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The map label for this gene is fucU [H]

Identifier: 189353865

GI number: 189353865

Start: 2171294

End: 2171749

Strand: Reverse

Name: fucU [H]

Synonym: BMULJ_05117

Alternate gene names: 189353865

Gene position: 2171749-2171294 (Counterclockwise)

Preceding gene: 189353866

Following gene: 189353864

Centisome position: 87.81

GC content: 68.64

Gene sequence:

>456_bases
ATGCTGAAGAACCTCGATCCGCTGTTGCACGCCGACATCCTCCACACGCTGCGCGCGATGGGCCACGGCGACGAAGTGGC
GATCTGCGATGCGAATTTTCCGGCCGAATCGGTCGCGCAGCATACGGTCGTCGGCCGCGCGCTGCGGATCGACGGCGCCG
ATTCCGCGCGTGTCGTGCGTGCGGTGCTGTCCGTGCTGCCGCTCGACACGTTCGTCGAGACGGCCGCGTGGCGCATGGAG
GTCGTCGGCGATCCGGCCGCGCTGCCGCCCGTGCAGCGCGAGGTGCAGGCCGAGATCGACCGCGCGGAAGGACGCGCGGT
GCCGCTCGCCGGCATCGACCGCTTCGCGTTCTACGAACGTGCGCAGCACGCGTACGCCGTGATCGTCACCGGCGAACTGC
GCGGCTACGGCTGCTTCCTGTTCAAGAAAGGCGTGTTGTTGAGCGACGCCGGCTAA

Upstream 100 bases:

>100_bases
AATGCCGGCTGCGGCGGCGTAACGCGCATCGCGGCATGCGCAGCGCGCGCCGGGATCGGGTAACGTTATGCGGTTCGTTC
CCGCTCCCGGAGCTCCCGAC

Downstream 100 bases:

>100_bases
ACACGCGCGGCGGGCCGCGTCGCGCGCCGCCATGTAAAGTTTTGCTACAACTCTTGGACGACGCGCACGGACGCTCTATG
CTGGCCCATTTGCCGCGCGC

Product: fucose operon FucU protein

Products: NA

Alternate protein names: Fucose 1-epimerase; Type-2 mutarotase [H]

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MLKNLDPLLHADILHTLRAMGHGDEVAICDANFPAESVAQHTVVGRALRIDGADSARVVRAVLSVLPLDTFVETAAWRME
VVGDPAALPPVQREVQAEIDRAEGRAVPLAGIDRFAFYERAQHAYAVIVTGELRGYGCFLFKKGVLLSDAG

Sequences:

>Translated_151_residues
MLKNLDPLLHADILHTLRAMGHGDEVAICDANFPAESVAQHTVVGRALRIDGADSARVVRAVLSVLPLDTFVETAAWRME
VVGDPAALPPVQREVQAEIDRAEGRAVPLAGIDRFAFYERAQHAYAVIVTGELRGYGCFLFKKGVLLSDAG
>Mature_151_residues
MLKNLDPLLHADILHTLRAMGHGDEVAICDANFPAESVAQHTVVGRALRIDGADSARVVRAVLSVLPLDTFVETAAWRME
VVGDPAALPPVQREVQAEIDRAEGRAVPLAGIDRFAFYERAQHAYAVIVTGELRGYGCFLFKKGVLLSDAG

Specific function: Involved in the anomeric conversion of L-fucose [H]

COG id: COG4154

COG function: function code G; Fucose dissimilation pathway protein FucU

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rbsD / fucU family. FucU mutarotase subfamily [H]

Homologues:

Organism=Homo sapiens, GI148596947, Length=148, Percent_Identity=43.2432432432432, Blast_Score=107, Evalue=3e-24,
Organism=Homo sapiens, GI148596951, Length=133, Percent_Identity=42.8571428571429, Blast_Score=95, Evalue=3e-20,
Organism=Escherichia coli, GI1789169, Length=152, Percent_Identity=35.5263157894737, Blast_Score=94, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007721 [H]

Pfam domain/function: PF05025 RbsD_FucU [H]

EC number: NA

Molecular weight: Translated: 16318; Mature: 16318

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNLDPLLHADILHTLRAMGHGDEVAICDANFPAESVAQHTVVGRALRIDGADSARVVR
CCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHEEEECCCCHHHHHH
AVLSVLPLDTFVETAAWRMEVVGDPAALPPVQREVQAEIDRAEGRAVPLAGIDRFAFYER
HHHHHCCHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCCCEECCCCCHHHHHHHH
AQHAYAVIVTGELRGYGCFLFKKGVLLSDAG
CCCEEEEEEEECCCCEEEEEEECCEEEECCC
>Mature Secondary Structure
MLKNLDPLLHADILHTLRAMGHGDEVAICDANFPAESVAQHTVVGRALRIDGADSARVVR
CCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHEEEECCCCHHHHHH
AVLSVLPLDTFVETAAWRMEVVGDPAALPPVQREVQAEIDRAEGRAVPLAGIDRFAFYER
HHHHHCCHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCCCEECCCCCHHHHHHHH
AQHAYAVIVTGELRGYGCFLFKKGVLLSDAG
CCCEEEEEEEECCCCEEEEEEECCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA