| Definition | Chlorobium phaeobacteroides BS1 chromosome, complete genome. |
|---|---|
| Accession | NC_010831 |
| Length | 2,736,403 |
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The map label for this gene is 189499128
Identifier: 189499128
GI number: 189499128
Start: 133822
End: 134046
Strand: Direct
Name: 189499128
Synonym: Cphamn1_0138
Alternate gene names: NA
Gene position: 133822-134046 (Clockwise)
Preceding gene: 189499127
Following gene: 189499130
Centisome position: 4.89
GC content: 34.22
Gene sequence:
>225_bases ATGAAAAACGCCGTAAAAACACAAATCTGGATAGTAATCTCGGTATACGTATTGATTGCTTTGGCGAAAAAGAAACTCAA CTTGGATATAACTCTCTACACTTTTCTACAGATTTTGAGTGTCAGTGTGTTTGAGCAACTTAATATTTTACAATTAGTTA CGAATTCTGCCGGCACAAATCATGGCACCTTCACCTGTAAACAACTGAATTTATTTGACTTATAA
Upstream 100 bases:
>100_bases AGGAGTGCAAGCGGCAGTCTCAACAGGTTGAACACGATCCTCAGGAAAAGGAACTTCTTGAGTTTCTTGATGAGGCTTCG GACCATGAGGGTTGGGAATA
Downstream 100 bases:
>100_bases CCGAACACTACTGGTCAAATATGCTTGGTTTTCTGTGGTGCTGTATGTTATCTAGCATTTTCAGTGCTCTTTTTTCCCTT GCCACTTGGTCATTTTTAAT
Product: transposase, IS4 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 74; Mature: 74
Protein sequence:
>74_residues MKNAVKTQIWIVISVYVLIALAKKKLNLDITLYTFLQILSVSVFEQLNILQLVTNSAGTNHGTFTCKQLNLFDL
Sequences:
>Translated_74_residues MKNAVKTQIWIVISVYVLIALAKKKLNLDITLYTFLQILSVSVFEQLNILQLVTNSAGTNHGTFTCKQLNLFDL >Mature_74_residues MKNAVKTQIWIVISVYVLIALAKKKLNLDITLYTFLQILSVSVFEQLNILQLVTNSAGTNHGTFTCKQLNLFDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8356; Mature: 8356
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNAVKTQIWIVISVYVLIALAKKKLNLDITLYTFLQILSVSVFEQLNILQLVTNSAGTN CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC HGTFTCKQLNLFDL CCEEEEEEEEECCC >Mature Secondary Structure MKNAVKTQIWIVISVYVLIALAKKKLNLDITLYTFLQILSVSVFEQLNILQLVTNSAGTN CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC HGTFTCKQLNLFDL CCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA