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The map label for this gene is 189499087

Identifier: 189499087

GI number: 189499087

Start: 86755

End: 87069

Strand: Reverse

Name: 189499087

Synonym: Cphamn1_0093

Alternate gene names: NA

Gene position: 87069-86755 (Counterclockwise)

Preceding gene: 189499088

Following gene: 189499086

Centisome position: 3.18

GC content: 48.89

Gene sequence:

>315_bases
ATGTTGCCGTATGCTTCCTTTCAGGTGAATGGCACGCACATTGGGAACCACAAAAGAATCGTCGCATGCTACTGCAACCT
CAATGAATCATCACCGCTTCAGGGAAAAACGTTCCGGGAAGCAGACCGCTACAACAACTGTCAGGTTAACGTTGTCAGCT
ATAAACTTCCGGCAGGAGAAAGACACTCGACCCCGAAACCATCCGAGGTTATGCAGAAAGACGGCACCCGTATCGCGATA
GGCCATTTGCCACCTATCCCCACCTTCCAGTCCAAGAAACTAATTGCGACTTGCTTTGTTTTATGTAGTAGGTGA

Upstream 100 bases:

>100_bases
GGTGAGATGTTCGCTGTGAGAAAATTCAGCATAACGCATTATATGGTATAAAGTTGACAGCATAAAGCATTTGTTGAAAC
GATCAACTTGGGTTTTAGCA

Downstream 100 bases:

>100_bases
AACAGCATGGTTTCACTATCTGCAACGTACGTTTTGCGATAATCAAACAGGGTGAATCATGACCAGAAAAAGTGATTTTA
TGGACAAGATTTTCGAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: TrkA-N Domain-Containing Protein

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MLPYASFQVNGTHIGNHKRIVACYCNLNESSPLQGKTFREADRYNNCQVNVVSYKLPAGERHSTPKPSEVMQKDGTRIAI
GHLPPIPTFQSKKLIATCFVLCSR

Sequences:

>Translated_104_residues
MLPYASFQVNGTHIGNHKRIVACYCNLNESSPLQGKTFREADRYNNCQVNVVSYKLPAGERHSTPKPSEVMQKDGTRIAI
GHLPPIPTFQSKKLIATCFVLCSR
>Mature_104_residues
MLPYASFQVNGTHIGNHKRIVACYCNLNESSPLQGKTFREADRYNNCQVNVVSYKLPAGERHSTPKPSEVMQKDGTRIAI
GHLPPIPTFQSKKLIATCFVLCSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11621; Mature: 11621

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPYASFQVNGTHIGNHKRIVACYCNLNESSPLQGKTFREADRYNNCQVNVVSYKLPAGE
CCCCCCEEECCEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC
RHSTPKPSEVMQKDGTRIAIGHLPPIPTFQSKKLIATCFVLCSR
CCCCCCHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MLPYASFQVNGTHIGNHKRIVACYCNLNESSPLQGKTFREADRYNNCQVNVVSYKLPAGE
CCCCCCEEECCEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC
RHSTPKPSEVMQKDGTRIAIGHLPPIPTFQSKKLIATCFVLCSR
CCCCCCHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA