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The map label for this gene is trkA [H]

Identifier: 189499082

GI number: 189499082

Start: 82189

End: 83577

Strand: Reverse

Name: trkA [H]

Synonym: Cphamn1_0088

Alternate gene names: 189499082

Gene position: 83577-82189 (Counterclockwise)

Preceding gene: 189499083

Following gene: 189499081

Centisome position: 3.05

GC content: 50.47

Gene sequence:

>1389_bases
ATGAGTGTTACAAATATACTGGTAATCGGTTTGGGAGGAGTAGGGCTCCATGTTGCGCAGCGCCTTGTTCATGATGGATA
CGGTGTTACGGTAATCGAATCGAGCCCCCAGCTGATCAACAGCGTTAACGACAAGATCGACGCGAAAATCATTGAGGGAA
ACGCCATGGAGCTTGCCTGCTGGAAGCGGGCAAAAGCAGAAACCATGGATCTCATGATAGCCGTTACCAATGAGGACTCG
GTCAATATGATAGCCTCCATCATCGCTGACCGGTTCGGCATTCCGCGTAAAATTGCCCGTGTCCGTTCCCCCGAATACGG
TTATGAAAACTCGTTTCTCAACAAAAGCGATTTCAAAATCGATCTGGTCATACACCCCGAAGAACTGGTTGCGCAGGAAA
TGGCACGCCTTGTCATGCGGGCCTCGGCAAACGACGTCGTCGACATCGGTGAAGGCGAGATGAAGGTTGTCGCCATGCGC
GTCAGCCAGGACAGTCCGGTGGTCAACAAGACACTGAAAGAGATTGCCCTTCTGCACAATGATTTTCAGTTCAAGATCGT
TGCCGTTGCACGAGGCATCGCCACCATTATTCCGGGCGACGATGACACAATTCTTACAAACGACCAGATCTTCATCATGC
TGAACGGCAAGAACCTGTCGCGGCTGATGAATCTCATGAACGTTCGCGAACAGAGCATTCACAAGGTCATGATCGTCGGC
GGCGGTATGGTTGGTGCCCGGGTGGCCAAGCTGCTCGGCAAAACCGTAAAAATAACACTCATAGAAAATGACAAGGAGCA
TGCAGAAGAGCTTGCCTCTTCGCTGAACAACACCGATGTTCTGCTTGGTGACGGAACCGACGTCAATGTCATGGTGCTTG
GCGGGCTGATGGAAATGGACAGCTTCATTGCAACAACAGGCAACAATGAAACAAACATCATCAGCTGCCTGCTGGCCAAA
CACATCATGAACAGAACCAATGTAGACGCCAATGCCACAGTTGGAAAAACCATCGCGCTGGTAAAAAAAGAGGACTATCT
GGTTCTGGCGTCAACTATCGGTCTCGACGTTGCTCTGAACAAAAAGATCTCTGCCGCCGATGAAATCATGAAGTTTATCA
GAATGGGGGAATTGTTCTCACTTGCCCATCTTCACGGTGTCGACGCAGAAGTCATTGAGCTTGCCGCATCACCAAGGTCC
CAGATCACAAAAAAGCCCCTGAAAAAAATGCGAACCATGCTGCAGGACAAACAGATTCTCATTGCCGGTGTCGTGCGTGA
CGGGCTATGCGAACTGACGGATGAACACACGGTTATCGAACCGAACGACCTTGCTGTCGTGGTTTCAGCGACCAAGAGCC
TCAAGGACGCACGCGAGCTTTTCAATTAA

Upstream 100 bases:

>100_bases
GGATCCCGGAGACAAACAGTTAAACTTATTCGCGGGTTATTTTTTTTGTAGATTATTTTCCTGTCATTTTTCTGGTTATT
GTTTATCCGAACAAAAAAGA

Downstream 100 bases:

>100_bases
TACCATCACAATGAAACCCGTCTTCGCTCAATGAATTTTCCAGCGATATCTCACGTTCTGGGCGCTCTTCTCATGTTTAT
CGGCAGCACCATGCTCCTGC

Product: potassium transporter peripheral membrane component

Products: NA

Alternate protein names: K(+)-uptake protein trkA [H]

Number of amino acids: Translated: 462; Mature: 461

Protein sequence:

>462_residues
MSVTNILVIGLGGVGLHVAQRLVHDGYGVTVIESSPQLINSVNDKIDAKIIEGNAMELACWKRAKAETMDLMIAVTNEDS
VNMIASIIADRFGIPRKIARVRSPEYGYENSFLNKSDFKIDLVIHPEELVAQEMARLVMRASANDVVDIGEGEMKVVAMR
VSQDSPVVNKTLKEIALLHNDFQFKIVAVARGIATIIPGDDDTILTNDQIFIMLNGKNLSRLMNLMNVREQSIHKVMIVG
GGMVGARVAKLLGKTVKITLIENDKEHAEELASSLNNTDVLLGDGTDVNVMVLGGLMEMDSFIATTGNNETNIISCLLAK
HIMNRTNVDANATVGKTIALVKKEDYLVLASTIGLDVALNKKISAADEIMKFIRMGELFSLAHLHGVDAEVIELAASPRS
QITKKPLKKMRTMLQDKQILIAGVVRDGLCELTDEHTVIEPNDLAVVVSATKSLKDARELFN

Sequences:

>Translated_462_residues
MSVTNILVIGLGGVGLHVAQRLVHDGYGVTVIESSPQLINSVNDKIDAKIIEGNAMELACWKRAKAETMDLMIAVTNEDS
VNMIASIIADRFGIPRKIARVRSPEYGYENSFLNKSDFKIDLVIHPEELVAQEMARLVMRASANDVVDIGEGEMKVVAMR
VSQDSPVVNKTLKEIALLHNDFQFKIVAVARGIATIIPGDDDTILTNDQIFIMLNGKNLSRLMNLMNVREQSIHKVMIVG
GGMVGARVAKLLGKTVKITLIENDKEHAEELASSLNNTDVLLGDGTDVNVMVLGGLMEMDSFIATTGNNETNIISCLLAK
HIMNRTNVDANATVGKTIALVKKEDYLVLASTIGLDVALNKKISAADEIMKFIRMGELFSLAHLHGVDAEVIELAASPRS
QITKKPLKKMRTMLQDKQILIAGVVRDGLCELTDEHTVIEPNDLAVVVSATKSLKDARELFN
>Mature_461_residues
SVTNILVIGLGGVGLHVAQRLVHDGYGVTVIESSPQLINSVNDKIDAKIIEGNAMELACWKRAKAETMDLMIAVTNEDSV
NMIASIIADRFGIPRKIARVRSPEYGYENSFLNKSDFKIDLVIHPEELVAQEMARLVMRASANDVVDIGEGEMKVVAMRV
SQDSPVVNKTLKEIALLHNDFQFKIVAVARGIATIIPGDDDTILTNDQIFIMLNGKNLSRLMNLMNVREQSIHKVMIVGG
GMVGARVAKLLGKTVKITLIENDKEHAEELASSLNNTDVLLGDGTDVNVMVLGGLMEMDSFIATTGNNETNIISCLLAKH
IMNRTNVDANATVGKTIALVKKEDYLVLASTIGLDVALNKKISAADEIMKFIRMGELFSLAHLHGVDAEVIELAASPRSQ
ITKKPLKKMRTMLQDKQILIAGVVRDGLCELTDEHTVIEPNDLAVVVSATKSLKDARELFN

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK N-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1789685, Length=460, Percent_Identity=26.304347826087, Blast_Score=182, Evalue=4e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 50404; Mature: 50272

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTNILVIGLGGVGLHVAQRLVHDGYGVTVIESSPQLINSVNDKIDAKIIEGNAMELAC
CCCCEEEEEEECCHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCCCCEEEECCCCEEEHH
WKRAKAETMDLMIAVTNEDSVNMIASIIADRFGIPRKIARVRSPEYGYENSFLNKSDFKI
HHHCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCEE
DLVIHPEELVAQEMARLVMRASANDVVDIGEGEMKVVAMRVSQDSPVVNKTLKEIALLHN
EEEECCHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHC
DFQFKIVAVARGIATIIPGDDDTILTNDQIFIMLNGKNLSRLMNLMNVREQSIHKVMIVG
CCEEEEEEEECCCEEEECCCCCEEEECCEEEEEECCCCHHHHHHHHHHHHHHHCEEEEEE
GGMVGARVAKLLGKTVKITLIENDKEHAEELASSLNNTDVLLGDGTDVNVMVLGGLMEMD
CCHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHCCCCEEEEECCCCEEEEEECCHHHHH
SFIATTGNNETNIISCLLAKHIMNRTNVDANATVGKTIALVKKEDYLVLASTIGLDVALN
HHEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEEECCEEEEEC
KKISAADEIMKFIRMGELFSLAHLHGVDAEVIELAASPRSQITKKPLKKMRTMLQDKQIL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEE
IAGVVRDGLCELTDEHTVIEPNDLAVVVSATKSLKDARELFN
EEEHHHCCHHHCCCCCEEECCCCCEEEEECHHHHHHHHHHCC
>Mature Secondary Structure 
SVTNILVIGLGGVGLHVAQRLVHDGYGVTVIESSPQLINSVNDKIDAKIIEGNAMELAC
CCCEEEEEEECCHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCCCCEEEECCCCEEEHH
WKRAKAETMDLMIAVTNEDSVNMIASIIADRFGIPRKIARVRSPEYGYENSFLNKSDFKI
HHHCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCEE
DLVIHPEELVAQEMARLVMRASANDVVDIGEGEMKVVAMRVSQDSPVVNKTLKEIALLHN
EEEECCHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHC
DFQFKIVAVARGIATIIPGDDDTILTNDQIFIMLNGKNLSRLMNLMNVREQSIHKVMIVG
CCEEEEEEEECCCEEEECCCCCEEEECCEEEEEECCCCHHHHHHHHHHHHHHHCEEEEEE
GGMVGARVAKLLGKTVKITLIENDKEHAEELASSLNNTDVLLGDGTDVNVMVLGGLMEMD
CCHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHCCCCEEEEECCCCEEEEEECCHHHHH
SFIATTGNNETNIISCLLAKHIMNRTNVDANATVGKTIALVKKEDYLVLASTIGLDVALN
HHEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEEECCEEEEEC
KKISAADEIMKFIRMGELFSLAHLHGVDAEVIELAASPRSQITKKPLKKMRTMLQDKQIL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEE
IAGVVRDGLCELTDEHTVIEPNDLAVVVSATKSLKDARELFN
EEEHHHCCHHHCCCCCEEECCCCCEEEEECHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7948029; 9720051 [H]