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The map label for this gene is soxC [H]

Identifier: 189353878

GI number: 189353878

Start: 2185609

End: 2186820

Strand: Reverse

Name: soxC [H]

Synonym: BMULJ_05130

Alternate gene names: 189353878

Gene position: 2186820-2185609 (Counterclockwise)

Preceding gene: 189353879

Following gene: 189353875

Centisome position: 88.42

GC content: 71.04

Gene sequence:

>1212_bases
ATGAACGATCCACGCGGCCCGGCGACGCTTGCGCGCGACGACGATTCGCCGGCGATCGACCGCGATGCGCTCGCGCGCAC
GATCGACGCGCTGCGCGACACGGCGGCCGTACGCGACCGCGCGGGCGGGCATGCGGCGCGCGAGAAGCAATGGCTCGCCG
ACGCCGGCTTGCTGACGCTCGCGGTACCGCGCGCATTCGGCGGGCGCGGCGCCGAGTGGCCGGCGATCTACGAGGCGATT
CGGCAGATCGCGCGTGTCGACAGCGCGCTCGCGCATCTGGTCGGGTTCCAGTGCCTGCAGGTCGTCAGCATCGACGTGTG
GGGCAACGCCGCGCAGCGCGAACGCTATCTGCGCGGCACGGTCGAGCATCGCTGGTGGTGGGGCAATGCGGTCAATCCAC
TCGACACACGGCTCGTCGCGACCGCGACGCGCGACGGCGGCTACCGGCTCGACGGCGTGAAGGGGTTTTGCTCGGGCACG
CGCGGCTCGCAGCGCATGACGGTGTCCGCGCAGGATCGCGATACCGGGCGCACCGTGTTCGGCGTCGTGCCGACCGATCG
CGATGGCATCACCGTCAACGACGATTGGGATCCGATCGGGCAGCGTCAGACCGACAGCGGCAGCGTGCGCTTCGACGCGG
TGACGCTCGCGCCCGACGAAGTGCTGCACCGCTCGGAGTCGCCGCCGACGCCGCGTGCGACGCTACGCACGCTGGTGTCG
CAACTCGTGCTGACGAACCTGTTCGTCGGGCTCGCCGAAGGCGCGCTCGAGGCCGCTCGCGATTACGTGCTGCAGCACGG
GCGGCCGTGGATTCACGCGGACGTCGCGCACGCGAGCGACGATCCGTATACGCTGCAGCGTTTCGGCGACATGCGCGTGC
AGGCGGTGGCCGCGGCATCGCTTGCCGACCGCGCGGCACACGCCCTTCAGCATGCATGGGTGCAGCACGACGCGCTGGGT
GCCGATGCGCGTGCGGAAGTCGCGCTCGCCGTATCGGAAGCGAAGATCGTCGCGCAGCGCGCGGCGCTCGCGAACGGCGA
AGCGCTATTCGACGCATGCGGCGCACGCGCGACGGGCGCGTCGCTCGCGCTCGACCGCTTCTGGCGCAATGCGCGCACGC
ATACGCTGCACGATCCGCTCGATTATCGGCTGCGGGACGTCGGCCGGTTCGCGCTGACGGGCGCGTTGCCGCAGGCGTCG
CTCTATACGTGA

Upstream 100 bases:

>100_bases
GGCGCGAAATGCTGTCGCGGCTGACGGGCCGACGTCTGGACGCGCTCGTGCCGTTGTCGCGCGATAGCGTCGGTCAGGAA
CACGATCGGGAAGTCGTCGC

Downstream 100 bases:

>100_bases
CGATGCGAGCGGCGCCGTCGCGCGCGCGTCAGGTCGCGGGCAAGGCGTCGGCCAGCGCGCGCATCGCGTCGGCCGTCTGC
GCATTTGCCGGAAAGAACGC

Product: putative acyl-CoA dehydrogenase family protein

Products: NA

Alternate protein names: DBT sulfur dioxygenase [H]

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MNDPRGPATLARDDDSPAIDRDALARTIDALRDTAAVRDRAGGHAAREKQWLADAGLLTLAVPRAFGGRGAEWPAIYEAI
RQIARVDSALAHLVGFQCLQVVSIDVWGNAAQRERYLRGTVEHRWWWGNAVNPLDTRLVATATRDGGYRLDGVKGFCSGT
RGSQRMTVSAQDRDTGRTVFGVVPTDRDGITVNDDWDPIGQRQTDSGSVRFDAVTLAPDEVLHRSESPPTPRATLRTLVS
QLVLTNLFVGLAEGALEAARDYVLQHGRPWIHADVAHASDDPYTLQRFGDMRVQAVAAASLADRAAHALQHAWVQHDALG
ADARAEVALAVSEAKIVAQRAALANGEALFDACGARATGASLALDRFWRNARTHTLHDPLDYRLRDVGRFALTGALPQAS
LYT

Sequences:

>Translated_403_residues
MNDPRGPATLARDDDSPAIDRDALARTIDALRDTAAVRDRAGGHAAREKQWLADAGLLTLAVPRAFGGRGAEWPAIYEAI
RQIARVDSALAHLVGFQCLQVVSIDVWGNAAQRERYLRGTVEHRWWWGNAVNPLDTRLVATATRDGGYRLDGVKGFCSGT
RGSQRMTVSAQDRDTGRTVFGVVPTDRDGITVNDDWDPIGQRQTDSGSVRFDAVTLAPDEVLHRSESPPTPRATLRTLVS
QLVLTNLFVGLAEGALEAARDYVLQHGRPWIHADVAHASDDPYTLQRFGDMRVQAVAAASLADRAAHALQHAWVQHDALG
ADARAEVALAVSEAKIVAQRAALANGEALFDACGARATGASLALDRFWRNARTHTLHDPLDYRLRDVGRFALTGALPQAS
LYT
>Mature_403_residues
MNDPRGPATLARDDDSPAIDRDALARTIDALRDTAAVRDRAGGHAAREKQWLADAGLLTLAVPRAFGGRGAEWPAIYEAI
RQIARVDSALAHLVGFQCLQVVSIDVWGNAAQRERYLRGTVEHRWWWGNAVNPLDTRLVATATRDGGYRLDGVKGFCSGT
RGSQRMTVSAQDRDTGRTVFGVVPTDRDGITVNDDWDPIGQRQTDSGSVRFDAVTLAPDEVLHRSESPPTPRATLRTLVS
QLVLTNLFVGLAEGALEAARDYVLQHGRPWIHADVAHASDDPYTLQRFGDMRVQAVAAASLADRAAHALQHAWVQHDALG
ADARAEVALAVSEAKIVAQRAALANGEALFDACGARATGASLALDRFWRNARTHTLHDPLDYRLRDVGRFALTGALPQAS
LYT

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. Sulfur dioxygenase which converts DBT to DBT-sulfone (DBTO2 or DBT 5,5-dioxide) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013107
- InterPro:   IPR006092
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 43739; Mature: 43739

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDPRGPATLARDDDSPAIDRDALARTIDALRDTAAVRDRAGGHAAREKQWLADAGLLTL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHEE
AVPRAFGGRGAEWPAIYEAIRQIARVDSALAHLVGFQCLQVVSIDVWGNAAQRERYLRGT
ECCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHCC
VEHRWWWGNAVNPLDTRLVATATRDGGYRLDGVKGFCSGTRGSQRMTVSAQDRDTGRTVF
CCCEEEECCCCCCHHCEEEEEEECCCCEEECCCHHHCCCCCCCCEEEEECCCCCCCCEEE
GVVPTDRDGITVNDDWDPIGQRQTDSGSVRFDAVTLAPDEVLHRSESPPTPRATLRTLVS
EEECCCCCCEEECCCCCCCCCCCCCCCCEEEEEEEECHHHHHHCCCCCCCHHHHHHHHHH
QLVLTNLFVGLAEGALEAARDYVLQHGRPWIHADVAHASDDPYTLQRFGDMRVQAVAAAS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCHHHHHHHHHH
LADRAAHALQHAWVQHDALGADARAEVALAVSEAKIVAQRAALANGEALFDACGARATGA
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHCCCCCCH
SLALDRFWRNARTHTLHDPLDYRLRDVGRFALTGALPQASLYT
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNDPRGPATLARDDDSPAIDRDALARTIDALRDTAAVRDRAGGHAAREKQWLADAGLLTL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHEE
AVPRAFGGRGAEWPAIYEAIRQIARVDSALAHLVGFQCLQVVSIDVWGNAAQRERYLRGT
ECCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHCC
VEHRWWWGNAVNPLDTRLVATATRDGGYRLDGVKGFCSGTRGSQRMTVSAQDRDTGRTVF
CCCEEEECCCCCCHHCEEEEEEECCCCEEECCCHHHCCCCCCCCEEEEECCCCCCCCEEE
GVVPTDRDGITVNDDWDPIGQRQTDSGSVRFDAVTLAPDEVLHRSESPPTPRATLRTLVS
EEECCCCCCEEECCCCCCCCCCCCCCCCEEEEEEEECHHHHHHCCCCCCCHHHHHHHHHH
QLVLTNLFVGLAEGALEAARDYVLQHGRPWIHADVAHASDDPYTLQRFGDMRVQAVAAAS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCHHHHHHHHHH
LADRAAHALQHAWVQHDALGADARAEVALAVSEAKIVAQRAALANGEALFDACGARATGA
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHCCCCCCH
SLALDRFWRNARTHTLHDPLDYRLRDVGRFALTGALPQASLYT
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]