Definition | Chlorobium phaeobacteroides BS1 chromosome, complete genome. |
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Accession | NC_010831 |
Length | 2,736,403 |
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The map label for this gene is 189499132
Identifier: 189499132
GI number: 189499132
Start: 136014
End: 136337
Strand: Reverse
Name: 189499132
Synonym: Cphamn1_0142
Alternate gene names: NA
Gene position: 136337-136014 (Counterclockwise)
Preceding gene: 189499133
Following gene: 189499129
Centisome position: 4.98
GC content: 50.62
Gene sequence:
>324_bases ATGACTGCTGAAAACCCGAAAATCCGATTCAAGCAGCGCGTCCGCGAGTGGGCTGAAAAGCTAGATGTCCGGGTAGTATG GCTCGGTGTCCGGCCTATGAAAAACAAATGGGCCTCCTGCTCCACCGAGGGTCGTCTGAATTTCAATGTCGAGTTGCTGG ATATGGACGAACGAGTCTGGGACTACGTTATCGTCCATGAATTGCTGCACTTCTTCGTACCCAACCACGGAATACTCTGT AAAAGCCTCATGCGAGCTCATCTGGGTGAGTATGAACCGTATGAAGCCGAGTTAAAGAAAACGGTACGGAAACGCTCACG CTAA
Upstream 100 bases:
>100_bases GTAGGGATAATATTTTCTATGCCGTCCCCGACCGCCATCCTTTTCTAAGGTCGCAAATTGCGACCTTAGAGAATCTGCCT GAGCAAACCGAATTTGAATC
Downstream 100 bases:
>100_bases AGCTGTCAACTGAGGGCAGAAAGGAGAAACATCTCGCGTATTTCATGCTTATCCGCGATGAGATCAGGAAACAGGGCATT CCGACTGGTTTTACGGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MTAENPKIRFKQRVREWAEKLDVRVVWLGVRPMKNKWASCSTEGRLNFNVELLDMDERVWDYVIVHELLHFFVPNHGILC KSLMRAHLGEYEPYEAELKKTVRKRSR
Sequences:
>Translated_107_residues MTAENPKIRFKQRVREWAEKLDVRVVWLGVRPMKNKWASCSTEGRLNFNVELLDMDERVWDYVIVHELLHFFVPNHGILC KSLMRAHLGEYEPYEAELKKTVRKRSR >Mature_106_residues TAENPKIRFKQRVREWAEKLDVRVVWLGVRPMKNKWASCSTEGRLNFNVELLDMDERVWDYVIVHELLHFFVPNHGILCK SLMRAHLGEYEPYEAELKKTVRKRSR
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12870; Mature: 12739
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAENPKIRFKQRVREWAEKLDVRVVWLGVRPMKNKWASCSTEGRLNFNVELLDMDERVW CCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECHHHHH DYVIVHELLHFFVPNHGILCKSLMRAHLGEYEPYEAELKKTVRKRSR HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure TAENPKIRFKQRVREWAEKLDVRVVWLGVRPMKNKWASCSTEGRLNFNVELLDMDERVW CCCCCCHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECHHHHH DYVIVHELLHFFVPNHGILCKSLMRAHLGEYEPYEAELKKTVRKRSR HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA