| Definition | Chlorobium phaeobacteroides BS1 chromosome, complete genome. |
|---|---|
| Accession | NC_010831 |
| Length | 2,736,403 |
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The map label for this gene is 189499153
Identifier: 189499153
GI number: 189499153
Start: 162619
End: 163011
Strand: Direct
Name: 189499153
Synonym: Cphamn1_0167
Alternate gene names: NA
Gene position: 162619-163011 (Clockwise)
Preceding gene: 189499152
Following gene: 189499175
Centisome position: 5.94
GC content: 45.55
Gene sequence:
>393_bases ATGAGGCAAGCTCTTTTTCAGGAAAAGTATCCAATCTATACGCTGGAAATCGACAAGACAGAAACGTCATTAACATCGGT CGATGAGATTATCTTCGCTTTACACAACAGAATTGATGAACATCCGCTTGTCGCATATATCGGGATATTCGATCACTATG CACATACCAGGTCACTGAAAGAAGGGGTTGTGAGCGACCGGATACTTGCCGCTAAAAATATTCTTTTCTGTTTTGGAAAG GAACTTCCCAACCCGTTGGTTCTCTCGGTCAGGCCCCGTTCTATAGGTGTCGCTGAGTTGGAAAACTCCTTTGTGATTAC CTTTCTCGAGGCTCCGAATCCCGTGGCAAATGATGCTATGGAGAGTTGGGCGTTGAGTTTGAGGGACAGGTAG
Upstream 100 bases:
>100_bases TTATTAGATAGTTTGCTGAAAATACCCTTTATCGTAGCACTTTATCCCGGCAGTGCAAAACTGCTGTACGTATTACATAA TTTACATCAGGGATGAGATC
Downstream 100 bases:
>100_bases CTACCGTCCGGTAGGCATCCCACCCTTGTACTGTTTTTTCCGGAAACAGAAAGGGTGGTGGGAGCTGGAAAAACGGTAGT CTGACTGTTTACCTGGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MRQALFQEKYPIYTLEIDKTETSLTSVDEIIFALHNRIDEHPLVAYIGIFDHYAHTRSLKEGVVSDRILAAKNILFCFGK ELPNPLVLSVRPRSIGVAELENSFVITFLEAPNPVANDAMESWALSLRDR
Sequences:
>Translated_130_residues MRQALFQEKYPIYTLEIDKTETSLTSVDEIIFALHNRIDEHPLVAYIGIFDHYAHTRSLKEGVVSDRILAAKNILFCFGK ELPNPLVLSVRPRSIGVAELENSFVITFLEAPNPVANDAMESWALSLRDR >Mature_130_residues MRQALFQEKYPIYTLEIDKTETSLTSVDEIIFALHNRIDEHPLVAYIGIFDHYAHTRSLKEGVVSDRILAAKNILFCFGK ELPNPLVLSVRPRSIGVAELENSFVITFLEAPNPVANDAMESWALSLRDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14773; Mature: 14773
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQALFQEKYPIYTLEIDKTETSLTSVDEIIFALHNRIDEHPLVAYIGIFDHYAHTRSLK CCCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHH EGVVSDRILAAKNILFCFGKELPNPLVLSVRPRSIGVAELENSFVITFLEAPNPVANDAM HHHHHHHHHHHHHHHEEECCCCCCCEEEEECCCCCCCEECCCCEEEEEECCCCCHHHHHH ESWALSLRDR HHHHHHCCCC >Mature Secondary Structure MRQALFQEKYPIYTLEIDKTETSLTSVDEIIFALHNRIDEHPLVAYIGIFDHYAHTRSLK CCCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHH EGVVSDRILAAKNILFCFGKELPNPLVLSVRPRSIGVAELENSFVITFLEAPNPVANDAM HHHHHHHHHHHHHHHEEECCCCCCCEEEEECCCCCCCEECCCCEEEEEECCCCCHHHHHH ESWALSLRDR HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA