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The map label for this gene is 189499004

Identifier: 189499004

GI number: 189499004

Start: 4109

End: 4402

Strand: Direct

Name: 189499004

Synonym: Cphamn1_0004

Alternate gene names: NA

Gene position: 4109-4402 (Clockwise)

Preceding gene: 189499003

Following gene: 189499005

Centisome position: 0.15

GC content: 41.5

Gene sequence:

>294_bases
GTGAAATCATCCAGGACACCACGAAAAATCACTGATATCGTAGATGATATCTATTCAATCTACGGTATGAATCAGGCGAA
GGAAGAGCATCAGGCATTGCGGGTCTGGAACCATATTGTAGGCGATACCATTGCAAAGATGACGGAAGTGGAAAAATTTG
TTCAGGGGGTGCTCTTTGTACATGTCATGAATCCTTCATGGAGGACGGAACTCTCTTTCCGGAAAAAAAATATTATCAGC
AGGCTTAATAAGGCTCTCGGGAAAAATCTGGTTAAGGATATCGTTTTCAAATGA

Upstream 100 bases:

>100_bases
CACTCCTGAAGAGCAAGATTTCCTGACCGTATCGGTGATGTACAAACAACGAGTTCTTCCTACAGTCATAAGCTCAATTG
ATGAAAACCGGGAATACGTA

Downstream 100 bases:

>100_bases
TAAGGAGGAGTTTATAGTTTTATTGATCCGGTTGTCATAAAGTCGTATTATTGGTGTGTTGCAGGATTTGAATAATAACG
ATCAGTCAACGAAGCGCATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MKSSRTPRKITDIVDDIYSIYGMNQAKEEHQALRVWNHIVGDTIAKMTEVEKFVQGVLFVHVMNPSWRTELSFRKKNIIS
RLNKALGKNLVKDIVFK

Sequences:

>Translated_97_residues
MKSSRTPRKITDIVDDIYSIYGMNQAKEEHQALRVWNHIVGDTIAKMTEVEKFVQGVLFVHVMNPSWRTELSFRKKNIIS
RLNKALGKNLVKDIVFK
>Mature_97_residues
MKSSRTPRKITDIVDDIYSIYGMNQAKEEHQALRVWNHIVGDTIAKMTEVEKFVQGVLFVHVMNPSWRTELSFRKKNIIS
RLNKALGKNLVKDIVFK

Specific function: Unknown

COG id: COG5512

COG function: function code R; Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11302; Mature: 11302

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSRTPRKITDIVDDIYSIYGMNQAKEEHQALRVWNHIVGDTIAKMTEVEKFVQGVLFV
CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HVMNPSWRTELSFRKKNIISRLNKALGKNLVKDIVFK
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSSRTPRKITDIVDDIYSIYGMNQAKEEHQALRVWNHIVGDTIAKMTEVEKFVQGVLFV
CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HVMNPSWRTELSFRKKNIISRLNKALGKNLVKDIVFK
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA