDEELNNTLNFFIGSLRFDNAAPQIGILAPLAGSPLYNKHKDELVLDHIFSEM
EEECCCCCHHHHHHHHHHHHHHEEECCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHH
SFQGWTFDDQDLTLIEQHPEVFPDFYSIPNPEIPRREFKQIRDFVTALQVWFRWLPVAMQ
CCCCCCCCCCCCHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QESANMLKISRHWIQWCVENNIPEKIDDEIPYYCHRRFADDFLRFINDVYIPRLSSHQEI
HCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
IAELTKTEGFFHPYKDHPEDAKEETVSGSESDTMNDDKGGTTIASSSHLFSLASYPYIPD
HHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEECCCHHHHHHCCCCCCC
NVLVTDLNIDYKKLLECLRKKEDLKRVKQNKVTIAFREIEHGDIKIQVRQLSTLSKEILH
CEEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEEEHHHHHHHHHHHH
LCNGLLSISEIISLFSQKHTQINGVPVQKAATFMLIELFKQGLITLCDEKQEGKDELPLK
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCC
SSA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]